RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 MAP3K9P80192 1104 aa19.68■□□□□ 0.74
COL4A2-201ENST00000360467 ZNF804AQ7Z570 1209 aa19.68■□□□□ 0.74
COL4A2-201ENST00000360467 CCDC91Q7Z6B0 441 aa19.68■□□□□ 0.74
COL4A2-201ENST00000360467 SCAND2PQ9GZW5 306 aaPredicted RBP19.68■□□□□ 0.74
COL4A2-201ENST00000360467 TBCAO75347 108 aaKnown RBP19.68■□□□□ 0.74
COL4A2-201ENST00000360467 ZNF408Q9H9D4 720 aa19.68■□□□□ 0.74
COL4A2-201ENST00000360467 UBA7P41226 1012 aa19.68■□□□□ 0.74
COL4A2-201ENST00000360467 GOLGA6L10A0A0M3HER8 536 aa19.68■□□□□ 0.74
COL4A2-201ENST00000360467 GOLGA6L7A0A1B0GV03 622 aa19.68■□□□□ 0.74
COL4A2-201ENST00000360467 POLD1P28340 1107 aa19.68■□□□□ 0.74
COL4A2-201ENST00000360467 AMPD3Q01432 767 aa19.68■□□□□ 0.74
COL4A2-201ENST00000360467 ATP2B3Q16720 1220 aa19.67■□□□□ 0.74
COL4A2-201ENST00000360467 LMBR1LQ6UX01 489 aa19.67■□□□□ 0.74
COL4A2-201ENST00000360467 YEATS4O95619 227 aa19.67■□□□□ 0.74
COL4A2-201ENST00000360467 UQCRFS1P1P0C7P4 283 aa19.67■□□□□ 0.74
COL4A2-201ENST00000360467 MEIS3Q99687 375 aa19.67■□□□□ 0.74
COL4A2-201ENST00000360467 SYNCQ9H7C4 482 aa19.67■□□□□ 0.74
COL4A2-201ENST00000360467 EXOC1Q9NV70 894 aa19.67■□□□□ 0.74
COL4A2-201ENST00000360467 NSFL1CQ9UNZ2 370 aaKnown RBP19.67■□□□□ 0.74
COL4A2-201ENST00000360467 PTPN14Q15678 1187 aa19.67■□□□□ 0.74
COL4A2-201ENST00000360467 LMAN1P49257 510 aa19.67■□□□□ 0.74
COL4A2-201ENST00000360467 SAP30BPQ9UHR5 308 aaKnown RBP19.67■□□□□ 0.74
COL4A2-201ENST00000360467 UBXN4Q92575 508 aa19.66■□□□□ 0.74
COL4A2-201ENST00000360467 RTCBQ9Y3I0 505 aaKnown RBP19.66■□□□□ 0.74
COL4A2-201ENST00000360467 NCOA1Q15788 1441 aa19.66■□□□□ 0.74
COL4A2-201ENST00000360467 MAGEB6P1A0A0J9YX57 407 aa19.66■□□□□ 0.74
COL4A2-201ENST00000360467 SCAF11Q99590 1463 aaKnown RBP19.66■□□□□ 0.74
COL4A2-201ENST00000360467 CETN1Q12798 172 aa19.66■□□□□ 0.74
COL4A2-201ENST00000360467 HOOK3Q86VS8 718 aa19.66■□□□□ 0.74
COL4A2-201ENST00000360467 CRACR2AQ9BSW2 395 aa19.66■□□□□ 0.74
COL4A2-201ENST00000360467 USP25Q9UHP3 1055 aa19.66■□□□□ 0.74
COL4A2-201ENST00000360467 C14orf93Q9H972 538 aaKnown RBP19.65■□□□□ 0.74
COL4A2-201ENST00000360467 CCDC174Q6PII3 467 aa19.65■□□□□ 0.74
COL4A2-201ENST00000360467 SMARCC2Q8TAQ2 1214 aa19.65■□□□□ 0.74
COL4A2-201ENST00000360467 PKD2L1Q9P0L9 805 aa19.65■□□□□ 0.74
COL4A2-201ENST00000360467 GJC1P36383 396 aa19.65■□□□□ 0.74
COL4A2-201ENST00000360467 MAGEB6Q8N7X4 407 aa19.65■□□□□ 0.74
COL4A2-201ENST00000360467 BIN2Q9UBW5 565 aaPredicted RBP19.65■□□□□ 0.74
COL4A2-201ENST00000360467 SLC9C2Q5TAH2 1124 aa19.65■□□□□ 0.74
COL4A2-201ENST00000360467 BRF1Q92994 677 aa19.65■□□□□ 0.74
COL4A2-201ENST00000360467 CIZ1Q9ULV3 898 aaPredicted RBP19.65■□□□□ 0.74
COL4A2-201ENST00000360467 STX6O43752 255 aa19.64■□□□□ 0.74
COL4A2-201ENST00000360467 PHACTR2O75167 634 aa19.64■□□□□ 0.74
COL4A2-201ENST00000360467 NAPAP54920 295 aa19.64■□□□□ 0.74
COL4A2-201ENST00000360467 ZSCAN12O43309 604 aa19.64■□□□□ 0.73
COL4A2-201ENST00000360467 USO1O60763 962 aaKnown RBP19.64■□□□□ 0.73
COL4A2-201ENST00000360467 MCM5P33992 734 aa19.64■□□□□ 0.73
COL4A2-201ENST00000360467 CCDC66A2RUB6 948 aa19.64■□□□□ 0.73
COL4A2-201ENST00000360467 RHPN1Q8TCX5 695 aa19.64■□□□□ 0.73
COL4A2-201ENST00000360467 IGHDP01880 384 aa19.64■□□□□ 0.73
COL4A2-201ENST00000360467 HMGXB3Q12766 1538 aa19.64■□□□□ 0.73
COL4A2-201ENST00000360467 TRIM47Q96LD4 638 aa19.64■□□□□ 0.73
COL4A2-201ENST00000360467 IL2RBP14784 551 aa19.63■□□□□ 0.73
COL4A2-201ENST00000360467 TTC22Q5TAA0 569 aa19.63■□□□□ 0.73
COL4A2-201ENST00000360467 NPHP3Q7Z494 1330 aa19.63■□□□□ 0.73
COL4A2-201ENST00000360467 GNPATO15228 680 aa19.63■□□□□ 0.73
COL4A2-201ENST00000360467 STAT6P42226 847 aa19.63■□□□□ 0.73
COL4A2-201ENST00000360467 CUL7Q14999 1698 aa19.63■□□□□ 0.73
COL4A2-201ENST00000360467 HLTFQ14527 1009 aaKnown RBP eCLIP19.63■□□□□ 0.73
COL4A2-201ENST00000360467 RRAGBQ5VZM2 374 aa19.63■□□□□ 0.73
COL4A2-201ENST00000360467 TNPO1Q92973 898 aaKnown RBP19.63■□□□□ 0.73
COL4A2-201ENST00000360467 TMEM110-MUSTN1A8MSY1 372 aa19.63■□□□□ 0.73
COL4A2-201ENST00000360467 ALG1Q9BT22 464 aa19.63■□□□□ 0.73
COL4A2-201ENST00000360467 RXRAP19793 462 aa19.62■□□□□ 0.73
COL4A2-201ENST00000360467 CWF19L2Q2TBE0 894 aaKnown RBP19.62■□□□□ 0.73
COL4A2-201ENST00000360467 STXBP4Q6ZWJ1 553 aa19.62■□□□□ 0.73
COL4A2-201ENST00000360467 ZBTB43O43298 467 aa19.62■□□□□ 0.73
COL4A2-201ENST00000360467 RTN1Q16799 776 aa19.62■□□□□ 0.73
COL4A2-201ENST00000360467 Q6ZUG5 572 aa19.62■□□□□ 0.73
COL4A2-201ENST00000360467 LMTK3Q96Q04 1460 aa19.62■□□□□ 0.73
COL4A2-201ENST00000360467 WDR7Q9Y4E6 1490 aa19.62■□□□□ 0.73
COL4A2-201ENST00000360467 MARCKSP29966 332 aaPredicted RBP19.62■□□□□ 0.73
COL4A2-201ENST00000360467 MTERF4Q7Z6M4 381 aaKnown RBP19.62■□□□□ 0.73
COL4A2-201ENST00000360467 TMCO3Q6UWJ1 677 aa19.62■□□□□ 0.73
COL4A2-201ENST00000360467 CCDC24Q8N4L8 307 aa19.62■□□□□ 0.73
COL4A2-201ENST00000360467 BTG4Q9NY30 223 aa19.62■□□□□ 0.73
COL4A2-201ENST00000360467 JDP2Q8WYK2 163 aa19.61■□□□□ 0.73
COL4A2-201ENST00000360467 PLIN2Q99541 437 aa19.61■□□□□ 0.73
COL4A2-201ENST00000360467 KRT23Q9C075 422 aa19.61■□□□□ 0.73
COL4A2-201ENST00000360467 MRVI1Q9Y6F6 885 aa19.61■□□□□ 0.73
COL4A2-201ENST00000360467 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.61■□□□□ 0.73
COL4A2-201ENST00000360467 NF2P35240 595 aa19.61■□□□□ 0.73
COL4A2-201ENST00000360467 ZBTB9Q96C00 473 aa19.61■□□□□ 0.73
COL4A2-201ENST00000360467 ZC3H12CQ9C0D7 883 aaKnown RBP19.61■□□□□ 0.73
COL4A2-201ENST00000360467 TTC21AQ8NDW8 1320 aa19.61■□□□□ 0.73
COL4A2-201ENST00000360467 DHX29Q7Z478 1369 aaKnown RBP19.61■□□□□ 0.73
COL4A2-201ENST00000360467 MCM9Q9NXL9 1143 aa19.61■□□□□ 0.73
COL4A2-201ENST00000360467 IRS4O14654 1257 aaPredicted RBP19.61■□□□□ 0.73
COL4A2-201ENST00000360467 MRPS9P82933 396 aaKnown RBP19.61■□□□□ 0.73
COL4A2-201ENST00000360467 PRKG1Q13976 671 aa19.61■□□□□ 0.73
COL4A2-201ENST00000360467 C8orf58Q8NAV2 365 aa19.61■□□□□ 0.73
COL4A2-201ENST00000360467 ZKSCAN3Q9BRR0 538 aa19.61■□□□□ 0.73
COL4A2-201ENST00000360467 NYXQ9GZU5 481 aa19.61■□□□□ 0.73
COL4A2-201ENST00000360467 ZGPATQ8N5A5 531 aaKnown RBP19.6■□□□□ 0.73
COL4A2-201ENST00000360467 C16orf45Q96MC5 204 aaPredicted RBP19.6■□□□□ 0.73
COL4A2-201ENST00000360467 ZSWIM4Q9H7M6 989 aa19.6■□□□□ 0.73
COL4A2-201ENST00000360467 MTHFSDQ2M296 383 aaKnown RBP19.6■□□□□ 0.73
COL4A2-201ENST00000360467 GRM8O00222 908 aa19.6■□□□□ 0.73
COL4A2-201ENST00000360467 STX1AQ16623 288 aa19.6■□□□□ 0.73
COL4A2-201ENST00000360467 AKAP4Q5JQC9 854 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms