RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 SLFN5Q08AF3 891 aa25.83■■□□□ 1.73
HCFC1R1-202ENST00000354679 CWF19L2Q2TBE0 894 aaKnown RBP25.83■■□□□ 1.73
HCFC1R1-202ENST00000354679 DPY19L2Q6NUT2 758 aa25.83■■□□□ 1.73
HCFC1R1-202ENST00000354679 RRAGCQ9HB90 399 aa25.83■■□□□ 1.73
HCFC1R1-202ENST00000354679 SP8Q8IXZ3 490 aa25.82■■□□□ 1.72
HCFC1R1-202ENST00000354679 CDHR2Q9BYE9 1310 aa25.82■■□□□ 1.72
HCFC1R1-202ENST00000354679 TMC4Q7Z404 712 aa25.81■■□□□ 1.72
HCFC1R1-202ENST00000354679 PDE8AO60658 829 aa25.8■■□□□ 1.72
HCFC1R1-202ENST00000354679 CELF1Q92879 486 aaKnown RBP25.8■■□□□ 1.72
HCFC1R1-202ENST00000354679 CDCA7LQ96GN5 454 aa25.8■■□□□ 1.72
HCFC1R1-202ENST00000354679 TAF1P21675 1872 aa25.8■■□□□ 1.72
HCFC1R1-202ENST00000354679 TOMM70O94826 608 aa25.79■■□□□ 1.72
HCFC1R1-202ENST00000354679 CCDC152Q4G0S7 254 aa25.78■■□□□ 1.72
HCFC1R1-202ENST00000354679 C16orf71Q8IYS4 520 aaPredicted RBP25.78■■□□□ 1.72
HCFC1R1-202ENST00000354679 LINS1Q8NG48 757 aa25.78■■□□□ 1.72
HCFC1R1-202ENST00000354679 F6X3S4 739 aa25.77■■□□□ 1.72
HCFC1R1-202ENST00000354679 GCKRQ14397 625 aa25.77■■□□□ 1.72
HCFC1R1-202ENST00000354679 DPP8Q6V1X1 898 aaPredicted RBP25.77■■□□□ 1.72
HCFC1R1-202ENST00000354679 MPNDQ8N594 471 aa25.77■■□□□ 1.72
HCFC1R1-202ENST00000354679 JDP2Q8WYK2 163 aa25.77■■□□□ 1.72
HCFC1R1-202ENST00000354679 WDR90Q96KV7 1748 aa25.77■■□□□ 1.72
HCFC1R1-202ENST00000354679 H7C1W4 665 aa25.76■■□□□ 1.71
HCFC1R1-202ENST00000354679 DDNO94850 711 aaPredicted RBP25.76■■□□□ 1.71
HCFC1R1-202ENST00000354679 VEGFAP15692 232 aaPredicted RBP25.76■■□□□ 1.71
HCFC1R1-202ENST00000354679 LARGE2Q8N3Y3 721 aa25.76■■□□□ 1.71
HCFC1R1-202ENST00000354679 SUPT20HQ8NEM7 779 aa25.76■■□□□ 1.71
HCFC1R1-202ENST00000354679 RTFDC1Q9BY42 306 aaPredicted RBP25.76■■□□□ 1.71
HCFC1R1-202ENST00000354679 SEC31BQ9NQW1 1179 aa25.76■■□□□ 1.71
HCFC1R1-202ENST00000354679 COL4A1P02462 1669 aa25.76■■□□□ 1.71
HCFC1R1-202ENST00000354679 LRRC37AA6NMS7 1700 aa25.75■■□□□ 1.71
HCFC1R1-202ENST00000354679 ZNF541Q9H0D2 1346 aa25.75■■□□□ 1.71
HCFC1R1-202ENST00000354679 UBE3BQ7Z3V4 1068 aa25.75■■□□□ 1.71
HCFC1R1-202ENST00000354679 TRMT2AQ8IZ69 625 aaKnown RBP25.75■■□□□ 1.71
HCFC1R1-202ENST00000354679 CCDC85AQ96PX6 553 aaPredicted RBP25.75■■□□□ 1.71
HCFC1R1-202ENST00000354679 COL4A5P29400 1685 aa25.74■■□□□ 1.71
HCFC1R1-202ENST00000354679 FZD9O00144 591 aa25.74■■□□□ 1.71
HCFC1R1-202ENST00000354679 PPIP5K2O43314 1243 aa25.74■■□□□ 1.71
HCFC1R1-202ENST00000354679 CTSWP56202 376 aa25.74■■□□□ 1.71
HCFC1R1-202ENST00000354679 RPS8P62241 208 aaKnown RBP25.74■■□□□ 1.71
HCFC1R1-202ENST00000354679 RBM46Q8TBY0 533 aaKnown RBP25.74■■□□□ 1.71
HCFC1R1-202ENST00000354679 POTECB2RU33 542 aa25.73■■□□□ 1.71
HCFC1R1-202ENST00000354679 BEND3Q5T5X7 828 aa25.73■■□□□ 1.71
HCFC1R1-202ENST00000354679 MRPL50Q8N5N7 158 aaKnown RBP25.73■■□□□ 1.71
HCFC1R1-202ENST00000354679 VPS33BQ9H267 617 aa25.73■■□□□ 1.71
HCFC1R1-202ENST00000354679 AOC3Q16853 763 aa25.72■■□□□ 1.71
HCFC1R1-202ENST00000354679 CASP7P55210 303 aa25.71■■□□□ 1.71
HCFC1R1-202ENST00000354679 NIM1KQ8IY84 436 aa25.71■■□□□ 1.71
HCFC1R1-202ENST00000354679 DUOX1Q9NRD9 1551 aa25.7■■□□□ 1.71
HCFC1R1-202ENST00000354679 EIF6P56537 245 aaKnown RBP25.7■■□□□ 1.7
HCFC1R1-202ENST00000354679 TTLL11Q8NHH1 800 aa25.7■■□□□ 1.7
HCFC1R1-202ENST00000354679 SSH1Q8WYL5 1049 aa25.7■■□□□ 1.7
HCFC1R1-202ENST00000354679 L3MBTL3Q96JM7 780 aaPredicted RBP25.7■■□□□ 1.7
HCFC1R1-202ENST00000354679 PLA2G12BQ9BX93 195 aa25.7■■□□□ 1.7
HCFC1R1-202ENST00000354679 MYH3P11055 1940 aa25.69■■□□□ 1.7
HCFC1R1-202ENST00000354679 NSFL1CQ9UNZ2 370 aaKnown RBP25.69■■□□□ 1.7
HCFC1R1-202ENST00000354679 GPSM2P81274 684 aa25.68■■□□□ 1.7
HCFC1R1-202ENST00000354679 KIAA2012Q0VF49 1180 aa25.68■■□□□ 1.7
HCFC1R1-202ENST00000354679 SLC4A10Q6U841 1118 aa25.68■■□□□ 1.7
HCFC1R1-202ENST00000354679 ANKRD18AQ8IVF6 992 aa25.68■■□□□ 1.7
HCFC1R1-202ENST00000354679 GREM2Q9H772 168 aa25.68■■□□□ 1.7
HCFC1R1-202ENST00000354679 HSPA6P17066 643 aa25.67■■□□□ 1.7
HCFC1R1-202ENST00000354679 ALDH1L2Q3SY69 923 aa25.67■■□□□ 1.7
HCFC1R1-202ENST00000354679 GPC2Q8N158 579 aa25.67■■□□□ 1.7
HCFC1R1-202ENST00000354679 CDC5LQ99459 802 aaKnown RBP25.67■■□□□ 1.7
HCFC1R1-202ENST00000354679 BCL2L13Q9BXK5 485 aa25.67■■□□□ 1.7
HCFC1R1-202ENST00000354679 RTL9Q8NET4 1388 aa25.67■■□□□ 1.7
HCFC1R1-202ENST00000354679 PTPRCP08575 1304 aa25.66■■□□□ 1.7
HCFC1R1-202ENST00000354679 IQCA1LA6NCM1 817 aa25.66■■□□□ 1.7
HCFC1R1-202ENST00000354679 CT47B1P0C2W7 299 aaPredicted RBP25.66■■□□□ 1.7
HCFC1R1-202ENST00000354679 FSTL1Q12841 308 aa25.66■■□□□ 1.7
HCFC1R1-202ENST00000354679 ALDH1L1O75891 902 aa25.65■■□□□ 1.7
HCFC1R1-202ENST00000354679 SMC1BQ8NDV3 1235 aa25.65■■□□□ 1.7
HCFC1R1-202ENST00000354679 SRCIN1Q9C0H9 1055 aa25.65■■□□□ 1.7
HCFC1R1-202ENST00000354679 GJA3Q9Y6H8 435 aa25.65■■□□□ 1.7
HCFC1R1-202ENST00000354679 CEP350Q5VT06 3117 aa25.65■■□□□ 1.7
HCFC1R1-202ENST00000354679 LTBP1Q14766 1721 aa25.64■■□□□ 1.7
HCFC1R1-202ENST00000354679 C6orf229H3BNL8 230 aa25.64■■□□□ 1.7
HCFC1R1-202ENST00000354679 SMC4Q9NTJ3 1288 aa25.64■■□□□ 1.7
HCFC1R1-202ENST00000354679 POLLQ9UGP5 575 aa25.64■■□□□ 1.7
HCFC1R1-202ENST00000354679 ZNRF3Q9ULT6 936 aa25.64■■□□□ 1.7
HCFC1R1-202ENST00000354679 SCN4AP35499 1836 aa25.63■■□□□ 1.69
HCFC1R1-202ENST00000354679 GRM8O00222 908 aa25.63■■□□□ 1.69
HCFC1R1-202ENST00000354679 WASHC4Q2M389 1173 aa25.63■■□□□ 1.69
HCFC1R1-202ENST00000354679 PODXL2Q9NZ53 605 aa25.63■■□□□ 1.69
HCFC1R1-202ENST00000354679 ANKIB1Q9P2G1 1089 aa25.63■■□□□ 1.69
HCFC1R1-202ENST00000354679 CSF1RP07333 972 aa25.62■■□□□ 1.69
HCFC1R1-202ENST00000354679 HNRNPUQ00839 825 aaKnown RBP eCLIP25.62■■□□□ 1.69
HCFC1R1-202ENST00000354679 FAM161AQ3B820 660 aa25.62■■□□□ 1.69
HCFC1R1-202ENST00000354679 TBC1D16Q8TBP0 767 aa25.62■■□□□ 1.69
HCFC1R1-202ENST00000354679 EYA3Q99504 573 aa25.62■■□□□ 1.69
HCFC1R1-202ENST00000354679 C9orf78Q9NZ63 289 aaPredicted RBP25.62■■□□□ 1.69
HCFC1R1-202ENST00000354679 HACL1Q9UJ83 578 aa25.62■■□□□ 1.69
HCFC1R1-202ENST00000354679 TAF1DQ9H5J8 278 aaPredicted RBP25.61■■□□□ 1.69
HCFC1R1-202ENST00000354679 BSDC1Q9NW68 430 aaPredicted RBP25.61■■□□□ 1.69
HCFC1R1-202ENST00000354679 RIMBP2O15034 1052 aa25.6■■□□□ 1.69
HCFC1R1-202ENST00000354679 UFL1O94874 794 aa25.6■■□□□ 1.69
HCFC1R1-202ENST00000354679 ITGA6P23229 1130 aa25.6■■□□□ 1.69
HCFC1R1-202ENST00000354679 GGA1Q9UJY5 639 aa25.6■■□□□ 1.69
HCFC1R1-202ENST00000354679 XDHP47989 1333 aa25.6■■□□□ 1.69
HCFC1R1-202ENST00000354679 IGHMBP2P38935 993 aaKnown RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms