RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 MPNDQ8N594 471 aa19.66■□□□□ 0.74
GDPD3-201ENST00000360688 CHPF2Q9P2E5 772 aa19.66■□□□□ 0.74
GDPD3-201ENST00000360688 LAS1LQ9Y4W2 734 aaKnown RBP19.66■□□□□ 0.74
GDPD3-201ENST00000360688 LBX1P52954 281 aa19.65■□□□□ 0.74
GDPD3-201ENST00000360688 KIAA2012Q0VF49 1180 aa19.65■□□□□ 0.74
GDPD3-201ENST00000360688 GRAPQ13588 217 aa19.65■□□□□ 0.74
GDPD3-201ENST00000360688 CST9Q5W186 159 aa19.65■□□□□ 0.74
GDPD3-201ENST00000360688 GRAPLQ8TC17 118 aaPredicted RBP19.65■□□□□ 0.74
GDPD3-201ENST00000360688 RUNDC1Q96C34 613 aa19.65■□□□□ 0.74
GDPD3-201ENST00000360688 THSD7BQ9C0I4 1608 aa19.65■□□□□ 0.74
GDPD3-201ENST00000360688 LRRC37AA6NMS7 1700 aa19.64■□□□□ 0.74
GDPD3-201ENST00000360688 GMPSP49915 693 aaPredicted RBP19.64■□□□□ 0.73
GDPD3-201ENST00000360688 MAP2K1Q02750 393 aaPredicted RBP19.64■□□□□ 0.73
GDPD3-201ENST00000360688 DDX10Q13206 875 aaKnown RBP19.64■□□□□ 0.73
GDPD3-201ENST00000360688 ZNF428Q96B54 188 aa19.64■□□□□ 0.73
GDPD3-201ENST00000360688 HDGFL1Q5TGJ6 251 aa19.63■□□□□ 0.73
GDPD3-201ENST00000360688 CIAPIN1Q6FI81 312 aa19.63■□□□□ 0.73
GDPD3-201ENST00000360688 DUOX1Q9NRD9 1551 aa19.63■□□□□ 0.73
GDPD3-201ENST00000360688 HOXB7P09629 217 aa19.62■□□□□ 0.73
GDPD3-201ENST00000360688 HSPA8P11142 646 aaKnown RBP19.62■□□□□ 0.73
GDPD3-201ENST00000360688 WDR43Q15061 677 aaKnown RBP eCLIP19.62■□□□□ 0.73
GDPD3-201ENST00000360688 ANKRD13DQ6ZTN6 518 aa19.62■□□□□ 0.73
GDPD3-201ENST00000360688 PLBD2Q8NHP8 589 aa19.62■□□□□ 0.73
GDPD3-201ENST00000360688 CAPNS2Q96L46 248 aa19.62■□□□□ 0.73
GDPD3-201ENST00000360688 CDHR2Q9BYE9 1310 aa19.61■□□□□ 0.73
GDPD3-201ENST00000360688 RAD17O75943 681 aa19.61■□□□□ 0.73
GDPD3-201ENST00000360688 CYP4F22Q6NT55 531 aa19.61■□□□□ 0.73
GDPD3-201ENST00000360688 PAXIP1Q6ZW49 1069 aaPredicted RBP19.61■□□□□ 0.73
GDPD3-201ENST00000360688 TMC4Q7Z404 712 aa19.61■□□□□ 0.73
GDPD3-201ENST00000360688 ISCA1Q9BUE6 129 aa19.61■□□□□ 0.73
GDPD3-201ENST00000360688 DBF4Q9UBU7 674 aaPredicted RBP19.61■□□□□ 0.73
GDPD3-201ENST00000360688 ADAMTS8Q9UP79 889 aa19.61■□□□□ 0.73
GDPD3-201ENST00000360688 TLL2Q9Y6L7 1015 aa19.61■□□□□ 0.73
GDPD3-201ENST00000360688 YDJCA8MPS7 323 aa19.6■□□□□ 0.73
GDPD3-201ENST00000360688 ECE1P42892 770 aa19.6■□□□□ 0.73
GDPD3-201ENST00000360688 TNIP1Q15025 636 aa19.6■□□□□ 0.73
GDPD3-201ENST00000360688 FAM89AQ96GI7 184 aa19.6■□□□□ 0.73
GDPD3-201ENST00000360688 BCL2L13Q9BXK5 485 aa19.6■□□□□ 0.73
GDPD3-201ENST00000360688 PGAP2Q9UHJ9 254 aa19.6■□□□□ 0.73
GDPD3-201ENST00000360688 ATP5J2-PTCD1G3V325 749 aa19.59■□□□□ 0.73
GDPD3-201ENST00000360688 CFAP44Q96MT7 982 aa19.59■□□□□ 0.73
GDPD3-201ENST00000360688 HIRAP54198 1017 aaPredicted RBP19.58■□□□□ 0.73
GDPD3-201ENST00000360688 GRM1Q13255 1194 aa19.58■□□□□ 0.73
GDPD3-201ENST00000360688 SF3B3Q15393 1217 aaKnown RBP19.58■□□□□ 0.73
GDPD3-201ENST00000360688 CELF1Q92879 486 aaKnown RBP19.58■□□□□ 0.73
GDPD3-201ENST00000360688 GPR101Q96P66 508 aaPredicted RBP19.58■□□□□ 0.73
GDPD3-201ENST00000360688 GLIS2Q9BZE0 524 aaPredicted RBP19.58■□□□□ 0.73
GDPD3-201ENST00000360688 HYPKQ9NX55 129 aa19.58■□□□□ 0.73
GDPD3-201ENST00000360688 COL4A1P02462 1669 aa19.58■□□□□ 0.72
GDPD3-201ENST00000360688 CELF2O95319 508 aaKnown RBP19.57■□□□□ 0.72
GDPD3-201ENST00000360688 DUSP27Q5VZP5 1158 aa19.57■□□□□ 0.72
GDPD3-201ENST00000360688 TRPM4Q8TD43 1214 aa19.57■□□□□ 0.72
GDPD3-201ENST00000360688 ZC3H15Q8WU90 426 aaKnown RBP19.57■□□□□ 0.72
GDPD3-201ENST00000360688 CNOT7Q9UIV1 285 aaKnown RBP19.57■□□□□ 0.72
GDPD3-201ENST00000360688 SHTN1A0MZ66 631 aa19.56■□□□□ 0.72
GDPD3-201ENST00000360688 RTL5Q5HYW3 569 aaPredicted RBP19.56■□□□□ 0.72
GDPD3-201ENST00000360688 SAPCD2Q86UD0 394 aa19.56■□□□□ 0.72
GDPD3-201ENST00000360688 MBIPQ9NS73 344 aa19.56■□□□□ 0.72
GDPD3-201ENST00000360688 NSFL1CQ9UNZ2 370 aaKnown RBP19.56■□□□□ 0.72
GDPD3-201ENST00000360688 POLR2AP24928 1970 aaKnown RBP19.56■□□□□ 0.72
GDPD3-201ENST00000360688 TRIM28Q13263 835 aaKnown RBP19.55■□□□□ 0.72
GDPD3-201ENST00000360688 WASHC4Q2M389 1173 aa19.55■□□□□ 0.72
GDPD3-201ENST00000360688 BEGAINQ9BUH8 593 aa19.55■□□□□ 0.72
GDPD3-201ENST00000360688 AOC2O75106 756 aa19.54■□□□□ 0.72
GDPD3-201ENST00000360688 MICALL2Q8IY33 904 aa19.54■□□□□ 0.72
GDPD3-201ENST00000360688 POLLQ9UGP5 575 aa19.54■□□□□ 0.72
GDPD3-201ENST00000360688 ZBTB12Q9Y330 459 aaPredicted RBP19.54■□□□□ 0.72
GDPD3-201ENST00000360688 H7C1D1 291 aa19.53■□□□□ 0.72
GDPD3-201ENST00000360688 PSMD14O00487 310 aa19.53■□□□□ 0.72
GDPD3-201ENST00000360688 IRS4O14654 1257 aaPredicted RBP19.53■□□□□ 0.72
GDPD3-201ENST00000360688 ZNF853P0CG23 659 aa19.53■□□□□ 0.72
GDPD3-201ENST00000360688 MAP2K2P36507 400 aa19.53■□□□□ 0.72
GDPD3-201ENST00000360688 GPSM2P81274 684 aa19.53■□□□□ 0.72
GDPD3-201ENST00000360688 CDC37L1Q7L3B6 337 aa19.53■□□□□ 0.72
GDPD3-201ENST00000360688 HHIPL1Q96JK4 782 aa19.53■□□□□ 0.72
GDPD3-201ENST00000360688 DBNDD1Q9H9R9 158 aa19.53■□□□□ 0.72
GDPD3-201ENST00000360688 C6orf229H3BNL8 230 aa19.52■□□□□ 0.72
GDPD3-201ENST00000360688 RIMBP2O15034 1052 aa19.52■□□□□ 0.72
GDPD3-201ENST00000360688 DPF2Q92785 391 aa19.52■□□□□ 0.72
GDPD3-201ENST00000360688 ZNF408Q9H9D4 720 aa19.52■□□□□ 0.72
GDPD3-201ENST00000360688 RPS8P62241 208 aaKnown RBP19.51■□□□□ 0.71
GDPD3-201ENST00000360688 RIC3Q7Z5B4 369 aa19.51■□□□□ 0.71
GDPD3-201ENST00000360688 ABHD8Q96I13 439 aa19.51■□□□□ 0.71
GDPD3-201ENST00000360688 PHAXQ9H814 394 aaKnown RBP19.51■□□□□ 0.71
GDPD3-201ENST00000360688 SCN9AQ15858 1988 aa19.51■□□□□ 0.71
GDPD3-201ENST00000360688 SAMD7Q7Z3H4 446 aa19.51■□□□□ 0.71
GDPD3-201ENST00000360688 USP48Q86UV5 1035 aa19.51■□□□□ 0.71
GDPD3-201ENST00000360688 ZBTB38Q8NAP3 1195 aaPredicted RBP19.51■□□□□ 0.71
GDPD3-201ENST00000360688 PRKRIP1Q9H875 184 aaPredicted RBP19.51■□□□□ 0.71
GDPD3-201ENST00000360688 KCNQ5Q9NR82 932 aa19.51■□□□□ 0.71
GDPD3-201ENST00000360688 RTL9Q8NET4 1388 aa19.5■□□□□ 0.71
GDPD3-201ENST00000360688 ELL2O00472 640 aaPredicted RBP19.5■□□□□ 0.71
GDPD3-201ENST00000360688 APAF1O14727 1248 aa19.5■□□□□ 0.71
GDPD3-201ENST00000360688 ECE2O60344 883 aa19.5■□□□□ 0.71
GDPD3-201ENST00000360688 EGFRP00533 1210 aa19.5■□□□□ 0.71
GDPD3-201ENST00000360688 GOLGA2Q08379 1002 aa19.5■□□□□ 0.71
GDPD3-201ENST00000360688 DOK7Q18PE1 504 aa19.5■□□□□ 0.71
GDPD3-201ENST00000360688 TBC1D16Q8TBP0 767 aa19.5■□□□□ 0.71
GDPD3-201ENST00000360688 EYA3Q99504 573 aa19.5■□□□□ 0.71
GDPD3-201ENST00000360688 IFT57Q9NWB7 429 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms