RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 SSBP05455 408 aaKnown RBP eCLIP15.35■□□□□ 0.05
PTPRK-204ENST00000368210 UQCRFS1P1P0C7P4 283 aa15.35■□□□□ 0.05
PTPRK-204ENST00000368210 IARSP41252 1262 aaKnown RBP15.35■□□□□ 0.05
PTPRK-204ENST00000368210 ATP2B3Q16720 1220 aa15.35■□□□□ 0.05
PTPRK-204ENST00000368210 BABAM1Q9NWV8 329 aa15.35■□□□□ 0.05
PTPRK-204ENST00000368210 SSRP1Q08945 709 aaKnown RBP15.35■□□□□ 0.05
PTPRK-204ENST00000368210 MCMDC2Q4G0Z9 681 aa15.35■□□□□ 0.05
PTPRK-204ENST00000368210 CCDC91Q7Z6B0 441 aa15.35■□□□□ 0.05
PTPRK-204ENST00000368210 DDX21Q9NR30 783 aaKnown RBP eCLIP15.35■□□□□ 0.05
PTPRK-204ENST00000368210 TMEM67Q5HYA8 995 aa15.34■□□□□ 0.05
PTPRK-204ENST00000368210 MICU3Q86XE3 530 aa15.34■□□□□ 0.05
PTPRK-204ENST00000368210 NEO1Q92859 1461 aa15.34■□□□□ 0.05
PTPRK-204ENST00000368210 PPFIA3O75145 1194 aa15.34■□□□□ 0.05
PTPRK-204ENST00000368210 PANK2Q9BZ23 570 aa15.34■□□□□ 0.05
PTPRK-204ENST00000368210 CENPHQ9H3R5 247 aa15.34■□□□□ 0.05
PTPRK-204ENST00000368210 SFPQP23246 707 aaKnown RBP eCLIP15.34■□□□□ 0.054e-7■□□□□ 11
PTPRK-204ENST00000368210 CHMLP26374 656 aa15.34■□□□□ 0.05
PTPRK-204ENST00000368210 IL2RBP14784 551 aa15.33■□□□□ 0.04
PTPRK-204ENST00000368210 ZSCAN23Q3MJ62 389 aa15.33■□□□□ 0.04
PTPRK-204ENST00000368210 TANGO6Q9C0B7 1094 aa15.33■□□□□ 0.04
PTPRK-204ENST00000368210 KAT6BQ8WYB5 2073 aa15.33■□□□□ 0.04
PTPRK-204ENST00000368210 ZNF444Q8N0Y2 327 aaPredicted RBP15.33■□□□□ 0.04
PTPRK-204ENST00000368210 USP26Q9BXU7 913 aa15.33■□□□□ 0.04
PTPRK-204ENST00000368210 LRRC2Q9BYS8 371 aa15.33■□□□□ 0.04
PTPRK-204ENST00000368210 RBM28Q9NW13 759 aaKnown RBP15.33■□□□□ 0.04
PTPRK-204ENST00000368210 MAGI2Q86UL8 1455 aa15.33■□□□□ 0.04
PTPRK-204ENST00000368210 NMIQ13287 307 aaPredicted RBP15.33■□□□□ 0.04
PTPRK-204ENST00000368210 CATIPQ7Z7H3 387 aa15.33■□□□□ 0.04
PTPRK-204ENST00000368210 ZSCAN16Q9H4T2 348 aaPredicted RBP15.33■□□□□ 0.04
PTPRK-204ENST00000368210 MYO5CQ9NQX4 1742 aa15.32■□□□□ 0.04
PTPRK-204ENST00000368210 PLEKHG3A1L390 1219 aa15.32■□□□□ 0.04
PTPRK-204ENST00000368210 SHTN1A0MZ66 631 aa15.32■□□□□ 0.04
PTPRK-204ENST00000368210 POLR3GO15318 223 aaPredicted RBP15.32■□□□□ 0.04
PTPRK-204ENST00000368210 MFSD6Q6ZSS7 791 aa15.32■□□□□ 0.04
PTPRK-204ENST00000368210 KIF18AQ8NI77 898 aa15.32■□□□□ 0.04
PTPRK-204ENST00000368210 METAP2P50579 478 aaKnown RBP eCLIP15.32■□□□□ 0.04
PTPRK-204ENST00000368210 RAB11FIP4Q86YS3 637 aa15.32■□□□□ 0.04
PTPRK-204ENST00000368210 SEC63Q9UGP8 760 aaKnown RBP15.32■□□□□ 0.04
PTPRK-204ENST00000368210 IVLP07476 585 aa15.32■□□□□ 0.04
PTPRK-204ENST00000368210 PTPN14Q15678 1187 aa15.32■□□□□ 0.04
PTPRK-204ENST00000368210 OTUD7AQ8TE49 926 aaPredicted RBP15.32■□□□□ 0.04
PTPRK-204ENST00000368210 OGFRQ9NZT2 677 aa15.32■□□□□ 0.04
PTPRK-204ENST00000368210 ZKSCAN5Q9Y2L8 839 aa15.32■□□□□ 0.04
PTPRK-204ENST00000368210 HOXB7P09629 217 aa15.31■□□□□ 0.04
PTPRK-204ENST00000368210 SF3B2Q13435 895 aaKnown RBP15.31■□□□□ 0.04
PTPRK-204ENST00000368210 CCDC152Q4G0S7 254 aa15.31■□□□□ 0.04
PTPRK-204ENST00000368210 SAMD9LQ8IVG5 1584 aa15.31■□□□□ 0.04
PTPRK-204ENST00000368210 CCDC144CPQ8IYA2 1237 aa15.31■□□□□ 0.04
PTPRK-204ENST00000368210 CCDC102AQ96A19 550 aa15.31■□□□□ 0.04
PTPRK-204ENST00000368210 LUC7LQ9NQ29 371 aaKnown RBP15.31■□□□□ 0.04
PTPRK-204ENST00000368210 PPP1R1BQ9UD71 204 aaPredicted RBP15.31■□□□□ 0.04
PTPRK-204ENST00000368210 KLF18A0A0U1RQI7 1052 aa15.31■□□□□ 0.04
PTPRK-204ENST00000368210 ZNF165P49910 485 aa15.31■□□□□ 0.04
PTPRK-204ENST00000368210 RAB3GAP1Q15042 981 aa15.31■□□□□ 0.04
PTPRK-204ENST00000368210 CNNM3Q8NE01 707 aa15.31■□□□□ 0.04
PTPRK-204ENST00000368210 ODF2Q5BJF6 829 aa15.31■□□□□ 0.04
PTPRK-204ENST00000368210 KLHL10Q6JEL2 608 aa15.31■□□□□ 0.04
PTPRK-204ENST00000368210 RPGRQ92834 1020 aaKnown RBP15.31■□□□□ 0.04
PTPRK-204ENST00000368210 PHF23Q9BUL5 403 aaPredicted RBP15.3■□□□□ 0.04
PTPRK-204ENST00000368210 GBP3Q9H0R5 595 aa15.3■□□□□ 0.04
PTPRK-204ENST00000368210 PLXNC1O60486 1568 aa15.3■□□□□ 0.04
PTPRK-204ENST00000368210 TMEM2Q9UHN6 1383 aa15.3■□□□□ 0.04
PTPRK-204ENST00000368210 CLIP2Q9UDT6 1046 aa15.3■□□□□ 0.04
PTPRK-204ENST00000368210 LRSAM1Q6UWE0 723 aa15.3■□□□□ 0.04
PTPRK-204ENST00000368210 ORAI2Q96SN7 254 aa15.3■□□□□ 0.04
PTPRK-204ENST00000368210 PAG1Q9NWQ8 432 aa15.3■□□□□ 0.04
PTPRK-204ENST00000368210 HCLS1P14317 486 aaPredicted RBP15.29■□□□□ 0.04
PTPRK-204ENST00000368210 BICC1Q9H694 974 aaKnown RBP15.29■□□□□ 0.04
PTPRK-204ENST00000368210 CNPY2Q9Y2B0 182 aa15.29■□□□□ 0.04
PTPRK-204ENST00000368210 GABPB1Q06547 395 aaPredicted RBP15.29■□□□□ 0.04
PTPRK-204ENST00000368210 TMOD2Q9NZR1 351 aa15.29■□□□□ 0.04
PTPRK-204ENST00000368210 MPHOSPH10O00566 681 aaKnown RBP15.29■□□□□ 0.04
PTPRK-204ENST00000368210 NLRP5P59047 1200 aa15.29■□□□□ 0.04
PTPRK-204ENST00000368210 FAM193AP78312 1265 aa15.29■□□□□ 0.04
PTPRK-204ENST00000368210 ZRSR2Q15696 482 aaKnown RBP15.29■□□□□ 0.04
PTPRK-204ENST00000368210 TTC31Q49AM3 519 aaPredicted RBP15.29■□□□□ 0.04
PTPRK-204ENST00000368210 ZNF790Q6PG37 636 aa15.29■□□□□ 0.04
PTPRK-204ENST00000368210 ZGPATQ8N5A5 531 aaKnown RBP15.29■□□□□ 0.04
PTPRK-204ENST00000368210 ADCY5O95622 1261 aa15.29■□□□□ 0.04
PTPRK-204ENST00000368210 NF2P35240 595 aa15.29■□□□□ 0.04
PTPRK-204ENST00000368210 EIF5P55010 431 aaKnown RBP15.29■□□□□ 0.04
PTPRK-204ENST00000368210 GIMAP6Q6P9H5 292 aa15.29■□□□□ 0.04
PTPRK-204ENST00000368210 USP48Q86UV5 1035 aa15.29■□□□□ 0.04
PTPRK-204ENST00000368210 SIRT1Q96EB6 747 aa15.29■□□□□ 0.04
PTPRK-204ENST00000368210 AK2P54819 239 aa15.28■□□□□ 0.04
PTPRK-204ENST00000368210 ZFYVE27Q5T4F4 411 aa15.28■□□□□ 0.04
PTPRK-204ENST00000368210 Q6ZUG5 572 aa15.28■□□□□ 0.04
PTPRK-204ENST00000368210 PAIP2Q9BPZ3 127 aaKnown RBP15.28■□□□□ 0.04
PTPRK-204ENST00000368210 LGR6Q9HBX8 967 aa15.28■□□□□ 0.04
PTPRK-204ENST00000368210 KDM5CP41229 1560 aa15.28■□□□□ 0.04
PTPRK-204ENST00000368210 KDM5AP29375 1690 aaKnown RBP15.28■□□□□ 0.04
PTPRK-204ENST00000368210 EPB41L2O43491 1005 aaKnown RBP15.28■□□□□ 0.04
PTPRK-204ENST00000368210 SLC9C2Q5TAH2 1124 aa15.28■□□□□ 0.04
PTPRK-204ENST00000368210 CRACR2BQ8N4Y2 399 aaPredicted RBP15.28■□□□□ 0.04
PTPRK-204ENST00000368210 PAXBP1Q9Y5B6 917 aa15.28■□□□□ 0.04
PTPRK-204ENST00000368210 CCDC194A0A1B0GVG4 234 aa15.28■□□□□ 0.04
PTPRK-204ENST00000368210 BIN1O00499 593 aa15.28■□□□□ 0.04
PTPRK-204ENST00000368210 CAVIN2O95810 425 aa15.28■□□□□ 0.04
PTPRK-204ENST00000368210 LDHCP07864 332 aa15.28■□□□□ 0.04
PTPRK-204ENST00000368210 STX1AQ16623 288 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms