RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 KIF3AQ9Y496 699 aa12.2□□□□□ -0.46
TPM3-209ENST00000368527 SPEF2Q9C093 1822 aa12.2□□□□□ -0.46
TPM3-209ENST00000368527 PALLDQ8WX93 1383 aa12.19□□□□□ -0.46
TPM3-209ENST00000368527 SH3TC1Q8TE82 1336 aa12.19□□□□□ -0.46
TPM3-209ENST00000368527 AFDNP55196 1824 aaKnown RBP12.19□□□□□ -0.46
TPM3-209ENST00000368527 F13A1P00488 732 aa12.19□□□□□ -0.46
TPM3-209ENST00000368527 PTH1RQ03431 593 aa12.19□□□□□ -0.46
TPM3-209ENST00000368527 CABLES1Q8TDN4 633 aa12.19□□□□□ -0.46
TPM3-209ENST00000368527 HELLSQ9NRZ9 838 aa12.19□□□□□ -0.46
TPM3-209ENST00000368527 SLAIN2Q9P270 581 aa12.19□□□□□ -0.46
TPM3-209ENST00000368527 KCPQ6ZWJ8 1503 aa12.19□□□□□ -0.46
TPM3-209ENST00000368527 SYT1P21579 422 aa12.18□□□□□ -0.46
TPM3-209ENST00000368527 RPS6KB1P23443 525 aa12.18□□□□□ -0.46
TPM3-209ENST00000368527 TFCP2Q12800 502 aa12.18□□□□□ -0.46
TPM3-209ENST00000368527 HSP90AB3PQ58FF7 597 aa12.18□□□□□ -0.46
TPM3-209ENST00000368527 CCDC183Q5T5S1 534 aa12.18□□□□□ -0.46
TPM3-209ENST00000368527 KBTBD3Q8NAB2 608 aa12.18□□□□□ -0.46
TPM3-209ENST00000368527 SIL1Q9H173 461 aa12.18□□□□□ -0.46
TPM3-209ENST00000368527 BOLA2Q9H3K6 86 aa12.18□□□□□ -0.46
TPM3-209ENST00000368527 TSPY26PQ9H489 355 aa12.18□□□□□ -0.46
TPM3-209ENST00000368527 RTN4Q9NQC3 1192 aaKnown RBP12.18□□□□□ -0.46
TPM3-209ENST00000368527 AKAP2Q9Y2D5 859 aa12.18□□□□□ -0.46
TPM3-209ENST00000368527 TAF5LO75529 589 aa12.17□□□□□ -0.46
TPM3-209ENST00000368527 ZFYP08048 801 aaPredicted RBP12.17□□□□□ -0.46
TPM3-209ENST00000368527 MCMDC2Q4G0Z9 681 aa12.17□□□□□ -0.46
TPM3-209ENST00000368527 EPHA10Q5JZY3 1008 aa12.17□□□□□ -0.46
TPM3-209ENST00000368527 LMBR1LQ6UX01 489 aa12.17□□□□□ -0.46
TPM3-209ENST00000368527 NOL8Q76FK4 1167 aaKnown RBP12.17□□□□□ -0.46
TPM3-209ENST00000368527 PDLIM2Q96JY6 352 aa12.17□□□□□ -0.46
TPM3-209ENST00000368527 ARXQ96QS3 562 aa12.17□□□□□ -0.46
TPM3-209ENST00000368527 PLA2G12BQ9BX93 195 aa12.17□□□□□ -0.46
TPM3-209ENST00000368527 DBNLQ9UJU6 430 aaKnown RBP12.17□□□□□ -0.46
TPM3-209ENST00000368527 NUP188Q5SRE5 1749 aa12.17□□□□□ -0.46
TPM3-209ENST00000368527 XIRP1Q702N8 1843 aaKnown RBP12.16□□□□□ -0.46
TPM3-209ENST00000368527 ELP1O95163 1332 aa12.16□□□□□ -0.46
TPM3-209ENST00000368527 EYA2O00167 538 aa12.16□□□□□ -0.46
TPM3-209ENST00000368527 STARD3NLO95772 234 aa12.16□□□□□ -0.46
TPM3-209ENST00000368527 GJB2P29033 226 aa12.16□□□□□ -0.46
TPM3-209ENST00000368527 EVA1CP58658 441 aa12.16□□□□□ -0.46
TPM3-209ENST00000368527 FOXO4P98177 505 aa12.16□□□□□ -0.46
TPM3-209ENST00000368527 KIF6Q6ZMV9 814 aa12.16□□□□□ -0.46
TPM3-209ENST00000368527 ZSCAN30Q86W11 494 aa12.16□□□□□ -0.46
TPM3-209ENST00000368527 DDX17Q92841 729 aaKnown RBP12.16□□□□□ -0.46
TPM3-209ENST00000368527 FAM227BQ96M60 508 aa12.16□□□□□ -0.46
TPM3-209ENST00000368527 LLPHQ9BRT6 129 aaKnown RBP12.16□□□□□ -0.46
TPM3-209ENST00000368527 DSCC1Q9BVC3 393 aa12.16□□□□□ -0.46
TPM3-209ENST00000368527 TMOD3Q9NYL9 352 aa12.16□□□□□ -0.46
TPM3-209ENST00000368527 TMEM63CQ9P1W3 806 aa12.16□□□□□ -0.46
TPM3-209ENST00000368527 ABCA3Q99758 1704 aa12.16□□□□□ -0.46
TPM3-209ENST00000368527 A0A0D9SFI3 127 aa12.15□□□□□ -0.46
TPM3-209ENST00000368527 NBPF26B4DH59 902 aa12.15□□□□□ -0.46
TPM3-209ENST00000368527 NBPF14Q5TI25 921 aa12.15□□□□□ -0.46
TPM3-209ENST00000368527 NBPF10Q6P3W6 841 aaKnown RBP12.15□□□□□ -0.46
TPM3-209ENST00000368527 USP48Q86UV5 1035 aa12.15□□□□□ -0.46
TPM3-209ENST00000368527 CCDC83Q8IWF9 413 aa12.15□□□□□ -0.46
TPM3-209ENST00000368527 NBPF15Q8N660 670 aa12.15□□□□□ -0.46
TPM3-209ENST00000368527 ISCA1Q9BUE6 129 aa12.15□□□□□ -0.46
TPM3-209ENST00000368527 SCAND2PQ9GZW5 306 aaPredicted RBP12.15□□□□□ -0.46
TPM3-209ENST00000368527 TLR7Q9NYK1 1049 aaKnown RBP12.15□□□□□ -0.46
TPM3-209ENST00000368527 CCDC39Q9UFE4 941 aa12.15□□□□□ -0.46
TPM3-209ENST00000368527 MTMR6Q9Y217 621 aa12.15□□□□□ -0.46
TPM3-209ENST00000368527 LRP6O75581 1613 aa12.15□□□□□ -0.47
TPM3-209ENST00000368527 NHSL1Q5SYE7 1610 aa12.15□□□□□ -0.47
TPM3-209ENST00000368527 PCCAP05165 728 aaPredicted RBP12.14□□□□□ -0.47
TPM3-209ENST00000368527 MSNP26038 577 aaKnown RBP12.14□□□□□ -0.47
TPM3-209ENST00000368527 PRIM1P49642 420 aaKnown RBP12.14□□□□□ -0.47
TPM3-209ENST00000368527 KRT85P78386 507 aa12.14□□□□□ -0.47
TPM3-209ENST00000368527 TCIRG1Q13488 830 aa12.14□□□□□ -0.47
TPM3-209ENST00000368527 ATL3Q6DD88 541 aa12.14□□□□□ -0.47
TPM3-209ENST00000368527 RGS22Q8NE09 1264 aa12.14□□□□□ -0.47
TPM3-209ENST00000368527 NEK1Q96PY6 1258 aa12.14□□□□□ -0.47
TPM3-209ENST00000368527 RRAGDQ9NQL2 400 aaPredicted RBP12.14□□□□□ -0.47
TPM3-209ENST00000368527 PAG1Q9NWQ8 432 aa12.14□□□□□ -0.47
TPM3-209ENST00000368527 CEP126Q9P2H0 1117 aa12.14□□□□□ -0.47
TPM3-209ENST00000368527 CTNNA3Q9UI47 895 aa12.14□□□□□ -0.47
TPM3-209ENST00000368527 CDHR2Q9BYE9 1310 aa12.13□□□□□ -0.47
TPM3-209ENST00000368527 ZNF609O15014 1411 aa12.13□□□□□ -0.47
TPM3-209ENST00000368527 SYCE3A1L190 88 aa12.13□□□□□ -0.47
TPM3-209ENST00000368527 ATP5J2-PTCD1G3V325 749 aa12.13□□□□□ -0.47
TPM3-209ENST00000368527 PTCD1O75127 700 aaKnown RBP12.13□□□□□ -0.47
TPM3-209ENST00000368527 ME3Q16798 604 aa12.13□□□□□ -0.47
TPM3-209ENST00000368527 CCDC57Q2TAC2 916 aa12.13□□□□□ -0.47
TPM3-209ENST00000368527 ADCK5Q3MIX3 580 aa12.13□□□□□ -0.47
TPM3-209ENST00000368527 CCDC158Q5M9N0 1113 aa12.13□□□□□ -0.47
TPM3-209ENST00000368527 LARP1BQ659C4 914 aaKnown RBP12.13□□□□□ -0.47
TPM3-209ENST00000368527 AK7Q96M32 723 aa12.13□□□□□ -0.47
TPM3-209ENST00000368527 DBNDD2Q9BQY9 259 aa12.13□□□□□ -0.47
TPM3-209ENST00000368527 CDCA7Q9BWT1 371 aaPredicted RBP12.13□□□□□ -0.47
TPM3-209ENST00000368527 RBSNQ9H1K0 784 aa12.13□□□□□ -0.47
TPM3-209ENST00000368527 ZSCAN16Q9H4T2 348 aaPredicted RBP12.13□□□□□ -0.47
TPM3-209ENST00000368527 HSP90B1P14625 803 aaKnown RBP12.12□□□□□ -0.47
TPM3-209ENST00000368527 HMGN5P82970 282 aaKnown RBP12.12□□□□□ -0.47
TPM3-209ENST00000368527 ZMYM1Q5SVZ6 1142 aa12.12□□□□□ -0.47
TPM3-209ENST00000368527 FOXD4L5Q5VV16 416 aaPredicted RBP12.12□□□□□ -0.47
TPM3-209ENST00000368527 ZSCAN25Q6NSZ9 544 aa12.12□□□□□ -0.47
TPM3-209ENST00000368527 ATG9AQ7Z3C6 839 aa12.12□□□□□ -0.47
TPM3-209ENST00000368527 FBXL16Q8N461 479 aa12.12□□□□□ -0.47
TPM3-209ENST00000368527 FOXD4L4Q8WXT5 416 aaPredicted RBP12.12□□□□□ -0.47
TPM3-209ENST00000368527 CHMP3Q9Y3E7 222 aa12.12□□□□□ -0.47
TPM3-209ENST00000368527 TJP1Q07157 1748 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms