RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 SLC35F4A4IF30 521 aa9.04□□□□□ -0.96
RNU4-39P-201ENST00000362455 SORBS3O60504 671 aa9.04□□□□□ -0.96
RNU4-39P-201ENST00000362455 EGFRP00533 1210 aa9.04□□□□□ -0.96
RNU4-39P-201ENST00000362455 GNA15P30679 374 aa9.04□□□□□ -0.96
RNU4-39P-201ENST00000362455 FIGNL1Q6PIW4 674 aa9.04□□□□□ -0.96
RNU4-39P-201ENST00000362455 ATXN7O15265 892 aaPredicted RBP9.03□□□□□ -0.96
RNU4-39P-201ENST00000362455 PHACTR2O75167 634 aa9.03□□□□□ -0.96
RNU4-39P-201ENST00000362455 FAM157BP0CG42 384 aa9.03□□□□□ -0.96
RNU4-39P-201ENST00000362455 NUCKS1Q9H1E3 243 aaKnown RBP9.03□□□□□ -0.96
RNU4-39P-201ENST00000362455 ZFYVE28Q9HCC9 887 aa9.03□□□□□ -0.96
RNU4-39P-201ENST00000362455 C11orf16Q9NQ32 467 aa9.03□□□□□ -0.96
RNU4-39P-201ENST00000362455 VTI1BQ9UEU0 232 aa9.03□□□□□ -0.96
RNU4-39P-201ENST00000362455 KCNH4Q9UQ05 1017 aa9.03□□□□□ -0.96
RNU4-39P-201ENST00000362455 DCDC2BA2VCK2 349 aa9.02□□□□□ -0.97
RNU4-39P-201ENST00000362455 C11orf95C9JLR9 678 aaPredicted RBP9.02□□□□□ -0.97
RNU4-39P-201ENST00000362455 ITGAEP38570 1179 aa9.02□□□□□ -0.97
RNU4-39P-201ENST00000362455 KCNQ4P56696 695 aa9.02□□□□□ -0.97
RNU4-39P-201ENST00000362455 SFSWAPQ12872 951 aaKnown RBP9.02□□□□□ -0.97
RNU4-39P-201ENST00000362455 UBAP2LQ14157 1087 aaKnown RBP9.02□□□□□ -0.97
RNU4-39P-201ENST00000362455 LDLRAD1Q5T700 205 aa9.02□□□□□ -0.97
RNU4-39P-201ENST00000362455 NLRP13Q86W25 1043 aa9.02□□□□□ -0.97
RNU4-39P-201ENST00000362455 PCDHGC4Q9Y5F7 938 aa9.02□□□□□ -0.97
RNU4-39P-201ENST00000362455 KHNYNO15037 678 aaKnown RBP9.01□□□□□ -0.97
RNU4-39P-201ENST00000362455 EFSO43281 561 aa9.01□□□□□ -0.97
RNU4-39P-201ENST00000362455 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.01□□□□□ -0.97
RNU4-39P-201ENST00000362455 CCDC155Q8N6L0 562 aa9.01□□□□□ -0.97
RNU4-39P-201ENST00000362455 CCDC74AQ96AQ1 378 aa9.01□□□□□ -0.97
RNU4-39P-201ENST00000362455 CHRDQ9H2X0 955 aa9.01□□□□□ -0.97
RNU4-39P-201ENST00000362455 CUEDC1Q9NWM3 386 aaPredicted RBP9.01□□□□□ -0.97
RNU4-39P-201ENST00000362455 ABI2Q9NYB9 513 aaPredicted RBP9.01□□□□□ -0.97
RNU4-39P-201ENST00000362455 CNTN3Q9P232 1028 aa9.01□□□□□ -0.97
RNU4-39P-201ENST00000362455 HMGXB3Q12766 1538 aa9□□□□□ -0.97
RNU4-39P-201ENST00000362455 H7C1W4 665 aa9□□□□□ -0.97
RNU4-39P-201ENST00000362455 IRS1P35568 1242 aa9□□□□□ -0.97
RNU4-39P-201ENST00000362455 DBN1Q16643 649 aa9□□□□□ -0.97
RNU4-39P-201ENST00000362455 PI16Q6UXB8 463 aa9□□□□□ -0.97
RNU4-39P-201ENST00000362455 C1orf127Q8N9H9 656 aa9□□□□□ -0.97
RNU4-39P-201ENST00000362455 EPS8L3Q8TE67 593 aaKnown RBP9□□□□□ -0.97
RNU4-39P-201ENST00000362455 FRMD6Q96NE9 622 aa9□□□□□ -0.97
RNU4-39P-201ENST00000362455 SPG7Q9UQ90 795 aa9□□□□□ -0.97
RNU4-39P-201ENST00000362455 AK5Q9Y6K8 562 aa9□□□□□ -0.97
RNU4-39P-201ENST00000362455 SMARCA2P51531 1590 aa8.99□□□□□ -0.97
RNU4-39P-201ENST00000362455 SMARCA4P51532 1647 aa8.99□□□□□ -0.97
RNU4-39P-201ENST00000362455 SCAMP3O14828 347 aaKnown RBP8.99□□□□□ -0.97
RNU4-39P-201ENST00000362455 EREGO14944 169 aa8.99□□□□□ -0.97
RNU4-39P-201ENST00000362455 SASH3O75995 380 aa8.99□□□□□ -0.97
RNU4-39P-201ENST00000362455 POLR3DP05423 398 aaPredicted RBP8.99□□□□□ -0.97
RNU4-39P-201ENST00000362455 SNRPBP14678 240 aaKnown RBP8.99□□□□□ -0.97
RNU4-39P-201ENST00000362455 TNP2Q05952 138 aa8.99□□□□□ -0.97
RNU4-39P-201ENST00000362455 KRT25Q7Z3Z0 450 aa8.99□□□□□ -0.97
RNU4-39P-201ENST00000362455 TRIM22Q8IYM9 498 aa8.99□□□□□ -0.97
RNU4-39P-201ENST00000362455 STRN4Q9NRL3 753 aa8.99□□□□□ -0.97
RNU4-39P-201ENST00000362455 MAPTP10636 758 aaKnown RBP8.98□□□□□ -0.97
RNU4-39P-201ENST00000362455 CCINQ13939 588 aa8.98□□□□□ -0.97
RNU4-39P-201ENST00000362455 TTC39BQ5VTQ0 682 aaPredicted RBP8.98□□□□□ -0.97
RNU4-39P-201ENST00000362455 TMEM87AQ8NBN3 555 aa8.98□□□□□ -0.97
RNU4-39P-201ENST00000362455 GSX2Q9BZM3 304 aa8.98□□□□□ -0.97
RNU4-39P-201ENST00000362455 NPHS2Q9NP85 383 aa8.98□□□□□ -0.97
RNU4-39P-201ENST00000362455 NLRP2Q9NX02 1062 aa8.98□□□□□ -0.97
RNU4-39P-201ENST00000362455 HCN2Q9UL51 889 aa8.98□□□□□ -0.97
RNU4-39P-201ENST00000362455 BNIP3LO60238 219 aa8.97□□□□□ -0.97
RNU4-39P-201ENST00000362455 TARSP26639 723 aaKnown RBP8.97□□□□□ -0.97
RNU4-39P-201ENST00000362455 LAMC2Q13753 1193 aa8.97□□□□□ -0.97
RNU4-39P-201ENST00000362455 GRIN2CQ14957 1233 aa8.97□□□□□ -0.97
RNU4-39P-201ENST00000362455 NDFIP2Q9NV92 336 aa8.97□□□□□ -0.97
RNU4-39P-201ENST00000362455 BAZ1BQ9UIG0 1483 aaKnown RBP8.96□□□□□ -0.97
RNU4-39P-201ENST00000362455 CYP2E1P05181 493 aaPredicted RBP8.96□□□□□ -0.98
RNU4-39P-201ENST00000362455 CES1P23141 567 aa8.96□□□□□ -0.98
RNU4-39P-201ENST00000362455 EIF4BP23588 611 aaKnown RBP8.96□□□□□ -0.98
RNU4-39P-201ENST00000362455 HDLBPQ00341 1268 aaKnown RBP8.96□□□□□ -0.98
RNU4-39P-201ENST00000362455 GALNT12Q8IXK2 581 aa8.96□□□□□ -0.98
RNU4-39P-201ENST00000362455 ZNF837Q96EG3 531 aaPredicted RBP8.96□□□□□ -0.98
RNU4-39P-201ENST00000362455 ABHD17AQ96GS6 310 aa8.96□□□□□ -0.98
RNU4-39P-201ENST00000362455 MARK1Q9P0L2 795 aa8.96□□□□□ -0.98
RNU4-39P-201ENST00000362455 POTECB2RU33 542 aa8.95□□□□□ -0.98
RNU4-39P-201ENST00000362455 CTSHP09668 335 aa8.95□□□□□ -0.98
RNU4-39P-201ENST00000362455 ITGA6P23229 1130 aa8.95□□□□□ -0.98
RNU4-39P-201ENST00000362455 PMEPA1Q969W9 287 aa8.95□□□□□ -0.98
RNU4-39P-201ENST00000362455 CRELD1Q96HD1 420 aa8.95□□□□□ -0.98
RNU4-39P-201ENST00000362455 OSBPL7Q9BZF2 842 aa8.95□□□□□ -0.98
RNU4-39P-201ENST00000362455 C12orf49Q9H741 205 aa8.95□□□□□ -0.98
RNU4-39P-201ENST00000362455 ZFATQ9P243 1243 aa8.95□□□□□ -0.98
RNU4-39P-201ENST00000362455 KANSL3Q9P2N6 904 aa8.95□□□□□ -0.98
RNU4-39P-201ENST00000362455 GIPC1O14908 333 aa8.94□□□□□ -0.98
RNU4-39P-201ENST00000362455 MMP20O60882 483 aa8.94□□□□□ -0.98
RNU4-39P-201ENST00000362455 RARAP10276 462 aa8.94□□□□□ -0.98
RNU4-39P-201ENST00000362455 NFKB1P19838 968 aa8.94□□□□□ -0.98
RNU4-39P-201ENST00000362455 CD33P20138 364 aa8.94□□□□□ -0.98
RNU4-39P-201ENST00000362455 VEGFBP49765 207 aa8.94□□□□□ -0.98
RNU4-39P-201ENST00000362455 SPEM2Q0P670 501 aa8.94□□□□□ -0.98
RNU4-39P-201ENST00000362455 C9orf131Q5VYM1 1079 aa8.94□□□□□ -0.98
RNU4-39P-201ENST00000362455 OR13H1Q8NG92 308 aa8.94□□□□□ -0.98
RNU4-39P-201ENST00000362455 GTPBP3Q969Y2 492 aaKnown RBP8.94□□□□□ -0.98
RNU4-39P-201ENST00000362455 GMCL1Q96IK5 515 aa8.94□□□□□ -0.98
RNU4-39P-201ENST00000362455 PNMA5Q96PV4 448 aa8.94□□□□□ -0.98
RNU4-39P-201ENST00000362455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.94□□□□□ -0.98
RNU4-39P-201ENST00000362455 MROH2BQ7Z745 1585 aa8.94□□□□□ -0.98
RNU4-39P-201ENST00000362455 THOC2Q8NI27 1593 aaKnown RBP8.94□□□□□ -0.98
RNU4-39P-201ENST00000362455 GADD45BO75293 160 aaPredicted RBP8.93□□□□□ -0.98
RNU4-39P-201ENST00000362455 FANCCQ00597 558 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms