RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 PDCL3Q9H2J4 239 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 TTF1Q15361 905 aaPredicted RBP10.04□□□□□ -0.8
FGD6-201ENST00000343958 ATP2B3Q16720 1220 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 FAM173BQ6P4H8 233 aa10.04□□□□□ -0.8
FGD6-201ENST00000343958 KIF18AQ8NI77 898 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 RNF41Q9H4P4 317 aaPredicted RBP10.03□□□□□ -0.8
FGD6-201ENST00000343958 POLR3GO15318 223 aaPredicted RBP10.03□□□□□ -0.8
FGD6-201ENST00000343958 CYP7A1P22680 504 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 PAG1Q9NWQ8 432 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 ZFYVE9O95405 1425 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 CCDC196A0A1B0GTZ2 297 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 H0YHG0 523 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 RNF113AO15541 343 aaKnown RBP10.03□□□□□ -0.8
FGD6-201ENST00000343958 CCDC96Q2M329 555 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 TSPYL1Q9H0U9 437 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 MCM5P33992 734 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 CEP135Q66GS9 1140 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 RUFY3Q7L099 469 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 CENPHQ9H3R5 247 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 AFMP43652 599 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 CATIPQ7Z7H3 387 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 UQCRFS1P1P0C7P4 283 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 CCDC148Q8NFR7 591 aa10.03□□□□□ -0.8
FGD6-201ENST00000343958 UBA5Q9GZZ9 404 aa10.02□□□□□ -0.8
FGD6-201ENST00000343958 CCDC194A0A1B0GVG4 234 aa10.02□□□□□ -0.8
FGD6-201ENST00000343958 CHL1O00533 1208 aa10.02□□□□□ -0.8
FGD6-201ENST00000343958 GCP02774 474 aa10.02□□□□□ -0.8
FGD6-201ENST00000343958 SLC9C2Q5TAH2 1124 aa10.02□□□□□ -0.8
FGD6-201ENST00000343958 NUP88Q99567 741 aaPredicted RBP10.02□□□□□ -0.8
FGD6-201ENST00000343958 ZSCAN16Q9H4T2 348 aaPredicted RBP10.02□□□□□ -0.8
FGD6-201ENST00000343958 SEC63Q9UGP8 760 aaKnown RBP10.02□□□□□ -0.8
FGD6-201ENST00000343958 PTPDC1A2A3K4 754 aa10.02□□□□□ -0.81
FGD6-201ENST00000343958 ZSWIM4Q9H7M6 989 aa10.02□□□□□ -0.81
FGD6-201ENST00000343958 NDUFB9Q9Y6M9 179 aa10.02□□□□□ -0.81
FGD6-201ENST00000343958 TTC41PQ6P2S7 1318 aa10.02□□□□□ -0.81
FGD6-201ENST00000343958 DNMT1P26358 1616 aaKnown RBP10.02□□□□□ -0.81
FGD6-201ENST00000343958 CRACR2BQ8N4Y2 399 aaPredicted RBP10.02□□□□□ -0.81
FGD6-201ENST00000343958 SUCLG2Q96I99 432 aa10.02□□□□□ -0.81
FGD6-201ENST00000343958 SPATA31E1Q6ZUB1 1445 aa10.02□□□□□ -0.81
FGD6-201ENST00000343958 TSPY2A6NKD2 308 aa10.02□□□□□ -0.81
FGD6-201ENST00000343958 IL15P40933 162 aaPredicted RBP10.02□□□□□ -0.81
FGD6-201ENST00000343958 SNW1Q13573 536 aaKnown RBP10.02□□□□□ -0.81
FGD6-201ENST00000343958 NPC1L1Q9UHC9 1359 aa10.02□□□□□ -0.81
FGD6-201ENST00000343958 SYT1P21579 422 aa10.02□□□□□ -0.81
FGD6-201ENST00000343958 MRPS27Q92552 414 aaKnown RBP10.02□□□□□ -0.81
FGD6-201ENST00000343958 TEX13AQ9BXU3 409 aaPredicted RBP10.02□□□□□ -0.81
FGD6-201ENST00000343958 CCDC102BQ68D86 513 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 IP6K1Q92551 441 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 FAM227BQ96M60 508 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 CGNQ9P2M7 1197 aaKnown RBP10.01□□□□□ -0.81
FGD6-201ENST00000343958 ZBTB43O43298 467 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 KIF5CO60282 957 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 GSPT1P15170 499 aaKnown RBP10.01□□□□□ -0.81
FGD6-201ENST00000343958 PTGS1P23219 599 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 SYKP43405 635 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 KCNQ3O43525 872 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 WTAPQ15007 396 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 AEBP2Q6ZN18 517 aaPredicted RBP10.01□□□□□ -0.81
FGD6-201ENST00000343958 MAGI2Q86UL8 1455 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 TAF4BQ92750 862 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 ZBTB9Q96C00 473 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 ZKSCAN5Q9Y2L8 839 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 EIF3JO75822 258 aaKnown RBP10.01□□□□□ -0.81
FGD6-201ENST00000343958 TRERF1Q96PN7 1200 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 KAT14Q9H8E8 782 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.01□□□□□ -0.81
FGD6-201ENST00000343958 V9GYY5 206 aaPredicted RBP10.01□□□□□ -0.81
FGD6-201ENST00000343958 EIF2AK4Q9P2K8 1649 aaKnown RBP10.01□□□□□ -0.81
FGD6-201ENST00000343958 PTPRTO14522 1441 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 GADD45BO75293 160 aaPredicted RBP10.01□□□□□ -0.81
FGD6-201ENST00000343958 RRAGBQ5VZM2 374 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 MIGA1Q8NAN2 632 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 FAM200AQ8TCP9 573 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 DBNDD2Q9BQY9 259 aa10.01□□□□□ -0.81
FGD6-201ENST00000343958 PHF23Q9BUL5 403 aaPredicted RBP10.01□□□□□ -0.81
FGD6-201ENST00000343958 OTUD7BQ6GQQ9 843 aa10□□□□□ -0.81
FGD6-201ENST00000343958 LUZP1Q86V48 1076 aa10□□□□□ -0.81
FGD6-201ENST00000343958 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10□□□□□ -0.81
FGD6-201ENST00000343958 TYRO3Q06418 890 aa10□□□□□ -0.81
FGD6-201ENST00000343958 SPA17Q15506 151 aa10□□□□□ -0.81
FGD6-201ENST00000343958 SOS1Q07889 1333 aaPredicted RBP10□□□□□ -0.81
FGD6-201ENST00000343958 SLC27A2O14975 620 aa10□□□□□ -0.81
FGD6-201ENST00000343958 NBPF7P0C2Y1 421 aaPredicted RBP10□□□□□ -0.81
FGD6-201ENST00000343958 TIMM10P62072 90 aa10□□□□□ -0.81
FGD6-201ENST00000343958 FKBP15Q5T1M5 1219 aa10□□□□□ -0.81
FGD6-201ENST00000343958 ZMYM3Q14202 1370 aa10□□□□□ -0.81
FGD6-201ENST00000343958 KIF2AO00139 706 aaPredicted RBP10□□□□□ -0.81
FGD6-201ENST00000343958 NEMFO60524 1076 aa10□□□□□ -0.81
FGD6-201ENST00000343958 PRKCSHP14314 528 aaPredicted RBP10□□□□□ -0.81
FGD6-201ENST00000343958 GSDMDP57764 484 aa10□□□□□ -0.81
FGD6-201ENST00000343958 ZKSCAN3Q9BRR0 538 aa10□□□□□ -0.81
FGD6-201ENST00000343958 MTIF2P46199 727 aaKnown RBP10□□□□□ -0.81
FGD6-201ENST00000343958 ZNF594Q96JF6 807 aaPredicted RBP10□□□□□ -0.81
FGD6-201ENST00000343958 TSG101Q99816 390 aa10□□□□□ -0.81
FGD6-201ENST00000343958 C6orf229H3BNL8 230 aa9.99□□□□□ -0.81
FGD6-201ENST00000343958 SKILP12757 684 aa9.99□□□□□ -0.81
FGD6-201ENST00000343958 NBPF6Q5VWK0 638 aa9.99□□□□□ -0.81
FGD6-201ENST00000343958 ZNF397Q8NF99 534 aaPredicted RBP9.99□□□□□ -0.81
FGD6-201ENST00000343958 DHX58Q96C10 678 aa9.99□□□□□ -0.81
FGD6-201ENST00000343958 NBPF4Q96M43 638 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms