RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ERMNQ8TAM6 284 aa20.7■□□□□ 0.9
COL18A1-202ENST00000355480 OGFOD1Q8N543 542 aa20.69■□□□□ 0.9
COL18A1-202ENST00000355480 EXOC1Q9NV70 894 aa20.69■□□□□ 0.9
COL18A1-202ENST00000355480 GCOM1H8Y6P7 765 aaPredicted RBP20.69■□□□□ 0.9
COL18A1-202ENST00000355480 MYZAPP0CAP1 466 aa20.69■□□□□ 0.9
COL18A1-202ENST00000355480 PICALMQ13492 652 aa20.69■□□□□ 0.9
COL18A1-202ENST00000355480 ESR2Q92731 530 aa20.69■□□□□ 0.9
COL18A1-202ENST00000355480 MMRN2Q9H8L6 949 aa20.69■□□□□ 0.9
COL18A1-202ENST00000355480 BCCIPQ9P287 314 aaKnown RBP eCLIP20.69■□□□□ 0.9
COL18A1-202ENST00000355480 NPHP3Q7Z494 1330 aa20.69■□□□□ 0.9
COL18A1-202ENST00000355480 ERICH4A6NGS2 130 aa20.69■□□□□ 0.9
COL18A1-202ENST00000355480 TOM1O60784 492 aa20.69■□□□□ 0.9
COL18A1-202ENST00000355480 NIP7Q9Y221 180 aaKnown RBP eCLIP20.69■□□□□ 0.9
COL18A1-202ENST00000355480 COMMD10Q9Y6G5 202 aa20.69■□□□□ 0.9
COL18A1-202ENST00000355480 DISP3Q9P2K9 1392 aa20.69■□□□□ 0.9
COL18A1-202ENST00000355480 SHTN1A0MZ66 631 aa20.69■□□□□ 0.9
COL18A1-202ENST00000355480 ZBTB43O43298 467 aa20.69■□□□□ 0.9
COL18A1-202ENST00000355480 TAOK3Q9H2K8 898 aa20.69■□□□□ 0.9
COL18A1-202ENST00000355480 GSDMDP57764 484 aa20.68■□□□□ 0.9
COL18A1-202ENST00000355480 C8orf37Q96NL8 207 aa20.68■□□□□ 0.9
COL18A1-202ENST00000355480 SMARCC1Q92922 1105 aaPredicted RBP20.68■□□□□ 0.9
COL18A1-202ENST00000355480 TRIM47Q96LD4 638 aa20.68■□□□□ 0.9
COL18A1-202ENST00000355480 HLTFQ14527 1009 aaKnown RBP eCLIP20.68■□□□□ 0.96e-6■□□□□ 11.2
COL18A1-202ENST00000355480 NAA16Q6N069 864 aaPredicted RBP20.68■□□□□ 0.9
COL18A1-202ENST00000355480 GOLGA6L10A0A0M3HER8 536 aa20.67■□□□□ 0.9
COL18A1-202ENST00000355480 SPECC1Q5M775 1068 aa20.67■□□□□ 0.9
COL18A1-202ENST00000355480 LMBR1LQ6UX01 489 aa20.67■□□□□ 0.9
COL18A1-202ENST00000355480 INCENPQ9NQS7 918 aa20.67■□□□□ 0.9
COL18A1-202ENST00000355480 MEIS3Q99687 375 aa20.67■□□□□ 0.9
COL18A1-202ENST00000355480 NAA15Q9BXJ9 866 aaKnown RBP20.67■□□□□ 0.9
COL18A1-202ENST00000355480 CNNM2Q9H8M5 875 aa20.67■□□□□ 0.9
COL18A1-202ENST00000355480 DDB1Q16531 1140 aa20.67■□□□□ 0.9
COL18A1-202ENST00000355480 HEATR3Q7Z4Q2 680 aa20.67■□□□□ 0.9
COL18A1-202ENST00000355480 NEMFO60524 1076 aa20.67■□□□□ 0.9
COL18A1-202ENST00000355480 LRRC2Q9BYS8 371 aa20.66■□□□□ 0.9
COL18A1-202ENST00000355480 RBM25P49756 843 aaKnown RBP20.66■□□□□ 0.9
COL18A1-202ENST00000355480 TRAF1Q13077 416 aa20.66■□□□□ 0.9
COL18A1-202ENST00000355480 TMTC2Q8N394 836 aa20.66■□□□□ 0.9
COL18A1-202ENST00000355480 UBE4AQ14139 1066 aa20.66■□□□□ 0.9
COL18A1-202ENST00000355480 PPP4R3BQ5MIZ7 849 aa20.66■□□□□ 0.9
COL18A1-202ENST00000355480 ZSCAN16Q9H4T2 348 aaPredicted RBP20.66■□□□□ 0.9
COL18A1-202ENST00000355480 GRM8O00222 908 aa20.66■□□□□ 0.9
COL18A1-202ENST00000355480 RTN1Q16799 776 aa20.66■□□□□ 0.9
COL18A1-202ENST00000355480 NECAB1Q8N987 351 aa20.66■□□□□ 0.9
COL18A1-202ENST00000355480 UTP14AQ9BVJ6 771 aaKnown RBP20.66■□□□□ 0.9
COL18A1-202ENST00000355480 ZNF165P49910 485 aa20.65■□□□□ 0.9
COL18A1-202ENST00000355480 ZNF804AQ7Z570 1209 aa20.65■□□□□ 0.9
COL18A1-202ENST00000355480 RMND1Q9NWS8 449 aa20.65■□□□□ 0.9
COL18A1-202ENST00000355480 AKAP4Q5JQC9 854 aa20.65■□□□□ 0.9
COL18A1-202ENST00000355480 ALG1Q9BT22 464 aa20.65■□□□□ 0.9
COL18A1-202ENST00000355480 GRM1Q13255 1194 aa20.65■□□□□ 0.9
COL18A1-202ENST00000355480 STAMBPO95630 424 aa20.65■□□□□ 0.9
COL18A1-202ENST00000355480 C16orf45Q96MC5 204 aaPredicted RBP20.65■□□□□ 0.9
COL18A1-202ENST00000355480 CLEC11AQ9Y240 323 aa20.65■□□□□ 0.9
COL18A1-202ENST00000355480 CUL7Q14999 1698 aa20.65■□□□□ 0.9
COL18A1-202ENST00000355480 SMC1AQ14683 1233 aaKnown RBP20.65■□□□□ 0.9
COL18A1-202ENST00000355480 IL15P40933 162 aaPredicted RBP20.64■□□□□ 0.9
COL18A1-202ENST00000355480 SYKP43405 635 aa20.64■□□□□ 0.9
COL18A1-202ENST00000355480 SLC9C2Q5TAH2 1124 aa20.64■□□□□ 0.9
COL18A1-202ENST00000355480 N4BP3O15049 544 aa20.64■□□□□ 0.89
COL18A1-202ENST00000355480 UBE2HP62256 183 aa20.64■□□□□ 0.89
COL18A1-202ENST00000355480 ALDH1L1O75891 902 aa20.63■□□□□ 0.89
COL18A1-202ENST00000355480 RRAGBQ5VZM2 374 aa20.63■□□□□ 0.89
COL18A1-202ENST00000355480 STAT6P42226 847 aa20.63■□□□□ 0.89
COL18A1-202ENST00000355480 MCMDC2Q4G0Z9 681 aa20.63■□□□□ 0.89
COL18A1-202ENST00000355480 KSR2Q6VAB6 950 aa20.63■□□□□ 0.89
COL18A1-202ENST00000355480 ARHGAP45Q92619 1136 aa20.63■□□□□ 0.89
COL18A1-202ENST00000355480 FERMT1Q9BQL6 677 aa20.63■□□□□ 0.89
COL18A1-202ENST00000355480 AFMP43652 599 aa20.63■□□□□ 0.89
COL18A1-202ENST00000355480 GNAQP50148 359 aa20.63■□□□□ 0.89
COL18A1-202ENST00000355480 BMP15O95972 392 aa20.63■□□□□ 0.89
COL18A1-202ENST00000355480 IGHDP01880 384 aa20.63■□□□□ 0.89
COL18A1-202ENST00000355480 SDSP20132 328 aa20.63■□□□□ 0.89
COL18A1-202ENST00000355480 VTI1AQ96AJ9 217 aa20.63■□□□□ 0.89
COL18A1-202ENST00000355480 CA8P35219 290 aa20.62■□□□□ 0.89
COL18A1-202ENST00000355480 TCEANC2Q96MN5 208 aa20.62■□□□□ 0.89
COL18A1-202ENST00000355480 NYXQ9GZU5 481 aa20.62■□□□□ 0.89
COL18A1-202ENST00000355480 PPIP5K1Q6PFW1 1433 aa20.62■□□□□ 0.89
COL18A1-202ENST00000355480 DZIP3Q86Y13 1208 aaKnown RBP20.62■□□□□ 0.89
COL18A1-202ENST00000355480 SIRT1Q96EB6 747 aa20.62■□□□□ 0.89
COL18A1-202ENST00000355480 RBM8AQ9Y5S9 174 aaKnown RBP20.62■□□□□ 0.89
COL18A1-202ENST00000355480 ADCY5O95622 1261 aa20.62■□□□□ 0.89
COL18A1-202ENST00000355480 ACTN2P35609 894 aa20.62■□□□□ 0.89
COL18A1-202ENST00000355480 SMARCC2Q8TAQ2 1214 aa20.62■□□□□ 0.89
COL18A1-202ENST00000355480 PSMD1Q99460 953 aa20.62■□□□□ 0.89
COL18A1-202ENST00000355480 SYNCQ9H7C4 482 aa20.62■□□□□ 0.89
COL18A1-202ENST00000355480 VEZTQ9HBM0 779 aa20.62■□□□□ 0.89
COL18A1-202ENST00000355480 CCDC172P0C7W6 258 aa20.62■□□□□ 0.89
COL18A1-202ENST00000355480 NAPAP54920 295 aa20.62■□□□□ 0.89
COL18A1-202ENST00000355480 JADE2Q9NQC1 790 aa20.62■□□□□ 0.89
COL18A1-202ENST00000355480 TBC1D5Q92609 795 aa20.61■□□□□ 0.89
COL18A1-202ENST00000355480 NUCB1Q02818 461 aa20.61■□□□□ 0.89
COL18A1-202ENST00000355480 USP37Q86T82 979 aa20.61■□□□□ 0.89
COL18A1-202ENST00000355480 LAMC3Q9Y6N6 1575 aa20.61■□□□□ 0.89
COL18A1-202ENST00000355480 AKR1B10O60218 316 aa20.61■□□□□ 0.89
COL18A1-202ENST00000355480 TMX3Q96JJ7 454 aa20.61■□□□□ 0.89
COL18A1-202ENST00000355480 MAGEB6P1A0A0J9YX57 407 aa20.6■□□□□ 0.89
COL18A1-202ENST00000355480 PHACTR2O75167 634 aa20.6■□□□□ 0.89
COL18A1-202ENST00000355480 IL2RBP14784 551 aa20.6■□□□□ 0.89
COL18A1-202ENST00000355480 CABLES1Q8TDN4 633 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms