RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 THRAP3Q9Y2W1 955 aaKnown RBP19.21■□□□□ 0.67
SMARCA4-201ENST00000344626 CCDC191Q8NCU4 936 aa19.21■□□□□ 0.67
SMARCA4-201ENST00000344626 CUL5Q93034 780 aa19.21■□□□□ 0.67
SMARCA4-201ENST00000344626 SLC12A7Q9Y666 1083 aa19.21■□□□□ 0.67
SMARCA4-201ENST00000344626 KCNQ3O43525 872 aa19.21■□□□□ 0.67
SMARCA4-201ENST00000344626 LDHBP07195 334 aaKnown RBP19.21■□□□□ 0.67
SMARCA4-201ENST00000344626 TSHZ3Q63HK5 1081 aa19.21■□□□□ 0.67
SMARCA4-201ENST00000344626 BACH2Q9BYV9 841 aa19.21■□□□□ 0.67
SMARCA4-201ENST00000344626 CEP131Q9UPN4 1083 aa19.21■□□□□ 0.67
SMARCA4-201ENST00000344626 FAM135BQ49AJ0 1406 aa19.21■□□□□ 0.67
SMARCA4-201ENST00000344626 TNNI2P48788 182 aa19.21■□□□□ 0.67
SMARCA4-201ENST00000344626 SUPT20HQ8NEM7 779 aa19.21■□□□□ 0.67
SMARCA4-201ENST00000344626 EHMT1Q9H9B1 1298 aa19.21■□□□□ 0.67
SMARCA4-201ENST00000344626 VAT1LQ9HCJ6 419 aa19.21■□□□□ 0.67
SMARCA4-201ENST00000344626 CATIPQ7Z7H3 387 aa19.2■□□□□ 0.66
SMARCA4-201ENST00000344626 HAND2P61296 217 aa19.2■□□□□ 0.66
SMARCA4-201ENST00000344626 BIN2Q9UBW5 565 aaPredicted RBP19.2■□□□□ 0.66
SMARCA4-201ENST00000344626 CFAP45Q9UL16 551 aa19.2■□□□□ 0.66
SMARCA4-201ENST00000344626 ANKRD44Q8N8A2 993 aa19.2■□□□□ 0.66
SMARCA4-201ENST00000344626 SSBP05455 408 aaKnown RBP eCLIP19.2■□□□□ 0.66
SMARCA4-201ENST00000344626 CCDC178Q5BJE1 867 aa19.2■□□□□ 0.66
SMARCA4-201ENST00000344626 MAGEC2Q9UBF1 373 aaPredicted RBP19.2■□□□□ 0.66
SMARCA4-201ENST00000344626 H7C1D1 291 aa19.19■□□□□ 0.66
SMARCA4-201ENST00000344626 IFIT3O14879 490 aaKnown RBP19.19■□□□□ 0.66
SMARCA4-201ENST00000344626 CEBPZQ03701 1054 aaKnown RBP19.19■□□□□ 0.66
SMARCA4-201ENST00000344626 IL17REQ8NFR9 667 aa19.19■□□□□ 0.66
SMARCA4-201ENST00000344626 CNKSR1Q969H4 720 aa19.19■□□□□ 0.66
SMARCA4-201ENST00000344626 SLC9C2Q5TAH2 1124 aa19.19■□□□□ 0.66
SMARCA4-201ENST00000344626 G2E3Q7L622 706 aa19.19■□□□□ 0.66
SMARCA4-201ENST00000344626 METTL22Q9BUU2 404 aaPredicted RBP19.19■□□□□ 0.66
SMARCA4-201ENST00000344626 ME1P48163 572 aa19.19■□□□□ 0.66
SMARCA4-201ENST00000344626 STIM1Q13586 685 aa19.19■□□□□ 0.66
SMARCA4-201ENST00000344626 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.19■□□□□ 0.662e-6■■■□□ 14.7
SMARCA4-201ENST00000344626 HDAC1Q13547 482 aaPredicted RBP19.19■□□□□ 0.66
SMARCA4-201ENST00000344626 FIBPO43427 364 aa19.18■□□□□ 0.66
SMARCA4-201ENST00000344626 KRI1Q8N9T8 703 aaKnown RBP19.18■□□□□ 0.66
SMARCA4-201ENST00000344626 SH2B1Q9NRF2 756 aaPredicted RBP19.18■□□□□ 0.66
SMARCA4-201ENST00000344626 ZBTB1Q9Y2K1 713 aa19.18■□□□□ 0.66
SMARCA4-201ENST00000344626 SPATA31A6Q5VVP1 1343 aa19.18■□□□□ 0.66
SMARCA4-201ENST00000344626 USP6P35125 1406 aa19.18■□□□□ 0.66
SMARCA4-201ENST00000344626 OFD1O75665 1012 aa19.18■□□□□ 0.66
SMARCA4-201ENST00000344626 KIF5BP33176 963 aa19.18■□□□□ 0.66
SMARCA4-201ENST00000344626 CCDC70Q6NSX1 233 aa19.18■□□□□ 0.66
SMARCA4-201ENST00000344626 MFSD6Q6ZSS7 791 aa19.18■□□□□ 0.66
SMARCA4-201ENST00000344626 SCLT1Q96NL6 688 aa19.18■□□□□ 0.66
SMARCA4-201ENST00000344626 KDM5AP29375 1690 aaKnown RBP19.17■□□□□ 0.66
SMARCA4-201ENST00000344626 SPATA31E1Q6ZUB1 1445 aa19.17■□□□□ 0.66
SMARCA4-201ENST00000344626 PLCG2P16885 1265 aa19.17■□□□□ 0.66
SMARCA4-201ENST00000344626 HIBADHP31937 336 aaKnown RBP19.17■□□□□ 0.66
SMARCA4-201ENST00000344626 KIF1BO60333 1816 aa19.17■□□□□ 0.66
SMARCA4-201ENST00000344626 RPS8P62241 208 aaKnown RBP19.17■□□□□ 0.66
SMARCA4-201ENST00000344626 TRMT1LQ7Z2T5 733 aaKnown RBP19.17■□□□□ 0.66
SMARCA4-201ENST00000344626 DACH1Q9UI36 760 aa19.17■□□□□ 0.66
SMARCA4-201ENST00000344626 TAF5LO75529 589 aa19.16■□□□□ 0.66
SMARCA4-201ENST00000344626 FILIP1LQ4L180 1135 aa19.16■□□□□ 0.66
SMARCA4-201ENST00000344626 HMG20BQ9P0W2 317 aa19.16■□□□□ 0.66
SMARCA4-201ENST00000344626 TET3O43151 1660 aa19.16■□□□□ 0.66
SMARCA4-201ENST00000344626 EIF4A1P60842 406 aaKnown RBP19.16■□□□□ 0.66
SMARCA4-201ENST00000344626 BICC1Q9H694 974 aaKnown RBP19.16■□□□□ 0.66
SMARCA4-201ENST00000344626 CCDC12Q8WUD4 166 aaPredicted RBP19.15■□□□□ 0.66
SMARCA4-201ENST00000344626 VTI1AQ96AJ9 217 aa19.15■□□□□ 0.66
SMARCA4-201ENST00000344626 ATP7BP35670 1465 aa19.15■□□□□ 0.66
SMARCA4-201ENST00000344626 CT47A1Q5JQC4 288 aaPredicted RBP19.15■□□□□ 0.66
SMARCA4-201ENST00000344626 TTLL7Q6ZT98 887 aa19.15■□□□□ 0.66
SMARCA4-201ENST00000344626 MIGA1Q8NAN2 632 aa19.15■□□□□ 0.66
SMARCA4-201ENST00000344626 BMP2KLQ5H9B9 411 aa19.15■□□□□ 0.66
SMARCA4-201ENST00000344626 KAT14Q9H8E8 782 aa19.15■□□□□ 0.66
SMARCA4-201ENST00000344626 SLC4A4Q9Y6R1 1079 aa19.15■□□□□ 0.66
SMARCA4-201ENST00000344626 PLS1Q14651 629 aa19.15■□□□□ 0.66
SMARCA4-201ENST00000344626 IL27Q8NEV9 243 aa19.15■□□□□ 0.66
SMARCA4-201ENST00000344626 CHL1O00533 1208 aa19.15■□□□□ 0.66
SMARCA4-201ENST00000344626 SERPINB2P05120 415 aa19.14■□□□□ 0.66
SMARCA4-201ENST00000344626 MMP10P09238 476 aa19.14■□□□□ 0.66
SMARCA4-201ENST00000344626 ZNF594Q96JF6 807 aaPredicted RBP19.14■□□□□ 0.66
SMARCA4-201ENST00000344626 TCIRG1Q13488 830 aa19.14■□□□□ 0.65
SMARCA4-201ENST00000344626 NCOA7Q8NI08 942 aa19.14■□□□□ 0.65
SMARCA4-201ENST00000344626 GOLGA8AA7E2F4 631 aa19.14■□□□□ 0.65
SMARCA4-201ENST00000344626 GOLGA8BA8MQT2 603 aa19.14■□□□□ 0.65
SMARCA4-201ENST00000344626 HMGN5P82970 282 aaKnown RBP19.14■□□□□ 0.65
SMARCA4-201ENST00000344626 TRAF1Q13077 416 aa19.14■□□□□ 0.65
SMARCA4-201ENST00000344626 TTC22Q5TAA0 569 aa19.14■□□□□ 0.65
SMARCA4-201ENST00000344626 A0A0U1RQG5 324 aaPredicted RBP19.13■□□□□ 0.65
SMARCA4-201ENST00000344626 RTL1A6NKG5 1358 aa19.13■□□□□ 0.65
SMARCA4-201ENST00000344626 GIGYF1O75420 1035 aaPredicted RBP19.13■□□□□ 0.65
SMARCA4-201ENST00000344626 GSE1Q14687 1217 aa19.13■□□□□ 0.65
SMARCA4-201ENST00000344626 UPF3BQ9BZI7 483 aaKnown RBP19.13■□□□□ 0.65
SMARCA4-201ENST00000344626 MCM9Q9NXL9 1143 aa19.13■□□□□ 0.65
SMARCA4-201ENST00000344626 SSRP1Q08945 709 aaKnown RBP19.13■□□□□ 0.65
SMARCA4-201ENST00000344626 PIGBQ92521 554 aa19.13■□□□□ 0.65
SMARCA4-201ENST00000344626 PRPF40AO75400 957 aaKnown RBP19.13■□□□□ 0.65
SMARCA4-201ENST00000344626 DDX11Q96FC9 970 aa19.13■□□□□ 0.65
SMARCA4-201ENST00000344626 TSPY3P0CV98 308 aa19.12■□□□□ 0.65
SMARCA4-201ENST00000344626 TSPY8P0CW00 308 aa19.12■□□□□ 0.65
SMARCA4-201ENST00000344626 TIMM10P62072 90 aa19.12■□□□□ 0.65
SMARCA4-201ENST00000344626 KRT23Q9C075 422 aa19.12■□□□□ 0.65
SMARCA4-201ENST00000344626 RTN4Q9NQC3 1192 aaKnown RBP19.12■□□□□ 0.65
SMARCA4-201ENST00000344626 R3HDM1Q15032 1099 aaKnown RBP19.12■□□□□ 0.65
SMARCA4-201ENST00000344626 MPHOSPH6Q99547 160 aaKnown RBP19.12■□□□□ 0.65
SMARCA4-201ENST00000344626 ODF2Q5BJF6 829 aa19.12■□□□□ 0.65
SMARCA4-201ENST00000344626 ANKARQ7Z5J8 1434 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms