RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 GRAPQ13588 217 aa14.37□□□□□ -0.11
SLC28A1-202ENST00000338602 MRPL50Q8N5N7 158 aaKnown RBP14.37□□□□□ -0.11
SLC28A1-202ENST00000338602 GRAPLQ8TC17 118 aaPredicted RBP14.37□□□□□ -0.11
SLC28A1-202ENST00000338602 SSH1Q8WYL5 1049 aa14.37□□□□□ -0.11
SLC28A1-202ENST00000338602 SMC4Q9NTJ3 1288 aa14.37□□□□□ -0.11
SLC28A1-202ENST00000338602 KIF3CO14782 793 aa14.36□□□□□ -0.11
SLC28A1-202ENST00000338602 GCKRQ14397 625 aa14.36□□□□□ -0.11
SLC28A1-202ENST00000338602 SLC4A10Q6U841 1118 aa14.36□□□□□ -0.11
SLC28A1-202ENST00000338602 ATP6V0A2Q9Y487 856 aa14.36□□□□□ -0.11
SLC28A1-202ENST00000338602 CACNA1SQ13698 1873 aa14.36□□□□□ -0.11
SLC28A1-202ENST00000338602 F6X3S4 739 aa14.35□□□□□ -0.11
SLC28A1-202ENST00000338602 H7C1W4 665 aa14.35□□□□□ -0.11
SLC28A1-202ENST00000338602 UBE3BQ7Z3V4 1068 aa14.35□□□□□ -0.11
SLC28A1-202ENST00000338602 SP8Q8IXZ3 490 aa14.35□□□□□ -0.11
SLC28A1-202ENST00000338602 JARID2Q92833 1246 aaPredicted RBP14.35□□□□□ -0.11
SLC28A1-202ENST00000338602 KDM2BQ8NHM5 1336 aa14.35□□□□□ -0.11
SLC28A1-202ENST00000338602 ALDH1L1O75891 902 aa14.34□□□□□ -0.11
SLC28A1-202ENST00000338602 BEND3Q5T5X7 828 aa14.34□□□□□ -0.11
SLC28A1-202ENST00000338602 SUPT20HQ8NEM7 779 aa14.34□□□□□ -0.11
SLC28A1-202ENST00000338602 PSMD1Q99460 953 aa14.34□□□□□ -0.11
SLC28A1-202ENST00000338602 SRCIN1Q9C0H9 1055 aa14.34□□□□□ -0.11
SLC28A1-202ENST00000338602 ZBED9Q6R2W3 1325 aa14.34□□□□□ -0.11
SLC28A1-202ENST00000338602 RPS8P62241 208 aaKnown RBP14.34□□□□□ -0.11
SLC28A1-202ENST00000338602 DPY19L2Q6NUT2 758 aa14.34□□□□□ -0.11
SLC28A1-202ENST00000338602 BCL2L13Q9BXK5 485 aa14.34□□□□□ -0.11
SLC28A1-202ENST00000338602 C9orf78Q9NZ63 289 aaPredicted RBP14.34□□□□□ -0.11
SLC28A1-202ENST00000338602 CTSWP56202 376 aa14.33□□□□□ -0.12
SLC28A1-202ENST00000338602 OLFM4Q6UX06 510 aa14.33□□□□□ -0.12
SLC28A1-202ENST00000338602 DPP8Q6V1X1 898 aaPredicted RBP14.33□□□□□ -0.12
SLC28A1-202ENST00000338602 MPNDQ8N594 471 aa14.33□□□□□ -0.12
SLC28A1-202ENST00000338602 CDC5LQ99459 802 aaKnown RBP14.33□□□□□ -0.12
SLC28A1-202ENST00000338602 ZNF277Q9NRM2 450 aaPredicted RBP14.33□□□□□ -0.12
SLC28A1-202ENST00000338602 FER1L6Q2WGJ9 1857 aa14.33□□□□□ -0.12
SLC28A1-202ENST00000338602 DDX60Q8IY21 1712 aaKnown RBP14.32□□□□□ -0.12
SLC28A1-202ENST00000338602 IARSP41252 1262 aaKnown RBP14.32□□□□□ -0.12
SLC28A1-202ENST00000338602 JMYQ8N9B5 988 aa14.32□□□□□ -0.12
SLC28A1-202ENST00000338602 JDP2Q8WYK2 163 aa14.32□□□□□ -0.12
SLC28A1-202ENST00000338602 KLRG1Q96E93 195 aa14.32□□□□□ -0.12
SLC28A1-202ENST00000338602 PLA2G12BQ9BX93 195 aa14.32□□□□□ -0.12
SLC28A1-202ENST00000338602 API5Q9BZZ5 524 aaKnown RBP14.32□□□□□ -0.12
SLC28A1-202ENST00000338602 VPS33BQ9H267 617 aa14.32□□□□□ -0.12
SLC28A1-202ENST00000338602 PCDH10Q9P2E7 1040 aa14.32□□□□□ -0.12
SLC28A1-202ENST00000338602 SBF1O95248 1867 aa14.31□□□□□ -0.12
SLC28A1-202ENST00000338602 GRM8O00222 908 aa14.31□□□□□ -0.12
SLC28A1-202ENST00000338602 IPO8O15397 1037 aaKnown RBP14.31□□□□□ -0.12
SLC28A1-202ENST00000338602 TOMM70O94826 608 aa14.31□□□□□ -0.12
SLC28A1-202ENST00000338602 RARSP54136 660 aaKnown RBP14.31□□□□□ -0.12
SLC28A1-202ENST00000338602 BRPF1P55201 1214 aaPredicted RBP14.31□□□□□ -0.12
SLC28A1-202ENST00000338602 ANKRD18AQ8IVF6 992 aa14.31□□□□□ -0.12
SLC28A1-202ENST00000338602 TTLL11Q8NHH1 800 aa14.31□□□□□ -0.12
SLC28A1-202ENST00000338602 CELF1Q92879 486 aaKnown RBP14.31□□□□□ -0.12
SLC28A1-202ENST00000338602 CCDC85AQ96PX6 553 aaPredicted RBP14.31□□□□□ -0.12
SLC28A1-202ENST00000338602 LAMB2P55268 1798 aa14.31□□□□□ -0.12
SLC28A1-202ENST00000338602 KIF16BQ96L93 1317 aa14.3□□□□□ -0.12
SLC28A1-202ENST00000338602 GLTPD2A6NH11 291 aa14.3□□□□□ -0.12
SLC28A1-202ENST00000338602 LARGE2Q8N3Y3 721 aa14.3□□□□□ -0.12
SLC28A1-202ENST00000338602 NOB1Q9ULX3 412 aaKnown RBP14.3□□□□□ -0.12
SLC28A1-202ENST00000338602 RTL9Q8NET4 1388 aa14.29□□□□□ -0.12
SLC28A1-202ENST00000338602 IGHMBP2P38935 993 aaKnown RBP14.29□□□□□ -0.12
SLC28A1-202ENST00000338602 CCT4P50991 539 aaKnown RBP14.29□□□□□ -0.12
SLC28A1-202ENST00000338602 C16orf71Q8IYS4 520 aaPredicted RBP14.29□□□□□ -0.12
SLC28A1-202ENST00000338602 SEC31BQ9NQW1 1179 aa14.29□□□□□ -0.12
SLC28A1-202ENST00000338602 NSFL1CQ9UNZ2 370 aaKnown RBP14.29□□□□□ -0.12
SLC28A1-202ENST00000338602 PCNTO95613 3336 aa14.28□□□□□ -0.12
SLC28A1-202ENST00000338602 PPIP5K2O43314 1243 aa14.28□□□□□ -0.12
SLC28A1-202ENST00000338602 CASP7P55210 303 aa14.28□□□□□ -0.12
SLC28A1-202ENST00000338602 NIM1KQ8IY84 436 aa14.28□□□□□ -0.12
SLC28A1-202ENST00000338602 ARHGAP45Q92619 1136 aa14.28□□□□□ -0.12
SLC28A1-202ENST00000338602 RTFDC1Q9BY42 306 aaPredicted RBP14.28□□□□□ -0.12
SLC28A1-202ENST00000338602 GREM2Q9H772 168 aa14.28□□□□□ -0.12
SLC28A1-202ENST00000338602 CHMP3Q9Y3E7 222 aa14.28□□□□□ -0.12
SLC28A1-202ENST00000338602 CCDC88AQ3V6T2 1871 aa14.28□□□□□ -0.12
SLC28A1-202ENST00000338602 ANKRD18BA2A2Z9 1011 aa14.27□□□□□ -0.12
SLC28A1-202ENST00000338602 CSF1RP07333 972 aa14.27□□□□□ -0.12
SLC28A1-202ENST00000338602 EIF6P56537 245 aaKnown RBP14.27□□□□□ -0.12
SLC28A1-202ENST00000338602 EYA3Q99504 573 aa14.27□□□□□ -0.12
SLC28A1-202ENST00000338602 ANKIB1Q9P2G1 1089 aa14.27□□□□□ -0.12
SLC28A1-202ENST00000338602 HDAC5Q9UQL6 1122 aa14.27□□□□□ -0.12
SLC28A1-202ENST00000338602 SNED1Q8TER0 1413 aa14.26□□□□□ -0.13
SLC28A1-202ENST00000338602 C6orf229H3BNL8 230 aa14.26□□□□□ -0.13
SLC28A1-202ENST00000338602 ITGA6P23229 1130 aa14.26□□□□□ -0.13
SLC28A1-202ENST00000338602 IFIT5Q13325 482 aaKnown RBP14.26□□□□□ -0.13
SLC28A1-202ENST00000338602 CCDC57Q2TAC2 916 aa14.26□□□□□ -0.13
SLC28A1-202ENST00000338602 MPHOSPH8Q99549 860 aa14.26□□□□□ -0.13
SLC28A1-202ENST00000338602 RRAGCQ9HB90 399 aa14.26□□□□□ -0.13
SLC28A1-202ENST00000338602 BSDC1Q9NW68 430 aaPredicted RBP14.26□□□□□ -0.13
SLC28A1-202ENST00000338602 DICER1Q9UPY3 1922 aaKnown RBP14.26□□□□□ -0.13
SLC28A1-202ENST00000338602 VEGFAP15692 232 aaPredicted RBP14.25□□□□□ -0.13
SLC28A1-202ENST00000338602 AOC3Q16853 763 aa14.25□□□□□ -0.13
SLC28A1-202ENST00000338602 WASHC4Q2M389 1173 aa14.25□□□□□ -0.13
SLC28A1-202ENST00000338602 TAF7LQ5H9L4 462 aa14.25□□□□□ -0.13
SLC28A1-202ENST00000338602 LMBR1LQ6UX01 489 aa14.25□□□□□ -0.13
SLC28A1-202ENST00000338602 NMRK2Q9NPI5 230 aa14.25□□□□□ -0.13
SLC28A1-202ENST00000338602 GGA1Q9UJY5 639 aa14.25□□□□□ -0.13
SLC28A1-202ENST00000338602 G3V3G9 751 aa14.24□□□□□ -0.13
SLC28A1-202ENST00000338602 FZD9O00144 591 aa14.24□□□□□ -0.13
SLC28A1-202ENST00000338602 GPSM2P81274 684 aa14.24□□□□□ -0.13
SLC28A1-202ENST00000338602 HTRA3P83110 453 aa14.24□□□□□ -0.13
SLC28A1-202ENST00000338602 FOXO4P98177 505 aa14.24□□□□□ -0.13
SLC28A1-202ENST00000338602 KIAA2012Q0VF49 1180 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms