RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 TMCO3Q6UWJ1 677 aa20.59■□□□□ 0.89
SNX27-203ENST00000368843 SYNCQ9H7C4 482 aa20.59■□□□□ 0.89
SNX27-203ENST00000368843 PABPN1LA6NDY0 278 aaKnown RBP20.59■□□□□ 0.89
SNX27-203ENST00000368843 FBLN1P23142 703 aa20.59■□□□□ 0.89
SNX27-203ENST00000368843 PKNOX2Q96KN3 472 aa20.59■□□□□ 0.89
SNX27-203ENST00000368843 ALS2CR12Q96Q35 445 aa20.59■□□□□ 0.89
SNX27-203ENST00000368843 TNRQ92752 1358 aa20.59■□□□□ 0.89
SNX27-203ENST00000368843 SLC39A6Q13433 755 aa20.59■□□□□ 0.89
SNX27-203ENST00000368843 ZNF804AQ7Z570 1209 aa20.59■□□□□ 0.89
SNX27-203ENST00000368843 NLRP3Q96P20 1036 aa20.58■□□□□ 0.89
SNX27-203ENST00000368843 TMC6Q7Z403 805 aa20.58■□□□□ 0.89
SNX27-203ENST00000368843 INCENPQ9NQS7 918 aa20.58■□□□□ 0.89
SNX27-203ENST00000368843 SSFA2P28290 1259 aa20.58■□□□□ 0.88
SNX27-203ENST00000368843 RBM25P49756 843 aaKnown RBP20.58■□□□□ 0.88
SNX27-203ENST00000368843 XAGE3Q8WTP9 111 aa20.58■□□□□ 0.88
SNX27-203ENST00000368843 SCAF11Q99590 1463 aaKnown RBP20.58■□□□□ 0.88
SNX27-203ENST00000368843 MCM5P33992 734 aa20.57■□□□□ 0.88
SNX27-203ENST00000368843 HOMER2Q9NSB8 354 aa20.57■□□□□ 0.88
SNX27-203ENST00000368843 UTP14AQ9BVJ6 771 aaKnown RBP20.57■□□□□ 0.88
SNX27-203ENST00000368843 KRT23Q9C075 422 aa20.57■□□□□ 0.88
SNX27-203ENST00000368843 PARP3Q9Y6F1 533 aa20.57■□□□□ 0.88
SNX27-203ENST00000368843 NF2P35240 595 aa20.57■□□□□ 0.88
SNX27-203ENST00000368843 TAOK3Q9H2K8 898 aa20.57■□□□□ 0.88
SNX27-203ENST00000368843 STX1AQ16623 288 aa20.57■□□□□ 0.88
SNX27-203ENST00000368843 ERMNQ8TAM6 284 aa20.57■□□□□ 0.88
SNX27-203ENST00000368843 DDB1Q16531 1140 aa20.57■□□□□ 0.88
SNX27-203ENST00000368843 LRRC27Q9C0I9 530 aa20.56■□□□□ 0.88
SNX27-203ENST00000368843 TFCP2L1Q9NZI6 479 aa20.56■□□□□ 0.88
SNX27-203ENST00000368843 HLTFQ14527 1009 aaKnown RBP eCLIP20.56■□□□□ 0.88
SNX27-203ENST00000368843 FERMT1Q9BQL6 677 aa20.56■□□□□ 0.88
SNX27-203ENST00000368843 MCM3P25205 808 aa20.56■□□□□ 0.88
SNX27-203ENST00000368843 NAA16Q6N069 864 aaPredicted RBP20.56■□□□□ 0.88
SNX27-203ENST00000368843 CALM1P0DP23 149 aa20.56■□□□□ 0.88
SNX27-203ENST00000368843 CALM2P0DP24 149 aa20.56■□□□□ 0.88
SNX27-203ENST00000368843 CALM3P0DP25 149 aa20.56■□□□□ 0.88
SNX27-203ENST00000368843 POLD1P28340 1107 aa20.56■□□□□ 0.88
SNX27-203ENST00000368843 RNF187Q5TA31 235 aaPredicted RBP20.56■□□□□ 0.88
SNX27-203ENST00000368843 PYM1Q9BRP8 204 aaKnown RBP20.56■□□□□ 0.88
SNX27-203ENST00000368843 RIMBP2O15034 1052 aa20.55■□□□□ 0.88
SNX27-203ENST00000368843 PHACTR2O75167 634 aa20.55■□□□□ 0.88
SNX27-203ENST00000368843 STX6O43752 255 aa20.55■□□□□ 0.88
SNX27-203ENST00000368843 KIF18AQ8NI77 898 aa20.55■□□□□ 0.88
SNX27-203ENST00000368843 TBC1D9Q6ZT07 1266 aa20.55■□□□□ 0.88
SNX27-203ENST00000368843 NYXQ9GZU5 481 aa20.55■□□□□ 0.88
SNX27-203ENST00000368843 KLF18A0A0U1RQI7 1052 aa20.55■□□□□ 0.88
SNX27-203ENST00000368843 PDCL2Q8N4E4 241 aa20.55■□□□□ 0.88
SNX27-203ENST00000368843 SHTN1A0MZ66 631 aa20.55■□□□□ 0.88
SNX27-203ENST00000368843 TBC1D5Q92609 795 aa20.55■□□□□ 0.88
SNX27-203ENST00000368843 NSD2O96028 1365 aa20.54■□□□□ 0.88
SNX27-203ENST00000368843 TRIM47Q96LD4 638 aa20.54■□□□□ 0.88
SNX27-203ENST00000368843 KIF2AO00139 706 aaPredicted RBP20.54■□□□□ 0.88
SNX27-203ENST00000368843 STAT6P42226 847 aa20.54■□□□□ 0.88
SNX27-203ENST00000368843 GRIPAP1Q4V328 841 aa20.54■□□□□ 0.88
SNX27-203ENST00000368843 SIRT1Q96EB6 747 aa20.54■□□□□ 0.88
SNX27-203ENST00000368843 LAMC3Q9Y6N6 1575 aa20.54■□□□□ 0.88
SNX27-203ENST00000368843 MRPS9P82933 396 aaKnown RBP20.54■□□□□ 0.88
SNX27-203ENST00000368843 ATP2B3Q16720 1220 aa20.54■□□□□ 0.88
SNX27-203ENST00000368843 COPS6Q7L5N1 327 aa20.54■□□□□ 0.88
SNX27-203ENST00000368843 LRRC2Q9BYS8 371 aa20.54■□□□□ 0.88
SNX27-203ENST00000368843 HMG20BQ9P0W2 317 aa20.54■□□□□ 0.88
SNX27-203ENST00000368843 GRIN2AQ12879 1464 aa20.54■□□□□ 0.88
SNX27-203ENST00000368843 KANK3Q6NY19 840 aa20.54■□□□□ 0.88
SNX27-203ENST00000368843 SMARCC2Q8TAQ2 1214 aa20.54■□□□□ 0.88
SNX27-203ENST00000368843 CABLES1Q8TDN4 633 aa20.53■□□□□ 0.88
SNX27-203ENST00000368843 AFMP43652 599 aa20.53■□□□□ 0.88
SNX27-203ENST00000368843 RBM27Q9P2N5 1060 aaKnown RBP20.53■□□□□ 0.88
SNX27-203ENST00000368843 SMARCC1Q92922 1105 aaPredicted RBP20.53■□□□□ 0.88
SNX27-203ENST00000368843 MAGEB6P1A0A0J9YX57 407 aa20.53■□□□□ 0.88
SNX27-203ENST00000368843 DDX19AQ9NUU7 478 aaKnown RBP20.53■□□□□ 0.88
SNX27-203ENST00000368843 SSX2IPQ9Y2D8 614 aa20.53■□□□□ 0.88
SNX27-203ENST00000368843 ZBTB43O43298 467 aa20.52■□□□□ 0.88
SNX27-203ENST00000368843 RTN1Q16799 776 aa20.52■□□□□ 0.88
SNX27-203ENST00000368843 HSP90AA4PQ58FG1 418 aa20.52■□□□□ 0.88
SNX27-203ENST00000368843 RGS22Q8NE09 1264 aa20.52■□□□□ 0.88
SNX27-203ENST00000368843 ESR2Q92731 530 aa20.52■□□□□ 0.88
SNX27-203ENST00000368843 TSNARE1Q96NA8 513 aa20.52■□□□□ 0.88
SNX27-203ENST00000368843 PPIP5K1Q6PFW1 1433 aa20.52■□□□□ 0.88
SNX27-203ENST00000368843 SPECC1Q5M775 1068 aa20.52■□□□□ 0.88
SNX27-203ENST00000368843 DZIP3Q86Y13 1208 aaKnown RBP20.52■□□□□ 0.88
SNX27-203ENST00000368843 DHX29Q7Z478 1369 aaKnown RBP20.52■□□□□ 0.88
SNX27-203ENST00000368843 NPHP3Q7Z494 1330 aa20.52■□□□□ 0.88
SNX27-203ENST00000368843 DPH6Q7L8W6 267 aa20.52■□□□□ 0.88
SNX27-203ENST00000368843 GIGYF2Q6Y7W6 1299 aaKnown RBP20.52■□□□□ 0.88
SNX27-203ENST00000368843 FAM212AQ96EL1 285 aa20.52■□□□□ 0.88
SNX27-203ENST00000368843 NAPAP54920 295 aa20.52■□□□□ 0.88
SNX27-203ENST00000368843 RTCBQ9Y3I0 505 aaKnown RBP20.51■□□□□ 0.87
SNX27-203ENST00000368843 NAA15Q9BXJ9 866 aaKnown RBP20.51■□□□□ 0.87
SNX27-203ENST00000368843 TTC22Q5TAA0 569 aa20.51■□□□□ 0.87
SNX27-203ENST00000368843 ZSWIM4Q9H7M6 989 aa20.51■□□□□ 0.87
SNX27-203ENST00000368843 NBPF7P0C2Y1 421 aaPredicted RBP20.5■□□□□ 0.87
SNX27-203ENST00000368843 CCDC102BQ68D86 513 aa20.5■□□□□ 0.87
SNX27-203ENST00000368843 C16orf45Q96MC5 204 aaPredicted RBP20.5■□□□□ 0.87
SNX27-203ENST00000368843 ALG1Q9BT22 464 aa20.5■□□□□ 0.87
SNX27-203ENST00000368843 RRAGBQ5VZM2 374 aa20.5■□□□□ 0.87
SNX27-203ENST00000368843 USP25Q9UHP3 1055 aa20.5■□□□□ 0.87
SNX27-203ENST00000368843 CNNM2Q9H8M5 875 aa20.5■□□□□ 0.87
SNX27-203ENST00000368843 PPP4R3BQ5MIZ7 849 aa20.5■□□□□ 0.87
SNX27-203ENST00000368843 NECAB1Q8N987 351 aa20.5■□□□□ 0.87
SNX27-203ENST00000368843 C14orf93Q9H972 538 aaKnown RBP20.5■□□□□ 0.87
SNX27-203ENST00000368843 RMND1Q9NWS8 449 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms