RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 SMIM5Q71RC9 77 aa32.22■■■□□ 2.75
ATPAF1-202ENST00000371937 EAF2Q96CJ1 260 aaPredicted RBP32.22■■■□□ 2.75
ATPAF1-202ENST00000371937 BCL2L12Q9HB09 334 aa32.22■■■□□ 2.75
ATPAF1-202ENST00000371937 TFCP2Q12800 502 aa32.21■■■□□ 2.75
ATPAF1-202ENST00000371937 TXNRD1Q16881 649 aa32.21■■■□□ 2.75
ATPAF1-202ENST00000371937 TAF7LQ5H9L4 462 aa32.21■■■□□ 2.75
ATPAF1-202ENST00000371937 ECHDC1Q9NTX5 307 aa32.21■■■□□ 2.75
ATPAF1-202ENST00000371937 CASC1Q6TDU7 716 aa32.21■■■□□ 2.75
ATPAF1-202ENST00000371937 ATG9AQ7Z3C6 839 aa32.21■■■□□ 2.75
ATPAF1-202ENST00000371937 PI4K2BQ8TCG2 481 aa32.21■■■□□ 2.75
ATPAF1-202ENST00000371937 SRP68Q9UHB9 627 aaKnown RBP32.21■■■□□ 2.75
ATPAF1-202ENST00000371937 ZNF594Q96JF6 807 aaPredicted RBP32.2■■■□□ 2.75
ATPAF1-202ENST00000371937 ANKRD18BA2A2Z9 1011 aa32.19■■■□□ 2.74
ATPAF1-202ENST00000371937 GLRX3O76003 335 aaKnown RBP32.19■■■□□ 2.74
ATPAF1-202ENST00000371937 AMIGO3Q86WK7 504 aa32.19■■■□□ 2.74
ATPAF1-202ENST00000371937 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.19■■■□□ 2.74
ATPAF1-202ENST00000371937 APBA3O96018 575 aa32.19■■■□□ 2.74
ATPAF1-202ENST00000371937 ITGA6P23229 1130 aa32.19■■■□□ 2.74
ATPAF1-202ENST00000371937 TBC1D9BQ66K14 1250 aa32.19■■■□□ 2.74
ATPAF1-202ENST00000371937 CCDC85AQ96PX6 553 aaPredicted RBP32.19■■■□□ 2.74
ATPAF1-202ENST00000371937 GREM2Q9H772 168 aa32.19■■■□□ 2.74
ATPAF1-202ENST00000371937 PHF14O94880 888 aa32.18■■■□□ 2.74
ATPAF1-202ENST00000371937 TNNI3KQ59H18 835 aa32.18■■■□□ 2.74
ATPAF1-202ENST00000371937 SETDB2Q96T68 719 aa32.18■■■□□ 2.74
ATPAF1-202ENST00000371937 GPR108Q9NPR9 543 aa32.18■■■□□ 2.74
ATPAF1-202ENST00000371937 FPGT-TNNI3KV9GXZ4 949 aa32.18■■■□□ 2.74
ATPAF1-202ENST00000371937 HCLS1P14317 486 aaPredicted RBP32.17■■■□□ 2.74
ATPAF1-202ENST00000371937 TRIM6-TRIM34B2RNG4 842 aa32.16■■■□□ 2.74
ATPAF1-202ENST00000371937 MFAP1P55081 439 aaKnown RBP32.16■■■□□ 2.74
ATPAF1-202ENST00000371937 PROM2Q8N271 834 aa32.16■■■□□ 2.74
ATPAF1-202ENST00000371937 NYXQ9GZU5 481 aa32.16■■■□□ 2.74
ATPAF1-202ENST00000371937 CCDC8Q9H0W5 538 aaPredicted RBP32.16■■■□□ 2.74
ATPAF1-202ENST00000371937 SSFA2P28290 1259 aa32.16■■■□□ 2.74
ATPAF1-202ENST00000371937 LRRC24Q50LG9 513 aa32.16■■■□□ 2.74
ATPAF1-202ENST00000371937 BICDL1Q6ZP65 573 aa32.15■■■□□ 2.74
ATPAF1-202ENST00000371937 TUBGCP6Q96RT7 1819 aa32.15■■■□□ 2.74
ATPAF1-202ENST00000371937 C4AP0C0L4 1744 aa32.14■■■□□ 2.74
ATPAF1-202ENST00000371937 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.14■■■□□ 2.74
ATPAF1-202ENST00000371937 RILPL2Q969X0 211 aa32.14■■■□□ 2.74
ATPAF1-202ENST00000371937 UBR3Q6ZT12 1888 aa32.13■■■□□ 2.73
ATPAF1-202ENST00000371937 LAMB2P55268 1798 aa32.13■■■□□ 2.73
ATPAF1-202ENST00000371937 CCDC152Q4G0S7 254 aa32.13■■■□□ 2.73
ATPAF1-202ENST00000371937 PUS3Q9BZE2 481 aaKnown RBP32.13■■■□□ 2.73
ATPAF1-202ENST00000371937 CEP126Q9P2H0 1117 aa32.13■■■□□ 2.73
ATPAF1-202ENST00000371937 GTF2E1P29083 439 aaPredicted RBP32.12■■■□□ 2.73
ATPAF1-202ENST00000371937 DDX60Q8IY21 1712 aaKnown RBP32.12■■■□□ 2.73
ATPAF1-202ENST00000371937 LDHAL6AQ6ZMR3 332 aa32.12■■■□□ 2.73
ATPAF1-202ENST00000371937 TBC1D32Q96NH3 1257 aa32.12■■■□□ 2.73
ATPAF1-202ENST00000371937 CNTROBQ8N137 903 aa32.11■■■□□ 2.73
ATPAF1-202ENST00000371937 TLR7Q9NYK1 1049 aaKnown RBP32.11■■■□□ 2.73
ATPAF1-202ENST00000371937 RTL9Q8NET4 1388 aa32.11■■■□□ 2.73
ATPAF1-202ENST00000371937 ERFEQ4G0M1 354 aa32.1■■■□□ 2.73
ATPAF1-202ENST00000371937 SLC10A5Q5PT55 438 aa32.1■■■□□ 2.73
ATPAF1-202ENST00000371937 TPTE2Q6XPS3 522 aa32.1■■■□□ 2.73
ATPAF1-202ENST00000371937 NBPF5PQ86XG9 351 aaPredicted RBP32.1■■■□□ 2.73
ATPAF1-202ENST00000371937 DBNLQ9UJU6 430 aaKnown RBP32.09■■■□□ 2.73
ATPAF1-202ENST00000371937 AKAP2Q9Y2D5 859 aa32.09■■■□□ 2.73
ATPAF1-202ENST00000371937 COL24A1Q17RW2 1714 aa32.09■■■□□ 2.73
ATPAF1-202ENST00000371937 C22orf23Q9BZE7 217 aa32.08■■■□□ 2.73
ATPAF1-202ENST00000371937 CNNM1Q9NRU3 951 aa32.08■■■□□ 2.73
ATPAF1-202ENST00000371937 RIPOR2Q9Y4F9 1068 aa32.08■■■□□ 2.73
ATPAF1-202ENST00000371937 NEUROD6Q96NK8 337 aa32.05■■■□□ 2.72
ATPAF1-202ENST00000371937 CARMIL3Q8ND23 1372 aa32.05■■■□□ 2.72
ATPAF1-202ENST00000371937 ATP5JP18859 108 aa32.05■■■□□ 2.72
ATPAF1-202ENST00000371937 SF3B3Q15393 1217 aaKnown RBP32.05■■■□□ 2.72
ATPAF1-202ENST00000371937 DDRGK1Q96HY6 314 aa32.05■■■□□ 2.72
ATPAF1-202ENST00000371937 IPO9Q96P70 1041 aaKnown RBP32.05■■■□□ 2.72
ATPAF1-202ENST00000371937 DBNDD2Q9BQY9 259 aa32.05■■■□□ 2.72
ATPAF1-202ENST00000371937 ZNF609O15014 1411 aa32.04■■■□□ 2.72
ATPAF1-202ENST00000371937 TNS1Q9HBL0 1735 aaKnown RBP32.04■■■□□ 2.72
ATPAF1-202ENST00000371937 MAP4K4O95819 1239 aaPredicted RBP32.04■■■□□ 2.72
ATPAF1-202ENST00000371937 METTL24Q5JXM2 366 aa32.04■■■□□ 2.72
ATPAF1-202ENST00000371937 CHMLP26374 656 aa32.03■■■□□ 2.72
ATPAF1-202ENST00000371937 EVI5LQ96CN4 794 aa32.03■■■□□ 2.72
ATPAF1-202ENST00000371937 RGPD3A6NKT7 1758 aaPredicted RBP32.03■■■□□ 2.72
ATPAF1-202ENST00000371937 RGPD4Q7Z3J3 1758 aa32.03■■■□□ 2.72
ATPAF1-202ENST00000371937 A0A1B0GUL7 405 aa32.03■■■□□ 2.72
ATPAF1-202ENST00000371937 TIMM10P62072 90 aa32.03■■■□□ 2.72
ATPAF1-202ENST00000371937 MPHOSPH8Q99549 860 aa32.03■■■□□ 2.72
ATPAF1-202ENST00000371937 TFCP2L1Q9NZI6 479 aa32.03■■■□□ 2.72
ATPAF1-202ENST00000371937 GYS1P13807 737 aa32.02■■■□□ 2.72
ATPAF1-202ENST00000371937 NFIXQ14938 502 aa32.02■■■□□ 2.72
ATPAF1-202ENST00000371937 MROH5Q6ZUA9 1318 aa32.01■■■□□ 2.72
ATPAF1-202ENST00000371937 AK9Q5TCS8 1911 aa32.01■■■□□ 2.72
ATPAF1-202ENST00000371937 REC8O95072 547 aa32.01■■■□□ 2.72
ATPAF1-202ENST00000371937 AKT1S1Q96B36 256 aa32.01■■■□□ 2.72
ATPAF1-202ENST00000371937 LRP5O75197 1615 aa32.01■■■□□ 2.71
ATPAF1-202ENST00000371937 IGHMBP2P38935 993 aaKnown RBP32■■■□□ 2.71
ATPAF1-202ENST00000371937 NLRP3Q96P20 1036 aa32■■■□□ 2.71
ATPAF1-202ENST00000371937 CDC5LQ99459 802 aaKnown RBP32■■■□□ 2.71
ATPAF1-202ENST00000371937 BOLA2Q9H3K6 86 aa32■■■□□ 2.71
ATPAF1-202ENST00000371937 SEC31BQ9NQW1 1179 aa32■■■□□ 2.71
ATPAF1-202ENST00000371937 RIC1Q4ADV7 1423 aa32■■■□□ 2.71
ATPAF1-202ENST00000371937 NPHP1O15259 732 aa31.99■■■□□ 2.71
ATPAF1-202ENST00000371937 RBM25P49756 843 aaKnown RBP31.99■■■□□ 2.71
ATPAF1-202ENST00000371937 ABCC12Q96J65 1359 aa31.99■■■□□ 2.71
ATPAF1-202ENST00000371937 FLAD1Q8NFF5 587 aa31.98■■■□□ 2.71
ATPAF1-202ENST00000371937 ESYT1Q9BSJ8 1104 aa31.98■■■□□ 2.71
ATPAF1-202ENST00000371937 PDE8BO95263 885 aa31.97■■■□□ 2.71
ATPAF1-202ENST00000371937 ZNF827Q17R98 1081 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms