RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 SERPINB2P05120 415 aa16.58■□□□□ 0.24
GTF2F2-201ENST00000340473 SLC10A5Q5PT55 438 aa16.58■□□□□ 0.24
GTF2F2-201ENST00000340473 C3orf67Q6ZVT6 689 aa16.58■□□□□ 0.24
GTF2F2-201ENST00000340473 PRR5LQ6MZQ0 368 aa16.57■□□□□ 0.24
GTF2F2-201ENST00000340473 CNBD1Q8NA66 436 aa16.57■□□□□ 0.24
GTF2F2-201ENST00000340473 GREM2Q9H772 168 aa16.57■□□□□ 0.24
GTF2F2-201ENST00000340473 CASZ1Q86V15 1759 aa16.57■□□□□ 0.24
GTF2F2-201ENST00000340473 APBB1O00213 710 aa16.57■□□□□ 0.24
GTF2F2-201ENST00000340473 HSP90B1P14625 803 aaKnown RBP16.57■□□□□ 0.24
GTF2F2-201ENST00000340473 NUCB1Q02818 461 aa16.57■□□□□ 0.24
GTF2F2-201ENST00000340473 PTPN12Q05209 780 aaKnown RBP16.57■□□□□ 0.24
GTF2F2-201ENST00000340473 NOP58Q9Y2X3 529 aaKnown RBP16.57■□□□□ 0.24
GTF2F2-201ENST00000340473 NPHP1O15259 732 aa16.56■□□□□ 0.24
GTF2F2-201ENST00000340473 MMP10P09238 476 aa16.56■□□□□ 0.24
GTF2F2-201ENST00000340473 ANKRD45Q5TZF3 282 aa16.56■□□□□ 0.24
GTF2F2-201ENST00000340473 TNRC6CQ9HCJ0 1690 aaKnown RBP16.56■□□□□ 0.24
GTF2F2-201ENST00000340473 SIL1Q9H173 461 aa16.55■□□□□ 0.24
GTF2F2-201ENST00000340473 COPRSQ9NQ92 184 aa16.55■□□□□ 0.24
GTF2F2-201ENST00000340473 ZNF594Q96JF6 807 aaPredicted RBP16.55■□□□□ 0.24
GTF2F2-201ENST00000340473 NRXN2Q9P2S2 1712 aa16.55■□□□□ 0.24
GTF2F2-201ENST00000340473 ITGA6P23229 1130 aa16.54■□□□□ 0.24
GTF2F2-201ENST00000340473 IFIT5Q13325 482 aaKnown RBP16.54■□□□□ 0.24
GTF2F2-201ENST00000340473 CCDC57Q2TAC2 916 aa16.54■□□□□ 0.24
GTF2F2-201ENST00000340473 CHD1LQ86WJ1 897 aa16.54■□□□□ 0.24
GTF2F2-201ENST00000340473 SMARCA5O60264 1052 aaPredicted RBP16.54■□□□□ 0.24
GTF2F2-201ENST00000340473 LNPKQ9C0E8 428 aa16.54■□□□□ 0.24
GTF2F2-201ENST00000340473 SF3B3Q15393 1217 aaKnown RBP16.53■□□□□ 0.24
GTF2F2-201ENST00000340473 CCDC152Q4G0S7 254 aa16.53■□□□□ 0.24
GTF2F2-201ENST00000340473 PARP3Q9Y6F1 533 aa16.53■□□□□ 0.24
GTF2F2-201ENST00000340473 ST5P78524 1137 aa16.53■□□□□ 0.24
GTF2F2-201ENST00000340473 R3HDM1Q15032 1099 aaKnown RBP16.53■□□□□ 0.24
GTF2F2-201ENST00000340473 NLRP3Q96P20 1036 aa16.53■□□□□ 0.24
GTF2F2-201ENST00000340473 SEC31BQ9NQW1 1179 aa16.53■□□□□ 0.24
GTF2F2-201ENST00000340473 ANKRD18BA2A2Z9 1011 aa16.52■□□□□ 0.24
GTF2F2-201ENST00000340473 RAB11FIP3O75154 756 aa16.52■□□□□ 0.24
GTF2F2-201ENST00000340473 G3BP1Q13283 466 aaKnown RBP eCLIP16.52■□□□□ 0.24
GTF2F2-201ENST00000340473 OS9Q13438 667 aaPredicted RBP16.52■□□□□ 0.24
GTF2F2-201ENST00000340473 HSP90AB4PQ58FF6 505 aa16.52■□□□□ 0.24
GTF2F2-201ENST00000340473 RTL9Q8NET4 1388 aa16.52■□□□□ 0.24
GTF2F2-201ENST00000340473 RIC1Q4ADV7 1423 aa16.52■□□□□ 0.24
GTF2F2-201ENST00000340473 COL4A1P02462 1669 aa16.52■□□□□ 0.23
GTF2F2-201ENST00000340473 PDE4AP27815 886 aa16.51■□□□□ 0.23
GTF2F2-201ENST00000340473 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
GTF2F2-201ENST00000340473 SLC16A10Q8TF71 515 aa16.51■□□□□ 0.23
GTF2F2-201ENST00000340473 LRRCC1Q9C099 1032 aa16.51■□□□□ 0.23
GTF2F2-201ENST00000340473 BCL11AQ9H165 835 aa16.51■□□□□ 0.23
GTF2F2-201ENST00000340473 SASH1O94885 1247 aa16.51■□□□□ 0.23
GTF2F2-201ENST00000340473 PUS3Q9BZE2 481 aaKnown RBP16.51■□□□□ 0.23
GTF2F2-201ENST00000340473 RGS3P49796 1198 aa16.5■□□□□ 0.23
GTF2F2-201ENST00000340473 LRRC24Q50LG9 513 aa16.5■□□□□ 0.23
GTF2F2-201ENST00000340473 TAF7LQ5H9L4 462 aa16.5■□□□□ 0.23
GTF2F2-201ENST00000340473 ATG9AQ7Z3C6 839 aa16.5■□□□□ 0.23
GTF2F2-201ENST00000340473 KIF1BPQ96EK5 621 aa16.5■□□□□ 0.23
GTF2F2-201ENST00000340473 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
GTF2F2-201ENST00000340473 ANKRD31Q8N7Z5 1873 aa16.5■□□□□ 0.23
GTF2F2-201ENST00000340473 IL1RAPL2Q9NP60 686 aa16.5■□□□□ 0.23
GTF2F2-201ENST00000340473 LRP5O75197 1615 aa16.5■□□□□ 0.23
GTF2F2-201ENST00000340473 EYA2O00167 538 aa16.49■□□□□ 0.23
GTF2F2-201ENST00000340473 ERC1Q8IUD2 1116 aa16.49■□□□□ 0.23
GTF2F2-201ENST00000340473 C16orf71Q8IYS4 520 aaPredicted RBP16.49■□□□□ 0.23
GTF2F2-201ENST00000340473 TAF1P21675 1872 aa16.49■□□□□ 0.23
GTF2F2-201ENST00000340473 PSDA5PKW4 1024 aaPredicted RBP16.49■□□□□ 0.23
GTF2F2-201ENST00000340473 ZBTB7AO95365 584 aa16.49■□□□□ 0.23
GTF2F2-201ENST00000340473 ZBTB47Q9UFB7 747 aaPredicted RBP16.49■□□□□ 0.23
GTF2F2-201ENST00000340473 CIAO1O76071 339 aa16.48■□□□□ 0.23
GTF2F2-201ENST00000340473 SPEF2Q9C093 1822 aa16.48■□□□□ 0.23
GTF2F2-201ENST00000340473 LDHAL6AQ6ZMR3 332 aa16.47■□□□□ 0.23
GTF2F2-201ENST00000340473 OTUD7AQ8TE49 926 aaPredicted RBP16.47■□□□□ 0.23
GTF2F2-201ENST00000340473 IL15P40933 162 aaPredicted RBP16.47■□□□□ 0.23
GTF2F2-201ENST00000340473 TFCP2Q12800 502 aa16.47■□□□□ 0.23
GTF2F2-201ENST00000340473 CRY2Q49AN0 593 aa16.47■□□□□ 0.23
GTF2F2-201ENST00000340473 BRIP1Q9BX63 1249 aa16.47■□□□□ 0.23
GTF2F2-201ENST00000340473 FBXO3Q9UK99 471 aa16.47■□□□□ 0.23
GTF2F2-201ENST00000340473 KLRG2A4D1S0 409 aaPredicted RBP16.46■□□□□ 0.23
GTF2F2-201ENST00000340473 CELF1Q92879 486 aaKnown RBP16.46■□□□□ 0.23
GTF2F2-201ENST00000340473 CDC5LQ99459 802 aaKnown RBP16.46■□□□□ 0.23
GTF2F2-201ENST00000340473 RIPOR2Q9Y4F9 1068 aa16.46■□□□□ 0.23
GTF2F2-201ENST00000340473 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
GTF2F2-201ENST00000340473 DDX46Q7L014 1031 aaKnown RBP16.45■□□□□ 0.22
GTF2F2-201ENST00000340473 ANKRD18AQ8IVF6 992 aa16.45■□□□□ 0.22
GTF2F2-201ENST00000340473 MPHOSPH8Q99549 860 aa16.45■□□□□ 0.22
GTF2F2-201ENST00000340473 MTFR1LQ9H019 292 aa16.45■□□□□ 0.22
GTF2F2-201ENST00000340473 CNNM1Q9NRU3 951 aa16.45■□□□□ 0.22
GTF2F2-201ENST00000340473 ATF5Q9Y2D1 282 aaPredicted RBP16.45■□□□□ 0.22
GTF2F2-201ENST00000340473 PLEKHM2Q8IWE5 1019 aa16.44■□□□□ 0.22
GTF2F2-201ENST00000340473 CLASRPQ8N2M8 674 aaKnown RBP16.44■□□□□ 0.22
GTF2F2-201ENST00000340473 RPGRQ92834 1020 aaKnown RBP16.44■□□□□ 0.22
GTF2F2-201ENST00000340473 COL11A2P13942 1736 aaPredicted RBP16.44■□□□□ 0.22
GTF2F2-201ENST00000340473 EAF2Q96CJ1 260 aaPredicted RBP16.43■□□□□ 0.22
GTF2F2-201ENST00000340473 SALL3Q9BXA9 1300 aa16.43■□□□□ 0.22
GTF2F2-201ENST00000340473 PDE6BP35913 854 aa16.43■□□□□ 0.22
GTF2F2-201ENST00000340473 RPS8P62241 208 aaKnown RBP16.43■□□□□ 0.22
GTF2F2-201ENST00000340473 AACSQ86V21 672 aa16.43■□□□□ 0.22
GTF2F2-201ENST00000340473 GRAPQ13588 217 aa16.42■□□□□ 0.22
GTF2F2-201ENST00000340473 TNNI3KQ59H18 835 aa16.42■□□□□ 0.22
GTF2F2-201ENST00000340473 METTL24Q5JXM2 366 aa16.42■□□□□ 0.22
GTF2F2-201ENST00000340473 VGLL2Q8N8G2 317 aa16.42■□□□□ 0.22
GTF2F2-201ENST00000340473 GRAPLQ8TC17 118 aaPredicted RBP16.42■□□□□ 0.22
GTF2F2-201ENST00000340473 RBM17Q96I25 401 aaKnown RBP16.42■□□□□ 0.22
GTF2F2-201ENST00000340473 BSDC1Q9NW68 430 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms