RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CAVIN2O95810 425 aa18.98■□□□□ 0.63
SCAF1-201ENST00000360565 SOGA3Q5TF21 947 aa18.98■□□□□ 0.63
SCAF1-201ENST00000360565 UBXN4Q92575 508 aa18.98■□□□□ 0.63
SCAF1-201ENST00000360565 TMEM2Q9UHN6 1383 aa18.98■□□□□ 0.63
SCAF1-201ENST00000360565 SSRP1Q08945 709 aaKnown RBP18.98■□□□□ 0.63
SCAF1-201ENST00000360565 TTF1Q15361 905 aaPredicted RBP18.98■□□□□ 0.63
SCAF1-201ENST00000360565 ZNF790Q6PG37 636 aa18.98■□□□□ 0.63
SCAF1-201ENST00000360565 CCDC186Q7Z3E2 898 aa18.98■□□□□ 0.63
SCAF1-201ENST00000360565 ADAMTS2O95450 1211 aa18.98■□□□□ 0.63
SCAF1-201ENST00000360565 NOLC1Q14978 699 aaKnown RBP eCLIP18.98■□□□□ 0.63
SCAF1-201ENST00000360565 DNAJC25Q9H1X3 360 aa18.98■□□□□ 0.63
SCAF1-201ENST00000360565 ZNF652Q9Y2D9 606 aa18.98■□□□□ 0.63
SCAF1-201ENST00000360565 ZFYP08048 801 aaPredicted RBP18.97■□□□□ 0.63
SCAF1-201ENST00000360565 IQCA1Q86XH1 822 aa18.97■□□□□ 0.63
SCAF1-201ENST00000360565 FAM227BQ96M60 508 aa18.97■□□□□ 0.63
SCAF1-201ENST00000360565 LMBRD1Q9NUN5 540 aa18.97■□□□□ 0.63
SCAF1-201ENST00000360565 METP08581 1390 aa18.97■□□□□ 0.63
SCAF1-201ENST00000360565 KIF24Q5T7B8 1368 aa18.97■□□□□ 0.63
SCAF1-201ENST00000360565 TOP1P11387 765 aaKnown RBP18.97■□□□□ 0.63
SCAF1-201ENST00000360565 C19orf44Q9H6X5 657 aa18.97■□□□□ 0.63
SCAF1-201ENST00000360565 RAD50Q92878 1312 aa18.97■□□□□ 0.63
SCAF1-201ENST00000360565 FAM173BQ6P4H8 233 aa18.97■□□□□ 0.63
SCAF1-201ENST00000360565 RUFY1Q96T51 708 aa18.97■□□□□ 0.63
SCAF1-201ENST00000360565 PDCL3Q9H2J4 239 aa18.97■□□□□ 0.63
SCAF1-201ENST00000360565 KIF2AO00139 706 aaPredicted RBP18.96■□□□□ 0.63
SCAF1-201ENST00000360565 DCAF5Q96JK2 942 aa18.96■□□□□ 0.63
SCAF1-201ENST00000360565 RNF41Q9H4P4 317 aaPredicted RBP18.96■□□□□ 0.63
SCAF1-201ENST00000360565 EIF4A1P60842 406 aaKnown RBP18.96■□□□□ 0.63
SCAF1-201ENST00000360565 CTCFLQ8NI51 663 aaPredicted RBP18.96■□□□□ 0.63
SCAF1-201ENST00000360565 CTDP1Q9Y5B0 961 aaPredicted RBP18.96■□□□□ 0.63
SCAF1-201ENST00000360565 TIMM10P62072 90 aa18.96■□□□□ 0.63
SCAF1-201ENST00000360565 TYRO3Q06418 890 aa18.96■□□□□ 0.63
SCAF1-201ENST00000360565 TMC6Q7Z403 805 aa18.96■□□□□ 0.63
SCAF1-201ENST00000360565 SIRT1Q96EB6 747 aa18.96■□□□□ 0.63
SCAF1-201ENST00000360565 CCDC43Q96MW1 224 aaKnown RBP18.96■□□□□ 0.63
SCAF1-201ENST00000360565 APOBRQ0VD83 1088 aa18.96■□□□□ 0.63
SCAF1-201ENST00000360565 SLC26A6Q9BXS9 759 aa18.96■□□□□ 0.63
SCAF1-201ENST00000360565 PKP1Q13835 747 aa18.95■□□□□ 0.62
SCAF1-201ENST00000360565 SLC9C2Q5TAH2 1124 aa18.95■□□□□ 0.62
SCAF1-201ENST00000360565 AOX1Q06278 1338 aa18.95■□□□□ 0.62
SCAF1-201ENST00000360565 KCNQ3O43525 872 aa18.95■□□□□ 0.62
SCAF1-201ENST00000360565 NEMFO60524 1076 aa18.94■□□□□ 0.62
SCAF1-201ENST00000360565 HS1BP3Q53T59 392 aa18.94■□□□□ 0.62
SCAF1-201ENST00000360565 TRPM1Q7Z4N2 1603 aa18.94■□□□□ 0.62
SCAF1-201ENST00000360565 PALD1Q9ULE6 856 aa18.94■□□□□ 0.62
SCAF1-201ENST00000360565 KRT18P05783 430 aaKnown RBP18.94■□□□□ 0.62
SCAF1-201ENST00000360565 DHX32Q7L7V1 743 aaKnown RBP18.94■□□□□ 0.62
SCAF1-201ENST00000360565 SUCLG2Q96I99 432 aa18.94■□□□□ 0.62
SCAF1-201ENST00000360565 DBNDD2Q9BQY9 259 aa18.94■□□□□ 0.62
SCAF1-201ENST00000360565 ARHGEF10O15013 1369 aa18.94■□□□□ 0.62
SCAF1-201ENST00000360565 URI1O94763 535 aaPredicted RBP18.94■□□□□ 0.62
SCAF1-201ENST00000360565 CD2BP2O95400 341 aaKnown RBP18.94■□□□□ 0.62
SCAF1-201ENST00000360565 CBX1P83916 185 aa18.94■□□□□ 0.62
SCAF1-201ENST00000360565 ARHGAP29Q52LW3 1261 aa18.94■□□□□ 0.62
SCAF1-201ENST00000360565 MFSD6Q6ZSS7 791 aa18.94■□□□□ 0.62
SCAF1-201ENST00000360565 SIRT2Q8IXJ6 389 aa18.94■□□□□ 0.62
SCAF1-201ENST00000360565 SSH3Q8TE77 659 aa18.94■□□□□ 0.62
SCAF1-201ENST00000360565 ZNF445P59923 1031 aa18.93■□□□□ 0.62
SCAF1-201ENST00000360565 ZHX3Q9H4I2 956 aa18.93■□□□□ 0.62
SCAF1-201ENST00000360565 EPB41L2O43491 1005 aaKnown RBP18.93■□□□□ 0.62
SCAF1-201ENST00000360565 HSPA4P34932 840 aa18.93■□□□□ 0.62
SCAF1-201ENST00000360565 CCDC129Q6ZRS4 1044 aa18.93■□□□□ 0.62
SCAF1-201ENST00000360565 SSBP05455 408 aaKnown RBP eCLIP18.93■□□□□ 0.62
SCAF1-201ENST00000360565 MRPS27Q92552 414 aaKnown RBP18.93■□□□□ 0.62
SCAF1-201ENST00000360565 PRC1O43663 620 aa18.93■□□□□ 0.62
SCAF1-201ENST00000360565 ZNF853P0CG23 659 aa18.93■□□□□ 0.62
SCAF1-201ENST00000360565 GSDMDP57764 484 aa18.93■□□□□ 0.62
SCAF1-201ENST00000360565 ALG1Q9BT22 464 aa18.93■□□□□ 0.62
SCAF1-201ENST00000360565 MKNK2Q9HBH9 465 aa18.93■□□□□ 0.62
SCAF1-201ENST00000360565 IQSEC3Q9UPP2 1182 aaPredicted RBP18.93■□□□□ 0.62
SCAF1-201ENST00000360565 ERCC6L2Q5T890 1561 aa18.92■□□□□ 0.62
SCAF1-201ENST00000360565 DYNC1I1O14576 645 aa18.92■□□□□ 0.62
SCAF1-201ENST00000360565 CCDC102BQ68D86 513 aa18.92■□□□□ 0.62
SCAF1-201ENST00000360565 ANTXR1Q9H6X2 564 aa18.92■□□□□ 0.62
SCAF1-201ENST00000360565 AATKQ6ZMQ8 1374 aa18.92■□□□□ 0.62
SCAF1-201ENST00000360565 MLH3Q9UHC1 1453 aa18.92■□□□□ 0.62
SCAF1-201ENST00000360565 SLC27A2O14975 620 aa18.92■□□□□ 0.62
SCAF1-201ENST00000360565 ZBTB43O43298 467 aa18.92■□□□□ 0.62
SCAF1-201ENST00000360565 USP5P45974 858 aa18.92■□□□□ 0.62
SCAF1-201ENST00000360565 PTPDC1A2A3K4 754 aa18.92■□□□□ 0.62
SCAF1-201ENST00000360565 SYKP43405 635 aa18.92■□□□□ 0.62
SCAF1-201ENST00000360565 ERCC4Q92889 916 aaPredicted RBP18.92■□□□□ 0.62
SCAF1-201ENST00000360565 PRIMPOLQ96LW4 560 aa18.92■□□□□ 0.62
SCAF1-201ENST00000360565 METTL22Q9BUU2 404 aaPredicted RBP18.92■□□□□ 0.62
SCAF1-201ENST00000360565 NDUFB9Q9Y6M9 179 aa18.92■□□□□ 0.62
SCAF1-201ENST00000360565 RNF113AO15541 343 aaKnown RBP18.91■□□□□ 0.62
SCAF1-201ENST00000360565 UQCRFS1P1P0C7P4 283 aa18.91■□□□□ 0.62
SCAF1-201ENST00000360565 MARCKSP29966 332 aaPredicted RBP18.91■□□□□ 0.62
SCAF1-201ENST00000360565 AK7Q96M32 723 aa18.91■□□□□ 0.62
SCAF1-201ENST00000360565 TMEM63CQ9P1W3 806 aa18.91■□□□□ 0.62
SCAF1-201ENST00000360565 GADD45BO75293 160 aaPredicted RBP18.91■□□□□ 0.62
SCAF1-201ENST00000360565 KCNG4Q8TDN1 519 aa18.91■□□□□ 0.62
SCAF1-201ENST00000360565 DEF6Q9H4E7 631 aa18.91■□□□□ 0.62
SCAF1-201ENST00000360565 IQGAP3Q86VI3 1631 aa18.91■□□□□ 0.62
SCAF1-201ENST00000360565 PIP4K2BP78356 416 aa18.91■□□□□ 0.62
SCAF1-201ENST00000360565 CHAMP1Q96JM3 812 aa18.91■□□□□ 0.62
SCAF1-201ENST00000360565 ZSCAN12O43309 604 aa18.91■□□□□ 0.62
SCAF1-201ENST00000360565 BRD1O95696 1058 aa18.91■□□□□ 0.62
SCAF1-201ENST00000360565 CPLX3Q8WVH0 158 aa18.91■□□□□ 0.62
SCAF1-201ENST00000360565 PKNOX2Q96KN3 472 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms