RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 RNF17Q9BXT8 1623 aaKnown RBP16.22■□□□□ 0.19
CTR9-201ENST00000361367 NBPF7P0C2Y1 421 aaPredicted RBP16.22■□□□□ 0.19
CTR9-201ENST00000361367 CCDC192P0DO97 292 aa16.22■□□□□ 0.19
CTR9-201ENST00000361367 GCKRQ14397 625 aa16.22■□□□□ 0.19
CTR9-201ENST00000361367 MICU3Q86XE3 530 aa16.22■□□□□ 0.19
CTR9-201ENST00000361367 RBM8AQ9Y5S9 174 aaKnown RBP16.22■□□□□ 0.19
CTR9-201ENST00000361367 SLC4A4Q9Y6R1 1079 aa16.22■□□□□ 0.19
CTR9-201ENST00000361367 SYNMO15061 1565 aa16.22■□□□□ 0.19
CTR9-201ENST00000361367 HOMER1Q86YM7 354 aa16.22■□□□□ 0.19
CTR9-201ENST00000361367 CCAR2Q8N163 923 aaKnown RBP16.22■□□□□ 0.19
CTR9-201ENST00000361367 PDE8AO60658 829 aa16.21■□□□□ 0.19
CTR9-201ENST00000361367 SSBP05455 408 aaKnown RBP eCLIP16.21■□□□□ 0.19
CTR9-201ENST00000361367 BRINP3Q76B58 766 aa16.21■□□□□ 0.19
CTR9-201ENST00000361367 OGFOD1Q8N543 542 aa16.21■□□□□ 0.19
CTR9-201ENST00000361367 ERBB3P21860 1342 aa16.21■□□□□ 0.19
CTR9-201ENST00000361367 MYO1BO43795 1136 aa16.21■□□□□ 0.19
CTR9-201ENST00000361367 PLEKHM2Q8IWE5 1019 aa16.21■□□□□ 0.19
CTR9-201ENST00000361367 RTL1A6NKG5 1358 aa16.21■□□□□ 0.19
CTR9-201ENST00000361367 UNC13BO14795 1591 aa16.21■□□□□ 0.19
CTR9-201ENST00000361367 TTLL12Q14166 644 aaPredicted RBP16.21■□□□□ 0.19
CTR9-201ENST00000361367 ZNF592Q92610 1267 aa16.21■□□□□ 0.19
CTR9-201ENST00000361367 PLEKHF1Q96S99 279 aa16.21■□□□□ 0.19
CTR9-201ENST00000361367 OFD1O75665 1012 aa16.21■□□□□ 0.18
CTR9-201ENST00000361367 MCM5P33992 734 aa16.21■□□□□ 0.18
CTR9-201ENST00000361367 TIMM10P62072 90 aa16.21■□□□□ 0.18
CTR9-201ENST00000361367 KLHDC4Q8TBB5 520 aa16.21■□□□□ 0.18
CTR9-201ENST00000361367 CABP5Q9NP86 173 aa16.21■□□□□ 0.18
CTR9-201ENST00000361367 WDR17Q8IZU2 1322 aa16.21■□□□□ 0.18
CTR9-201ENST00000361367 FEZ1Q99689 392 aa16.2■□□□□ 0.18
CTR9-201ENST00000361367 STX8Q9UNK0 236 aa16.2■□□□□ 0.18
CTR9-201ENST00000361367 CEP131Q9UPN4 1083 aa16.2■□□□□ 0.18
CTR9-201ENST00000361367 NMIQ13287 307 aaPredicted RBP16.2■□□□□ 0.18
CTR9-201ENST00000361367 TMEM132AQ24JP5 1023 aa16.2■□□□□ 0.18
CTR9-201ENST00000361367 SSRP1Q08945 709 aaKnown RBP16.2■□□□□ 0.18
CTR9-201ENST00000361367 PDILTQ8N807 584 aa16.2■□□□□ 0.18
CTR9-201ENST00000361367 BRF1Q92994 677 aa16.2■□□□□ 0.18
CTR9-201ENST00000361367 IARSP41252 1262 aaKnown RBP16.19■□□□□ 0.18
CTR9-201ENST00000361367 BMP2KQ9NSY1 1161 aaPredicted RBP16.19■□□□□ 0.18
CTR9-201ENST00000361367 RIMBP3CA6NJZ7 1639 aa16.19■□□□□ 0.18
CTR9-201ENST00000361367 RIMBP3BA6NNM3 1639 aa16.19■□□□□ 0.18
CTR9-201ENST00000361367 RIMBP3Q9UFD9 1639 aa16.19■□□□□ 0.18
CTR9-201ENST00000361367 SMC2O95347 1197 aa16.19■□□□□ 0.18
CTR9-201ENST00000361367 APBA3O96018 575 aa16.19■□□□□ 0.18
CTR9-201ENST00000361367 KIF5BP33176 963 aa16.19■□□□□ 0.18
CTR9-201ENST00000361367 FILIP1LQ4L180 1135 aa16.19■□□□□ 0.18
CTR9-201ENST00000361367 CCDC144CPQ8IYA2 1237 aa16.19■□□□□ 0.18
CTR9-201ENST00000361367 SUCLG2Q96I99 432 aa16.19■□□□□ 0.18
CTR9-201ENST00000361367 KAT14Q9H8E8 782 aa16.19■□□□□ 0.18
CTR9-201ENST00000361367 MAGEC2Q9UBF1 373 aaPredicted RBP16.19■□□□□ 0.18
CTR9-201ENST00000361367 A0A1B0GUL7 405 aa16.19■□□□□ 0.18
CTR9-201ENST00000361367 STIM1Q13586 685 aa16.19■□□□□ 0.18
CTR9-201ENST00000361367 TCEANC2Q96MN5 208 aa16.19■□□□□ 0.18
CTR9-201ENST00000361367 SCAND2PQ9GZW5 306 aaPredicted RBP16.19■□□□□ 0.18
CTR9-201ENST00000361367 HDAC9Q9UKV0 1011 aa16.19■□□□□ 0.18
CTR9-201ENST00000361367 RAB11FIP4Q86YS3 637 aa16.18■□□□□ 0.18
CTR9-201ENST00000361367 NUP62CLQ9H1M0 184 aa16.18■□□□□ 0.18
CTR9-201ENST00000361367 TRPC5Q9UL62 973 aaPredicted RBP16.18■□□□□ 0.18
CTR9-201ENST00000361367 ANKARQ7Z5J8 1434 aa16.18■□□□□ 0.18
CTR9-201ENST00000361367 RNF113AO15541 343 aaKnown RBP16.18■□□□□ 0.18
CTR9-201ENST00000361367 EYA3Q99504 573 aa16.18■□□□□ 0.18
CTR9-201ENST00000361367 KIF24Q5T7B8 1368 aa16.18■□□□□ 0.18
CTR9-201ENST00000361367 ESR2Q92731 530 aa16.18■□□□□ 0.18
CTR9-201ENST00000361367 ORC3Q9UBD5 711 aaPredicted RBP16.18■□□□□ 0.18
CTR9-201ENST00000361367 RIMBP2O15034 1052 aa16.18■□□□□ 0.18
CTR9-201ENST00000361367 METAP2P50579 478 aaKnown RBP eCLIP16.18■□□□□ 0.18
CTR9-201ENST00000361367 RBM17Q96I25 401 aaKnown RBP16.18■□□□□ 0.18
CTR9-201ENST00000361367 ZNF594Q96JF6 807 aaPredicted RBP16.18■□□□□ 0.18
CTR9-201ENST00000361367 KRT23Q9C075 422 aa16.18■□□□□ 0.18
CTR9-201ENST00000361367 TCIRG1Q13488 830 aa16.17■□□□□ 0.18
CTR9-201ENST00000361367 BRPF1P55201 1214 aaPredicted RBP16.17■□□□□ 0.18
CTR9-201ENST00000361367 NLRP5P59047 1200 aa16.17■□□□□ 0.18
CTR9-201ENST00000361367 ANAPC15P60006 121 aa16.17■□□□□ 0.18
CTR9-201ENST00000361367 QTRT2Q9H974 415 aaKnown RBP16.17■□□□□ 0.18
CTR9-201ENST00000361367 DACH1Q9UI36 760 aa16.17■□□□□ 0.18
CTR9-201ENST00000361367 MAGEB6P1A0A0J9YX57 407 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 PNMA6EA0A0J9YXQ4 647 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 WTAPQ15007 396 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 LRRC2Q9BYS8 371 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 KLF18A0A0U1RQI7 1052 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 CCDC194A0A1B0GVG4 234 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 PPFIA3O75145 1194 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 JDP2Q8WYK2 163 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 CNNM2Q9H8M5 875 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 GJB2P29033 226 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 TNNI3KQ59H18 835 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 CCDC24Q8N4L8 307 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 MAGEB6Q8N7X4 407 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 MIGA1Q8NAN2 632 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 DBNDD2Q9BQY9 259 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 JAG2Q9Y219 1238 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 FPGT-TNNI3KV9GXZ4 949 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 SPATA31A3Q5VYP0 1347 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 VAT1LQ9HCJ6 419 aa16.16■□□□□ 0.18
CTR9-201ENST00000361367 NEURL1BA8MQ27 555 aa16.15■□□□□ 0.18
CTR9-201ENST00000361367 PICALMQ13492 652 aa16.15■□□□□ 0.18
CTR9-201ENST00000361367 CEP57L1Q8IYX8 460 aa16.15■□□□□ 0.18
CTR9-201ENST00000361367 LDHBP07195 334 aaKnown RBP16.15■□□□□ 0.18
CTR9-201ENST00000361367 PUM3Q15397 648 aaKnown RBP16.15■□□□□ 0.18
CTR9-201ENST00000361367 ERBB4Q15303 1308 aa16.15■□□□□ 0.18
CTR9-201ENST00000361367 TSPY3P0CV98 308 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms