RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 MEIS3Q99687 375 aa12.5□□□□□ -0.41
PTPRK-205ENST00000368213 UPF3BQ9BZI7 483 aaKnown RBP12.5□□□□□ -0.41
PTPRK-205ENST00000368213 A1BGP04217 495 aa12.49□□□□□ -0.41
PTPRK-205ENST00000368213 CCDC150Q8NCX0 1101 aa12.49□□□□□ -0.41
PTPRK-205ENST00000368213 HOOK2Q96ED9 719 aa12.49□□□□□ -0.41
PTPRK-205ENST00000368213 MAGI2Q86UL8 1455 aa12.49□□□□□ -0.41
PTPRK-205ENST00000368213 IFIT1BQ5T764 474 aaKnown RBP12.49□□□□□ -0.41
PTPRK-205ENST00000368213 CCT2P78371 535 aaKnown RBP12.49□□□□□ -0.41
PTPRK-205ENST00000368213 WTAPQ15007 396 aa12.49□□□□□ -0.41
PTPRK-205ENST00000368213 DENND2AQ9ULE3 1009 aa12.49□□□□□ -0.41
PTPRK-205ENST00000368213 PLEKHG1Q9ULL1 1385 aa12.49□□□□□ -0.41
PTPRK-205ENST00000368213 HIBADHP31937 336 aaKnown RBP12.49□□□□□ -0.41
PTPRK-205ENST00000368213 NOM1Q5C9Z4 860 aaKnown RBP12.49□□□□□ -0.41
PTPRK-205ENST00000368213 SAMD9Q5K651 1589 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 PDE8AO60658 829 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 IARSP41252 1262 aaKnown RBP12.48□□□□□ -0.41
PTPRK-205ENST00000368213 GUCY1B3Q02153 619 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 PPFIBP1Q86W92 1011 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 RNF214Q8ND24 703 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 SH2D4AQ9H788 454 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 KDM6BO15054 1643 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 MAST3O60307 1309 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 ERVV-2B6SEH9 535 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 C2CD5Q86YS7 1000 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 MIGA1Q8NAN2 632 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 EFCAB6Q5THR3 1501 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 ITGA6P23229 1130 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 GPS2Q13227 327 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 MAGEB6Q8N7X4 407 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 TSG101Q99816 390 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 PA2G4Q9UQ80 394 aaKnown RBP12.48□□□□□ -0.41
PTPRK-205ENST00000368213 PDIA4P13667 645 aaKnown RBP12.48□□□□□ -0.41
PTPRK-205ENST00000368213 PPM1FP49593 454 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-205ENST00000368213 METAP2P50579 478 aaKnown RBP eCLIP12.48□□□□□ -0.41
PTPRK-205ENST00000368213 TSHZ3Q63HK5 1081 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 CAVIN1Q6NZI2 390 aaKnown RBP12.48□□□□□ -0.41
PTPRK-205ENST00000368213 MPNDQ8N594 471 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 SMARCC2Q8TAQ2 1214 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 USP16Q9Y5T5 823 aa12.48□□□□□ -0.41
PTPRK-205ENST00000368213 TTC6Q86TZ1 520 aa12.47□□□□□ -0.41
PTPRK-205ENST00000368213 ARHGAP45Q92619 1136 aa12.47□□□□□ -0.41
PTPRK-205ENST00000368213 CNNM2Q9H8M5 875 aa12.47□□□□□ -0.41
PTPRK-205ENST00000368213 PLEKHH1Q9ULM0 1364 aa12.47□□□□□ -0.41
PTPRK-205ENST00000368213 PLEKHG3A1L390 1219 aa12.47□□□□□ -0.41
PTPRK-205ENST00000368213 PHACTR3Q96KR7 559 aa12.47□□□□□ -0.41
PTPRK-205ENST00000368213 CHD1O14646 1710 aa12.47□□□□□ -0.41
PTPRK-205ENST00000368213 DNMT1P26358 1616 aaKnown RBP12.47□□□□□ -0.41
PTPRK-205ENST00000368213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.47□□□□□ -0.41
PTPRK-205ENST00000368213 TARBP1Q13395 1621 aaKnown RBP12.47□□□□□ -0.41
PTPRK-205ENST00000368213 MYO6Q9UM54 1294 aa12.47□□□□□ -0.41
PTPRK-205ENST00000368213 RAB11FIP4Q86YS3 637 aa12.47□□□□□ -0.41
PTPRK-205ENST00000368213 HMGN5P82970 282 aaKnown RBP12.47□□□□□ -0.41
PTPRK-205ENST00000368213 TEX11Q8IYF3 940 aa12.47□□□□□ -0.41
PTPRK-205ENST00000368213 LGR6Q9HBX8 967 aa12.47□□□□□ -0.41
PTPRK-205ENST00000368213 GNAT2P19087 354 aa12.46□□□□□ -0.41
PTPRK-205ENST00000368213 CALML4Q96GE6 196 aa12.46□□□□□ -0.41
PTPRK-205ENST00000368213 FERMT3Q86UX7 667 aa12.46□□□□□ -0.41
PTPRK-205ENST00000368213 NLGN1Q8N2Q7 840 aa12.46□□□□□ -0.41
PTPRK-205ENST00000368213 SH2B1Q9NRF2 756 aaPredicted RBP12.46□□□□□ -0.41
PTPRK-205ENST00000368213 PAG1Q9NWQ8 432 aa12.46□□□□□ -0.41
PTPRK-205ENST00000368213 CFAP43Q8NDM7 1665 aa12.46□□□□□ -0.41
PTPRK-205ENST00000368213 RAB3GAP1Q15042 981 aa12.46□□□□□ -0.41
PTPRK-205ENST00000368213 FAM182BQ5T319 152 aa12.46□□□□□ -0.41
PTPRK-205ENST00000368213 SLC26A6Q9BXS9 759 aa12.46□□□□□ -0.41
PTPRK-205ENST00000368213 TCP11L1Q9NUJ3 509 aa12.46□□□□□ -0.41
PTPRK-205ENST00000368213 MYO5CQ9NQX4 1742 aa12.46□□□□□ -0.42
PTPRK-205ENST00000368213 MCM5P33992 734 aa12.46□□□□□ -0.42
PTPRK-205ENST00000368213 SSR1P43307 286 aaKnown RBP12.46□□□□□ -0.42
PTPRK-205ENST00000368213 KRT24Q2M2I5 525 aa12.46□□□□□ -0.42
PTPRK-205ENST00000368213 UNC5CLQ8IV45 518 aa12.46□□□□□ -0.42
PTPRK-205ENST00000368213 CCDC191Q8NCU4 936 aa12.46□□□□□ -0.42
PTPRK-205ENST00000368213 RUFY1Q96T51 708 aa12.46□□□□□ -0.42
PTPRK-205ENST00000368213 IVNS1ABPQ9Y6Y0 642 aa12.46□□□□□ -0.42
PTPRK-205ENST00000368213 GNAQP50148 359 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 SEPT12Q8IYM1 358 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 MRPL50Q8N5N7 158 aaKnown RBP12.45□□□□□ -0.42
PTPRK-205ENST00000368213 CARD14Q9BXL6 1004 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 KIF20AO95235 890 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 NEK1Q96PY6 1258 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 MAP3K9P80192 1104 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 HEATR3Q7Z4Q2 680 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 CFAP65Q6ZU64 1925 aaKnown RBP12.45□□□□□ -0.42
PTPRK-205ENST00000368213 TFCP2Q12800 502 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 TXLNBQ8N3L3 684 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 MNS1Q8NEH6 495 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 TSPY26PQ9H489 355 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 KDM5DQ9BY66 1539 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 POLR3AO14802 1390 aaPredicted RBP12.45□□□□□ -0.42
PTPRK-205ENST00000368213 ATP8B2P98198 1209 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 TMTC2Q8N394 836 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 BICD1Q96G01 975 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
PTPRK-205ENST00000368213 SAP30BPQ9UHR5 308 aaKnown RBP12.45□□□□□ -0.42
PTPRK-205ENST00000368213 KIAA0232Q92628 1395 aa12.44□□□□□ -0.42
PTPRK-205ENST00000368213 CCDC192P0DO97 292 aa12.44□□□□□ -0.42
PTPRK-205ENST00000368213 C20orf194Q5TEA3 1177 aa12.44□□□□□ -0.42
PTPRK-205ENST00000368213 METTL22Q9BUU2 404 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-205ENST00000368213 BICC1Q9H694 974 aaKnown RBP12.44□□□□□ -0.42
PTPRK-205ENST00000368213 NLRP1Q9C000 1473 aa12.44□□□□□ -0.42
PTPRK-205ENST00000368213 HMG20BQ9P0W2 317 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms