RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 ARFGEF2Q9Y6D5 1785 aa8.53□□□□□ -1.04
RNU1-55P-201ENST00000365510 MAP3K15Q6ZN16 1313 aa8.53□□□□□ -1.04
RNU1-55P-201ENST00000365510 COL11A2P13942 1736 aaPredicted RBP8.52□□□□□ -1.05
RNU1-55P-201ENST00000365510 IBTKQ9P2D0 1353 aaPredicted RBP8.52□□□□□ -1.05
RNU1-55P-201ENST00000365510 ERVV-1B6SEH8 477 aa8.52□□□□□ -1.05
RNU1-55P-201ENST00000365510 LBX1P52954 281 aa8.52□□□□□ -1.05
RNU1-55P-201ENST00000365510 HSP90AB3PQ58FF7 597 aa8.52□□□□□ -1.05
RNU1-55P-201ENST00000365510 NUTM1Q86Y26 1132 aa8.52□□□□□ -1.05
RNU1-55P-201ENST00000365510 SYNE4Q8N205 404 aa8.52□□□□□ -1.05
RNU1-55P-201ENST00000365510 CNBD1Q8NA66 436 aa8.52□□□□□ -1.05
RNU1-55P-201ENST00000365510 EXOC6Q8TAG9 804 aa8.52□□□□□ -1.05
RNU1-55P-201ENST00000365510 METTL22Q9BUU2 404 aaPredicted RBP8.52□□□□□ -1.05
RNU1-55P-201ENST00000365510 ZBTB3Q9H5J0 574 aa8.52□□□□□ -1.05
RNU1-55P-201ENST00000365510 FER1L6Q2WGJ9 1857 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 SCN7AQ01118 1682 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 TNRC6CQ9HCJ0 1690 aaKnown RBP8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 RGL2O15211 777 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 ALDH1L1O75891 902 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 GRM1Q13255 1194 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 BEND3Q5T5X7 828 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 STYK1Q6J9G0 422 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 DLK2Q6UY11 383 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 C3orf67Q6ZVT6 689 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 NBPF5PQ86XG9 351 aaPredicted RBP8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 LINS1Q8NG48 757 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 CNKSR1Q969H4 720 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 MASTLQ96GX5 879 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 MYD88Q99836 296 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 TSKSQ9UJT2 592 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 TIAM2Q8IVF5 1701 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 PASKQ96RG2 1323 aa8.51□□□□□ -1.05
RNU1-55P-201ENST00000365510 BCORQ6W2J9 1755 aa8.5□□□□□ -1.05
RNU1-55P-201ENST00000365510 GNAI3P08754 354 aa8.5□□□□□ -1.05
RNU1-55P-201ENST00000365510 GIGYF2Q6Y7W6 1299 aaKnown RBP8.5□□□□□ -1.05
RNU1-55P-201ENST00000365510 CREBZFQ9NS37 354 aa8.5□□□□□ -1.05
RNU1-55P-201ENST00000365510 NIP7Q9Y221 180 aaKnown RBP eCLIP8.5□□□□□ -1.05
RNU1-55P-201ENST00000365510 GJA3Q9Y6H8 435 aa8.5□□□□□ -1.05
RNU1-55P-201ENST00000365510 DLEC1Q9Y238 1755 aa8.5□□□□□ -1.05
RNU1-55P-201ENST00000365510 DICER1Q9UPY3 1922 aaKnown RBP8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 NEURL1BA8MQ27 555 aa8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 TRAF5O00463 557 aa8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 UBTFL1P0CB47 393 aaPredicted RBP8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 GPTP24298 496 aa8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 EPS15P42566 896 aa8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 ST5P78524 1137 aa8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 TCIRG1Q13488 830 aa8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 CWF19L2Q2TBE0 894 aaKnown RBP8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 CNTROBQ8N137 903 aa8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 CCDC191Q8NCU4 936 aa8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 MEIS3Q99687 375 aa8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 CWC25Q9NXE8 425 aaPredicted RBP8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 PPP4R2Q9NY27 417 aa8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 C9orf78Q9NZ63 289 aaPredicted RBP8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 HDAC5Q9UQL6 1122 aa8.49□□□□□ -1.05
RNU1-55P-201ENST00000365510 ATP5J2-PTCD1G3V325 749 aa8.48□□□□□ -1.05
RNU1-55P-201ENST00000365510 GRM8O00222 908 aa8.48□□□□□ -1.05
RNU1-55P-201ENST00000365510 ZBTB7BO15156 539 aaPredicted RBP8.48□□□□□ -1.05
RNU1-55P-201ENST00000365510 GNAI2P04899 355 aa8.48□□□□□ -1.05
RNU1-55P-201ENST00000365510 IGKV5-2P06315 115 aa8.48□□□□□ -1.05
RNU1-55P-201ENST00000365510 EPHX2P34913 555 aa8.48□□□□□ -1.05
RNU1-55P-201ENST00000365510 FKBP4Q02790 459 aaKnown RBP eCLIP8.48□□□□□ -1.05
RNU1-55P-201ENST00000365510 GCKRQ14397 625 aa8.48□□□□□ -1.05
RNU1-55P-201ENST00000365510 CLEC4GQ6UXB4 293 aa8.48□□□□□ -1.05
RNU1-55P-201ENST00000365510 ISCA1Q9BUE6 129 aa8.48□□□□□ -1.05
RNU1-55P-201ENST00000365510 ZBTB40Q9NUA8 1239 aa8.48□□□□□ -1.05
RNU1-55P-201ENST00000365510 COL4A5P29400 1685 aa8.48□□□□□ -1.05
RNU1-55P-201ENST00000365510 ZC3H4Q9UPT8 1303 aaKnown RBP8.48□□□□□ -1.05
RNU1-55P-201ENST00000365510 ANKRD36CQ5JPF3 1778 aa8.48□□□□□ -1.05
RNU1-55P-201ENST00000365510 CNTNAP1P78357 1384 aa8.48□□□□□ -1.05
RNU1-55P-201ENST00000365510 SHTN1A0MZ66 631 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 TMEM88BA6NKF7 163 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 AOC2O75106 756 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 HSPA8P11142 646 aaKnown RBP8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 NPR1P16066 1061 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 IARSP41252 1262 aaKnown RBP8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 TRIM28Q13263 835 aaKnown RBP8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 DEFB115Q30KQ5 88 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 PARP10Q53GL7 1025 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 CCDC93Q567U6 631 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 SUSD4Q5VX71 490 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 CYP4F22Q6NT55 531 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 LDHDQ86WU2 507 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 CCDC136Q96JN2 1154 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 USP44Q9H0E7 712 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 C1orf115Q9H7X2 142 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 WBP1LQ9NX94 342 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 HACL1Q9UJ83 578 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 UTYO14607 1347 aa8.47□□□□□ -1.05
RNU1-55P-201ENST00000365510 KLRG2A4D1S0 409 aaPredicted RBP8.46□□□□□ -1.06
RNU1-55P-201ENST00000365510 GTF2E1P29083 439 aaPredicted RBP8.46□□□□□ -1.06
RNU1-55P-201ENST00000365510 CST9Q5W186 159 aa8.46□□□□□ -1.06
RNU1-55P-201ENST00000365510 TPTE2Q6XPS3 522 aa8.46□□□□□ -1.06
RNU1-55P-201ENST00000365510 PAXIP1Q6ZW49 1069 aaPredicted RBP8.46□□□□□ -1.06
RNU1-55P-201ENST00000365510 NLRP10Q86W26 655 aa8.46□□□□□ -1.06
RNU1-55P-201ENST00000365510 ZBTB38Q8NAP3 1195 aaPredicted RBP8.46□□□□□ -1.06
RNU1-55P-201ENST00000365510 L3MBTL3Q96JM7 780 aaPredicted RBP8.46□□□□□ -1.06
RNU1-55P-201ENST00000365510 ZIC5Q96T25 663 aa8.46□□□□□ -1.06
RNU1-55P-201ENST00000365510 ABT1Q9ULW3 272 aaKnown RBP8.46□□□□□ -1.06
RNU1-55P-201ENST00000365510 LTBP3Q9NS15 1303 aa8.46□□□□□ -1.06
RNU1-55P-201ENST00000365510 ABCC12Q96J65 1359 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms