RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 ANKRD24Q8TF21 1146 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 LARSQ9P2J5 1176 aaKnown RBP9.48□□□□□ -0.89
MCPH1-201ENST00000344683 CCDC88BA6NC98 1476 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 TERF1P54274 439 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 EIF2AQ9BY44 585 aaKnown RBP9.47□□□□□ -0.89
MCPH1-201ENST00000344683 PEG3Q9GZU2 1588 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 RLBP1P12271 317 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 TCP11L2Q8N4U5 519 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 CUL5Q93034 780 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 UBA5Q9GZZ9 404 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 SPATS2LQ9NUQ6 558 aaKnown RBP9.47□□□□□ -0.89
MCPH1-201ENST00000344683 BMP15O95972 392 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 CLUL1Q15846 466 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 KIF1BPQ96EK5 621 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 MINK1Q8N4C8 1332 aaPredicted RBP9.47□□□□□ -0.89
MCPH1-201ENST00000344683 N4BP3O15049 544 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 AKR1B10O60218 316 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 SYT1P21579 422 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 ERO1AQ96HE7 468 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 HDAC9Q9UKV0 1011 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 TDRD9Q8NDG6 1382 aaKnown RBP9.47□□□□□ -0.89
MCPH1-201ENST00000344683 SUPT6HQ7KZ85 1726 aaKnown RBP9.47□□□□□ -0.89
MCPH1-201ENST00000344683 PLEKHO1Q53GL0 409 aaPredicted RBP9.47□□□□□ -0.89
MCPH1-201ENST00000344683 MCUR1Q96AQ8 359 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 AIDAQ96BJ3 306 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 TRIM4Q9C037 500 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 SLC12A7Q9Y666 1083 aa9.47□□□□□ -0.89
MCPH1-201ENST00000344683 MYO1BO43795 1136 aa9.46□□□□□ -0.89
MCPH1-201ENST00000344683 GAS8O95995 478 aa9.46□□□□□ -0.89
MCPH1-201ENST00000344683 KCNK9Q9NPC2 374 aa9.46□□□□□ -0.89
MCPH1-201ENST00000344683 PPFIA3O75145 1194 aa9.46□□□□□ -0.89
MCPH1-201ENST00000344683 SLC4A2P04920 1241 aa9.46□□□□□ -0.89
MCPH1-201ENST00000344683 ARL1P40616 181 aaPredicted RBP9.46□□□□□ -0.89
MCPH1-201ENST00000344683 NLRP5P59047 1200 aa9.46□□□□□ -0.89
MCPH1-201ENST00000344683 NUTM1Q86Y26 1132 aa9.46□□□□□ -0.89
MCPH1-201ENST00000344683 FAM200AQ8TCP9 573 aa9.46□□□□□ -0.89
MCPH1-201ENST00000344683 BICD1Q96G01 975 aa9.46□□□□□ -0.89
MCPH1-201ENST00000344683 MPHOSPH8Q99549 860 aa9.46□□□□□ -0.89
MCPH1-201ENST00000344683 NDUFAB1O14561 156 aa9.46□□□□□ -0.89
MCPH1-201ENST00000344683 ERCC3P19447 782 aa9.46□□□□□ -0.9
MCPH1-201ENST00000344683 EXOSC9Q06265 439 aaKnown RBP9.46□□□□□ -0.9
MCPH1-201ENST00000344683 ANO6Q4KMQ2 910 aa9.46□□□□□ -0.9
MCPH1-201ENST00000344683 KCNG4Q8TDN1 519 aa9.46□□□□□ -0.9
MCPH1-201ENST00000344683 ZC4H2Q9NQZ6 224 aa9.46□□□□□ -0.9
MCPH1-201ENST00000344683 ERICH3Q5RHP9 1530 aa9.46□□□□□ -0.9
MCPH1-201ENST00000344683 VIMP08670 466 aaKnown RBP9.46□□□□□ -0.9
MCPH1-201ENST00000344683 USP5P45974 858 aa9.46□□□□□ -0.9
MCPH1-201ENST00000344683 NCAPGQ9BPX3 1015 aa9.46□□□□□ -0.9
MCPH1-201ENST00000344683 GOLGA6CA6NDK9 693 aa9.46□□□□□ -0.9
MCPH1-201ENST00000344683 GOLGA6DP0CG33 693 aa9.46□□□□□ -0.9
MCPH1-201ENST00000344683 UBLCP1Q8WVY7 318 aaPredicted RBP9.46□□□□□ -0.9
MCPH1-201ENST00000344683 ARHGEF2Q92974 986 aaKnown RBP9.46□□□□□ -0.9
MCPH1-201ENST00000344683 GOLGA6AQ9NYA3 693 aa9.46□□□□□ -0.9
MCPH1-201ENST00000344683 SSFA2P28290 1259 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 SIL1Q9H173 461 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 RNF41Q9H4P4 317 aaPredicted RBP9.45□□□□□ -0.9
MCPH1-201ENST00000344683 PPM1FP49593 454 aaPredicted RBP9.45□□□□□ -0.9
MCPH1-201ENST00000344683 DBN1Q16643 649 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 SLC4A8Q2Y0W8 1093 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 PAXIP1Q6ZW49 1069 aaPredicted RBP9.45□□□□□ -0.9
MCPH1-201ENST00000344683 SYCP3Q8IZU3 236 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 CSRNP2Q9H175 543 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 UTP11Q9Y3A2 253 aaKnown RBP9.45□□□□□ -0.9
MCPH1-201ENST00000344683 TACC3Q9Y6A5 838 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 NUTM2FA1L443 756 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 SPTY2D1Q68D10 685 aaPredicted RBP9.45□□□□□ -0.9
MCPH1-201ENST00000344683 RUFY3Q7L099 469 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 CATIPQ7Z7H3 387 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.45□□□□□ -0.9
MCPH1-201ENST00000344683 C11orf95C9JLR9 678 aaPredicted RBP9.45□□□□□ -0.9
MCPH1-201ENST00000344683 NUTM2DQ5VT03 806 aaPredicted RBP9.45□□□□□ -0.9
MCPH1-201ENST00000344683 SDCCAG8Q86SQ7 713 aaPredicted RBP9.45□□□□□ -0.9
MCPH1-201ENST00000344683 IQCA1Q86XH1 822 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 TBC1D2Q9BYX2 928 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 HSP90AA5PQ58FG0 334 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 RUFY4Q6ZNE9 571 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 SYNCQ9H7C4 482 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 CETN3O15182 167 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 SRGAP3O43295 1099 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 PFDN1O60925 122 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 GJB2P29033 226 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 SYKP43405 635 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 TRIM47Q96LD4 638 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 HAUS8Q9BT25 410 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 HMG20BQ9P0W2 317 aa9.45□□□□□ -0.9
MCPH1-201ENST00000344683 ATAD2Q6PL18 1390 aa9.44□□□□□ -0.9
MCPH1-201ENST00000344683 FANCD2Q9BXW9 1451 aa9.44□□□□□ -0.9
MCPH1-201ENST00000344683 MUM1Q2TAK8 710 aa9.44□□□□□ -0.9
MCPH1-201ENST00000344683 HDGFL1Q5TGJ6 251 aa9.44□□□□□ -0.9
MCPH1-201ENST00000344683 CCDC194A0A1B0GVG4 234 aa9.44□□□□□ -0.9
MCPH1-201ENST00000344683 MTHFSP49914 203 aa9.44□□□□□ -0.9
MCPH1-201ENST00000344683 CCT6BQ92526 530 aa9.44□□□□□ -0.9
MCPH1-201ENST00000344683 PSMD1Q99460 953 aa9.44□□□□□ -0.9
MCPH1-201ENST00000344683 MYOM3Q5VTT5 1437 aa9.44□□□□□ -0.9
MCPH1-201ENST00000344683 TCERG1LQ5VWI1 586 aa9.44□□□□□ -0.9
MCPH1-201ENST00000344683 PPP2R3AQ06190 1150 aa9.44□□□□□ -0.9
MCPH1-201ENST00000344683 PPP1R7Q15435 360 aa9.44□□□□□ -0.9
MCPH1-201ENST00000344683 ZNF622Q969S3 477 aaKnown RBP eCLIP9.44□□□□□ -0.9
MCPH1-201ENST00000344683 PPP2R1AP30153 589 aa9.44□□□□□ -0.9
MCPH1-201ENST00000344683 IFT20Q8IY31 132 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms