RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 INF2Q27J81 1249 aa20■□□□□ 0.79
SMAD4-201ENST00000342988 ZNF444Q8N0Y2 327 aaPredicted RBP20■□□□□ 0.79
SMAD4-201ENST00000342988 PLCD3Q8N3E9 789 aa20■□□□□ 0.79
SMAD4-201ENST00000342988 DDX19AQ9NUU7 478 aaKnown RBP20■□□□□ 0.79
SMAD4-201ENST00000342988 HSPA1LP34931 641 aa20■□□□□ 0.79
SMAD4-201ENST00000342988 SIL1Q9H173 461 aa20■□□□□ 0.79
SMAD4-201ENST00000342988 CEP126Q9P2H0 1117 aa20■□□□□ 0.79
SMAD4-201ENST00000342988 CABP4P57796 275 aa20■□□□□ 0.79
SMAD4-201ENST00000342988 WHAMMP3Q1A5X7 153 aa20■□□□□ 0.79
SMAD4-201ENST00000342988 RBM42Q9BTD8 480 aaKnown RBP20■□□□□ 0.79
SMAD4-201ENST00000342988 WDR78Q5VTH9 848 aa20■□□□□ 0.79
SMAD4-201ENST00000342988 PDE3AQ14432 1141 aa19.99■□□□□ 0.79
SMAD4-201ENST00000342988 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
SMAD4-201ENST00000342988 NAA16Q6N069 864 aaPredicted RBP19.99■□□□□ 0.79
SMAD4-201ENST00000342988 TRMT1Q9NXH9 659 aaKnown RBP19.99■□□□□ 0.79
SMAD4-201ENST00000342988 GSDMBQ8TAX9 411 aa19.99■□□□□ 0.79
SMAD4-201ENST00000342988 TRAF1Q13077 416 aa19.99■□□□□ 0.79
SMAD4-201ENST00000342988 RNF8O76064 485 aa19.99■□□□□ 0.79
SMAD4-201ENST00000342988 CTAGE15A4D2H0 777 aa19.99■□□□□ 0.79
SMAD4-201ENST00000342988 CTAGE8P0CG41 777 aa19.99■□□□□ 0.79
SMAD4-201ENST00000342988 CTAGE4Q8IX94 777 aa19.99■□□□□ 0.79
SMAD4-201ENST00000342988 STK10O94804 968 aaKnown RBP19.98■□□□□ 0.79
SMAD4-201ENST00000342988 RAB11FIP4Q86YS3 637 aa19.98■□□□□ 0.79
SMAD4-201ENST00000342988 TAF12Q16514 161 aa19.98■□□□□ 0.79
SMAD4-201ENST00000342988 SLC4A8Q2Y0W8 1093 aa19.98■□□□□ 0.79
SMAD4-201ENST00000342988 SPC25Q9HBM1 224 aa19.98■□□□□ 0.79
SMAD4-201ENST00000342988 GNG11P61952 73 aa19.98■□□□□ 0.79
SMAD4-201ENST00000342988 CCDC94Q9BW85 323 aaPredicted RBP19.98■□□□□ 0.79
SMAD4-201ENST00000342988 RASSF2P50749 326 aa19.98■□□□□ 0.79
SMAD4-201ENST00000342988 MRVI1Q9Y6F6 885 aa19.98■□□□□ 0.79
SMAD4-201ENST00000342988 BRD4O60885 1362 aaPredicted RBP19.98■□□□□ 0.79
SMAD4-201ENST00000342988 MUM1L1Q5H9M0 696 aa19.98■□□□□ 0.79
SMAD4-201ENST00000342988 PDCD7Q8N8D1 485 aaKnown RBP19.98■□□□□ 0.79
SMAD4-201ENST00000342988 STAC3Q96MF2 364 aa19.98■□□□□ 0.79
SMAD4-201ENST00000342988 TATP17735 454 aaPredicted RBP19.97■□□□□ 0.79
SMAD4-201ENST00000342988 PPP1R7Q15435 360 aa19.97■□□□□ 0.79
SMAD4-201ENST00000342988 RUFY3Q7L099 469 aa19.97■□□□□ 0.79
SMAD4-201ENST00000342988 HDGFL1Q5TGJ6 251 aa19.97■□□□□ 0.79
SMAD4-201ENST00000342988 IL27Q8NEV9 243 aa19.97■□□□□ 0.79
SMAD4-201ENST00000342988 ZHX1Q9UKY1 873 aaPredicted RBP19.97■□□□□ 0.79
SMAD4-201ENST00000342988 VAV2P52735 878 aa19.97■□□□□ 0.79
SMAD4-201ENST00000342988 MCM4P33991 863 aa19.97■□□□□ 0.79
SMAD4-201ENST00000342988 TTF1Q15361 905 aaPredicted RBP19.97■□□□□ 0.79
SMAD4-201ENST00000342988 NBPF11Q86T75 865 aa19.97■□□□□ 0.79
SMAD4-201ENST00000342988 CAPZA3Q96KX2 299 aa19.97■□□□□ 0.79
SMAD4-201ENST00000342988 RAB11FIP3O75154 756 aa19.97■□□□□ 0.79
SMAD4-201ENST00000342988 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.97■□□□□ 0.79
SMAD4-201ENST00000342988 AKR1B10O60218 316 aa19.96■□□□□ 0.79
SMAD4-201ENST00000342988 RILPL1Q5EBL4 403 aa19.96■□□□□ 0.79
SMAD4-201ENST00000342988 MCUR1Q96AQ8 359 aa19.96■□□□□ 0.79
SMAD4-201ENST00000342988 BICDL1Q6ZP65 573 aa19.96■□□□□ 0.79
SMAD4-201ENST00000342988 KRT86O43790 486 aa19.96■□□□□ 0.79
SMAD4-201ENST00000342988 EEF2P13639 858 aaKnown RBP19.96■□□□□ 0.79
SMAD4-201ENST00000342988 ANKIB1Q9P2G1 1089 aa19.96■□□□□ 0.79
SMAD4-201ENST00000342988 B4DLN1 442 aa19.96■□□□□ 0.79
SMAD4-201ENST00000342988 IDH1O75874 414 aaKnown RBP19.96■□□□□ 0.79
SMAD4-201ENST00000342988 MRPL12P52815 198 aaKnown RBP19.96■□□□□ 0.79
SMAD4-201ENST00000342988 KRT83P78385 493 aa19.96■□□□□ 0.79
SMAD4-201ENST00000342988 ITIH3Q06033 890 aa19.96■□□□□ 0.79
SMAD4-201ENST00000342988 FAM76AQ8TAV0 307 aa19.96■□□□□ 0.79
SMAD4-201ENST00000342988 UBA7P41226 1012 aa19.96■□□□□ 0.79
SMAD4-201ENST00000342988 POTEDQ86YR6 584 aa19.96■□□□□ 0.79
SMAD4-201ENST00000342988 SPG7Q9UQ90 795 aa19.96■□□□□ 0.79
SMAD4-201ENST00000342988 CHMP2AO43633 222 aa19.95■□□□□ 0.78
SMAD4-201ENST00000342988 ABTB2Q8N961 1025 aa19.95■□□□□ 0.78
SMAD4-201ENST00000342988 KCNK9Q9NPC2 374 aa19.95■□□□□ 0.78
SMAD4-201ENST00000342988 CCDC38Q502W7 563 aa19.95■□□□□ 0.78
SMAD4-201ENST00000342988 A0A1B0GUL7 405 aa19.94■□□□□ 0.78
SMAD4-201ENST00000342988 CHD1LQ86WJ1 897 aa19.94■□□□□ 0.78
SMAD4-201ENST00000342988 Q9H521 79 aa19.94■□□□□ 0.78
SMAD4-201ENST00000342988 PALM3A6NDB9 673 aaPredicted RBP19.94■□□□□ 0.78
SMAD4-201ENST00000342988 E7EVH7 732 aa19.94■□□□□ 0.78
SMAD4-201ENST00000342988 PPP1R12CQ9BZL4 782 aa19.94■□□□□ 0.78
SMAD4-201ENST00000342988 FYCO1Q9BQS8 1478 aa19.94■□□□□ 0.78
SMAD4-201ENST00000342988 ZEB2O60315 1214 aa19.94■□□□□ 0.78
SMAD4-201ENST00000342988 PLCB3Q01970 1234 aa19.94■□□□□ 0.78
SMAD4-201ENST00000342988 PPFIA1Q13136 1202 aa19.94■□□□□ 0.78
SMAD4-201ENST00000342988 MAP3K12Q12852 859 aa19.94■□□□□ 0.78
SMAD4-201ENST00000342988 BIRC2Q13490 618 aa19.94■□□□□ 0.78
SMAD4-201ENST00000342988 THEGQ9P2T0 379 aa19.94■□□□□ 0.78
SMAD4-201ENST00000342988 BMP15O95972 392 aa19.94■□□□□ 0.78
SMAD4-201ENST00000342988 RNF10Q8N5U6 811 aaKnown RBP19.94■□□□□ 0.78
SMAD4-201ENST00000342988 ATP6V0A2Q9Y487 856 aa19.94■□□□□ 0.78
SMAD4-201ENST00000342988 SYF2O95926 243 aaKnown RBP19.93■□□□□ 0.78
SMAD4-201ENST00000342988 TRIM47Q96LD4 638 aa19.93■□□□□ 0.78
SMAD4-201ENST00000342988 RASSF4Q9H2L5 321 aa19.93■□□□□ 0.78
SMAD4-201ENST00000342988 I3L4J1 428 aa19.93■□□□□ 0.78
SMAD4-201ENST00000342988 MINDY4BA8MYZ0 360 aa19.93■□□□□ 0.78
SMAD4-201ENST00000342988 CPLX3Q8WVH0 158 aa19.93■□□□□ 0.78
SMAD4-201ENST00000342988 GIGYF1O75420 1035 aaPredicted RBP19.93■□□□□ 0.78
SMAD4-201ENST00000342988 ABCF2Q9UG63 623 aa19.93■□□□□ 0.78
SMAD4-201ENST00000342988 TWISTNBQ3B726 338 aaPredicted RBP19.92■□□□□ 0.78
SMAD4-201ENST00000342988 CCDC65Q8IXS2 484 aa19.92■□□□□ 0.78
SMAD4-201ENST00000342988 TMX1Q9H3N1 280 aa19.92■□□□□ 0.78
SMAD4-201ENST00000342988 CKAP2LQ8IYA6 745 aa19.92■□□□□ 0.78
SMAD4-201ENST00000342988 CCDC26Q8TAB7 109 aa19.92■□□□□ 0.78
SMAD4-201ENST00000342988 XAB2Q9HCS7 855 aaKnown RBP19.92■□□□□ 0.78
SMAD4-201ENST00000342988 SLC8A3P57103 927 aa19.92■□□□□ 0.78
SMAD4-201ENST00000342988 ARHGEF2Q92974 986 aaKnown RBP19.92■□□□□ 0.78
SMAD4-201ENST00000342988 ATP2A3Q93084 1043 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms