RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 DDX12PQ92771 950 aa20.1■□□□□ 0.81
SYDE2-202ENST00000341460 SPATS2LQ9NUQ6 558 aaKnown RBP20.1■□□□□ 0.81
SYDE2-202ENST00000341460 ANAPC15P60006 121 aa20.1■□□□□ 0.81
SYDE2-202ENST00000341460 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.1■□□□□ 0.81
SYDE2-202ENST00000341460 IFIT1P09914 478 aaKnown RBP20.1■□□□□ 0.81
SYDE2-202ENST00000341460 SETDB1Q15047 1291 aa20.1■□□□□ 0.81
SYDE2-202ENST00000341460 CAVIN4Q5BKX8 364 aa20.1■□□□□ 0.81
SYDE2-202ENST00000341460 ZNF853P0CG23 659 aa20.1■□□□□ 0.81
SYDE2-202ENST00000341460 MAP3K9P80192 1104 aa20.1■□□□□ 0.81
SYDE2-202ENST00000341460 WAPLQ7Z5K2 1190 aa20.1■□□□□ 0.81
SYDE2-202ENST00000341460 THUMPD2Q9BTF0 503 aaKnown RBP20.1■□□□□ 0.81
SYDE2-202ENST00000341460 DHX29Q7Z478 1369 aaKnown RBP20.09■□□□□ 0.81
SYDE2-202ENST00000341460 PPP1R12BO60237 982 aaPredicted RBP20.09■□□□□ 0.81
SYDE2-202ENST00000341460 CERS3Q8IU89 383 aa20.09■□□□□ 0.81
SYDE2-202ENST00000341460 TSG101Q99816 390 aa20.09■□□□□ 0.81
SYDE2-202ENST00000341460 EPRSP07814 1512 aaKnown RBP20.09■□□□□ 0.81
SYDE2-202ENST00000341460 USP5P45974 858 aa20.09■□□□□ 0.81
SYDE2-202ENST00000341460 EVCP57679 992 aa20.09■□□□□ 0.81
SYDE2-202ENST00000341460 ZBTB16Q05516 673 aa20.09■□□□□ 0.81
SYDE2-202ENST00000341460 KIAA0753Q2KHM9 967 aa20.09■□□□□ 0.81
SYDE2-202ENST00000341460 SELENOSQ9BQE4 189 aa20.09■□□□□ 0.81
SYDE2-202ENST00000341460 TFIP11Q9UBB9 837 aaKnown RBP20.09■□□□□ 0.81
SYDE2-202ENST00000341460 PTCD1O75127 700 aaKnown RBP20.08■□□□□ 0.81
SYDE2-202ENST00000341460 CCDC96Q2M329 555 aa20.08■□□□□ 0.81
SYDE2-202ENST00000341460 SH2D4BQ5SQS7 431 aa20.08■□□□□ 0.81
SYDE2-202ENST00000341460 PRPF4BQ13523 1007 aaKnown RBP20.08■□□□□ 0.8
SYDE2-202ENST00000341460 MICAL1Q8TDZ2 1067 aa20.08■□□□□ 0.8
SYDE2-202ENST00000341460 STMN2Q93045 179 aa20.08■□□□□ 0.8
SYDE2-202ENST00000341460 MYD88Q99836 296 aa20.08■□□□□ 0.8
SYDE2-202ENST00000341460 SYT1P21579 422 aa20.08■□□□□ 0.8
SYDE2-202ENST00000341460 PPP2R3AQ06190 1150 aa20.08■□□□□ 0.8
SYDE2-202ENST00000341460 PIBF1Q8WXW3 757 aa20.08■□□□□ 0.8
SYDE2-202ENST00000341460 CCDC172P0C7W6 258 aa20.07■□□□□ 0.8
SYDE2-202ENST00000341460 GBP1P32455 592 aa20.07■□□□□ 0.8
SYDE2-202ENST00000341460 RHOXF2BP0C7M4 288 aa20.07■□□□□ 0.8
SYDE2-202ENST00000341460 SH3BGRP55822 239 aaPredicted RBP20.07■□□□□ 0.8
SYDE2-202ENST00000341460 CCDC38Q502W7 563 aa20.07■□□□□ 0.8
SYDE2-202ENST00000341460 C20orf194Q5TEA3 1177 aa20.07■□□□□ 0.8
SYDE2-202ENST00000341460 SEPT14Q6ZU15 432 aa20.07■□□□□ 0.8
SYDE2-202ENST00000341460 C8orf76Q96K31 380 aa20.07■□□□□ 0.8
SYDE2-202ENST00000341460 RHOXF2Q9BQY4 288 aa20.07■□□□□ 0.8
SYDE2-202ENST00000341460 PRPF40BQ6NWY9 871 aaKnown RBP20.07■□□□□ 0.8
SYDE2-202ENST00000341460 PPP1R14CQ8TAE6 165 aa20.07■□□□□ 0.8
SYDE2-202ENST00000341460 TRIM7Q9C029 511 aa20.07■□□□□ 0.8
SYDE2-202ENST00000341460 GJB2P29033 226 aa20.06■□□□□ 0.8
SYDE2-202ENST00000341460 RARSP54136 660 aaKnown RBP20.06■□□□□ 0.8
SYDE2-202ENST00000341460 SSH1Q8WYL5 1049 aa20.06■□□□□ 0.8
SYDE2-202ENST00000341460 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.06■□□□□ 0.81e-6■■■■□ 26.5
SYDE2-202ENST00000341460 CYLC1P35663 651 aaPredicted RBP20.06■□□□□ 0.8
SYDE2-202ENST00000341460 IFI16Q16666 785 aaKnown RBP20.06■□□□□ 0.8
SYDE2-202ENST00000341460 SEC63Q9UGP8 760 aaKnown RBP20.06■□□□□ 0.8
SYDE2-202ENST00000341460 ZPR1O75312 459 aa20.06■□□□□ 0.8
SYDE2-202ENST00000341460 CDK13Q14004 1512 aaKnown RBP20.06■□□□□ 0.8
SYDE2-202ENST00000341460 NOP2P46087 812 aaKnown RBP20.06■□□□□ 0.8
SYDE2-202ENST00000341460 PUF60Q9UHX1 559 aaKnown RBP20.06■□□□□ 0.8
SYDE2-202ENST00000341460 CCDC196A0A1B0GTZ2 297 aa20.05■□□□□ 0.8
SYDE2-202ENST00000341460 BOLA2Q9H3K6 86 aa20.05■□□□□ 0.8
SYDE2-202ENST00000341460 CWC25Q9NXE8 425 aaPredicted RBP20.05■□□□□ 0.8
SYDE2-202ENST00000341460 CCDC77Q9BR77 488 aa20.05■□□□□ 0.8
SYDE2-202ENST00000341460 POLR3DP05423 398 aaPredicted RBP20.05■□□□□ 0.8
SYDE2-202ENST00000341460 FERP16591 822 aa20.05■□□□□ 0.8
SYDE2-202ENST00000341460 VAV2P52735 878 aa20.05■□□□□ 0.8
SYDE2-202ENST00000341460 CEP128Q6ZU80 1094 aa20.05■□□□□ 0.8
SYDE2-202ENST00000341460 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.05■□□□□ 0.8
SYDE2-202ENST00000341460 MACROD2A1Z1Q3 448 aa20.04■□□□□ 0.8
SYDE2-202ENST00000341460 MTIF2P46199 727 aaKnown RBP20.04■□□□□ 0.8
SYDE2-202ENST00000341460 CFAP58Q5T655 872 aa20.04■□□□□ 0.8
SYDE2-202ENST00000341460 PHAXQ9H814 394 aaKnown RBP20.04■□□□□ 0.8
SYDE2-202ENST00000341460 SMARCA5O60264 1052 aaPredicted RBP20.04■□□□□ 0.8
SYDE2-202ENST00000341460 ZNF365Q70YC5 407 aa20.04■□□□□ 0.8
SYDE2-202ENST00000341460 PUS7Q96PZ0 661 aaKnown RBP20.04■□□□□ 0.8
SYDE2-202ENST00000341460 NAPBQ9H115 298 aa20.04■□□□□ 0.8
SYDE2-202ENST00000341460 ABCA10Q8WWZ4 1543 aa20.04■□□□□ 0.8
SYDE2-202ENST00000341460 IFIT5Q13325 482 aaKnown RBP20.04■□□□□ 0.8
SYDE2-202ENST00000341460 MKNK2Q9HBH9 465 aa20.04■□□□□ 0.8
SYDE2-202ENST00000341460 IQGAP2Q13576 1575 aa20.04■□□□□ 0.8
SYDE2-202ENST00000341460 MAGI1Q96QZ7 1491 aaPredicted RBP20.04■□□□□ 0.8
SYDE2-202ENST00000341460 USP48Q86UV5 1035 aa20.04■□□□□ 0.8
SYDE2-202ENST00000341460 NME9Q86XW9 330 aa20.04■□□□□ 0.8
SYDE2-202ENST00000341460 RPUSD2Q8IZ73 545 aaKnown RBP20.04■□□□□ 0.8
SYDE2-202ENST00000341460 MINDY4BA8MYZ0 360 aa20.03■□□□□ 0.8
SYDE2-202ENST00000341460 ZSCAN22P10073 491 aaPredicted RBP20.03■□□□□ 0.8
SYDE2-202ENST00000341460 VCX3BQ9H321 246 aa20.03■□□□□ 0.8
SYDE2-202ENST00000341460 ANAPC4Q9UJX5 808 aa20.03■□□□□ 0.8
SYDE2-202ENST00000341460 IKBKGQ9Y6K9 419 aa20.03■□□□□ 0.8
SYDE2-202ENST00000341460 ARHGEF11O15085 1522 aa20.03■□□□□ 0.8
SYDE2-202ENST00000341460 AKR1B10O60218 316 aa20.03■□□□□ 0.8
SYDE2-202ENST00000341460 MAP3K12Q12852 859 aa20.03■□□□□ 0.8
SYDE2-202ENST00000341460 OAS2P29728 719 aaKnown RBP20.03■□□□□ 0.8
SYDE2-202ENST00000341460 N4BP3O15049 544 aa20.02■□□□□ 0.8
SYDE2-202ENST00000341460 GBP7Q8N8V2 638 aaPredicted RBP20.02■□□□□ 0.8
SYDE2-202ENST00000341460 RAB3IL1Q8TBN0 382 aa20.02■□□□□ 0.8
SYDE2-202ENST00000341460 NKTRP30414 1462 aaKnown RBP20.02■□□□□ 0.8
SYDE2-202ENST00000341460 RLBP1P12271 317 aa20.02■□□□□ 0.8
SYDE2-202ENST00000341460 RAB3GAP1Q15042 981 aa20.02■□□□□ 0.8
SYDE2-202ENST00000341460 ELF2Q15723 593 aa20.02■□□□□ 0.8
SYDE2-202ENST00000341460 ZBTB12Q9Y330 459 aaPredicted RBP20.02■□□□□ 0.8
SYDE2-202ENST00000341460 TNIP1Q15025 636 aa20.02■□□□□ 0.8
SYDE2-202ENST00000341460 INTS8Q75QN2 995 aaKnown RBP20.02■□□□□ 0.8
SYDE2-202ENST00000341460 ZBTB9Q96C00 473 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms