RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 NR1I2O75469 434 aa13.98□□□□□ -0.17
RBM39-202ENST00000338163 CSB-PGBD3P0DP91 1061 aa13.98□□□□□ -0.17
RBM39-202ENST00000338163 CEBPZQ03701 1054 aaKnown RBP13.98□□□□□ -0.17
RBM39-202ENST00000338163 FILIP1Q7Z7B0 1213 aa13.98□□□□□ -0.17
RBM39-202ENST00000338163 USP27XA6NNY8 438 aa13.97□□□□□ -0.17
RBM39-202ENST00000338163 NBPF7P0C2Y1 421 aaPredicted RBP13.97□□□□□ -0.17
RBM39-202ENST00000338163 COL9A3Q14050 684 aaPredicted RBP13.97□□□□□ -0.17
RBM39-202ENST00000338163 KIF18AQ8NI77 898 aa13.97□□□□□ -0.17
RBM39-202ENST00000338163 FBXW7Q969H0 707 aa13.97□□□□□ -0.17
RBM39-202ENST00000338163 ZNF215Q9UL58 517 aaPredicted RBP13.97□□□□□ -0.17
RBM39-202ENST00000338163 HDGFL1Q5TGJ6 251 aa13.97□□□□□ -0.17
RBM39-202ENST00000338163 EYA1Q99502 592 aa13.97□□□□□ -0.17
RBM39-202ENST00000338163 STRN4Q9NRL3 753 aa13.97□□□□□ -0.17
RBM39-202ENST00000338163 GABPB1Q06547 395 aaPredicted RBP13.96□□□□□ -0.17
RBM39-202ENST00000338163 USP54Q70EL1 1684 aa13.96□□□□□ -0.17
RBM39-202ENST00000338163 CDK11BP21127 795 aaKnown RBP13.96□□□□□ -0.17
RBM39-202ENST00000338163 MAPK8IP2Q13387 824 aaPredicted RBP13.96□□□□□ -0.17
RBM39-202ENST00000338163 LARP1Q6PKG0 1096 aaKnown RBP13.96□□□□□ -0.17
RBM39-202ENST00000338163 PLA2G4DQ86XP0 818 aa13.96□□□□□ -0.17
RBM39-202ENST00000338163 KRT222Q8N1A0 295 aa13.96□□□□□ -0.17
RBM39-202ENST00000338163 SCAND2PQ9GZW5 306 aaPredicted RBP13.96□□□□□ -0.17
RBM39-202ENST00000338163 ZSWIM6Q9HCJ5 1215 aa13.96□□□□□ -0.17
RBM39-202ENST00000338163 CPDO75976 1380 aa13.96□□□□□ -0.18
RBM39-202ENST00000338163 JCADQ9P266 1359 aa13.96□□□□□ -0.18
RBM39-202ENST00000338163 GLRX3O76003 335 aaKnown RBP13.95□□□□□ -0.18
RBM39-202ENST00000338163 PDCP20941 246 aa13.95□□□□□ -0.18
RBM39-202ENST00000338163 PTPN14Q15678 1187 aa13.95□□□□□ -0.18
RBM39-202ENST00000338163 ELF2Q15723 593 aa13.95□□□□□ -0.18
RBM39-202ENST00000338163 NBPF6Q5VWK0 638 aa13.95□□□□□ -0.18
RBM39-202ENST00000338163 NBPF4Q96M43 638 aa13.95□□□□□ -0.18
RBM39-202ENST00000338163 DDX19AQ9NUU7 478 aaKnown RBP13.95□□□□□ -0.18
RBM39-202ENST00000338163 NLRP2Q9NX02 1062 aa13.95□□□□□ -0.18
RBM39-202ENST00000338163 RBM8AQ9Y5S9 174 aaKnown RBP13.95□□□□□ -0.18
RBM39-202ENST00000338163 A0A087WWV3 80 aa13.95□□□□□ -0.18
RBM39-202ENST00000338163 FOSBP53539 338 aa13.95□□□□□ -0.18
RBM39-202ENST00000338163 KMT5BQ4FZB7 885 aa13.95□□□□□ -0.18
RBM39-202ENST00000338163 TAF3Q5VWG9 929 aa13.95□□□□□ -0.18
RBM39-202ENST00000338163 LEO1Q8WVC0 666 aaPredicted RBP13.95□□□□□ -0.18
RBM39-202ENST00000338163 SLFN14P0C7P3 912 aa13.94□□□□□ -0.18
RBM39-202ENST00000338163 SKILP12757 684 aa13.94□□□□□ -0.18
RBM39-202ENST00000338163 EVA1CP58658 441 aa13.94□□□□□ -0.18
RBM39-202ENST00000338163 CLASRPQ8N2M8 674 aaKnown RBP13.94□□□□□ -0.18
RBM39-202ENST00000338163 DDX11Q96FC9 970 aa13.94□□□□□ -0.18
RBM39-202ENST00000338163 ST7Q9NRC1 585 aa13.94□□□□□ -0.18
RBM39-202ENST00000338163 BTG4Q9NY30 223 aa13.94□□□□□ -0.18
RBM39-202ENST00000338163 USP16Q9Y5T5 823 aa13.94□□□□□ -0.18
RBM39-202ENST00000338163 PHRF1Q9P1Y6 1649 aaKnown RBP13.94□□□□□ -0.18
RBM39-202ENST00000338163 ERBB3P21860 1342 aa13.94□□□□□ -0.18
RBM39-202ENST00000338163 VGLL3A8MV65 326 aa13.94□□□□□ -0.18
RBM39-202ENST00000338163 FAM227BQ96M60 508 aa13.94□□□□□ -0.18
RBM39-202ENST00000338163 CLSTN2Q9H4D0 955 aa13.94□□□□□ -0.18
RBM39-202ENST00000338163 LTN1O94822 1766 aa13.94□□□□□ -0.18
RBM39-202ENST00000338163 BECN2A8MW95 431 aa13.94□□□□□ -0.18
RBM39-202ENST00000338163 IFIT2P09913 472 aaKnown RBP13.94□□□□□ -0.18
RBM39-202ENST00000338163 GTF2E1P29083 439 aaPredicted RBP13.94□□□□□ -0.18
RBM39-202ENST00000338163 SYCP1Q15431 976 aa13.94□□□□□ -0.18
RBM39-202ENST00000338163 CREB3L3Q68CJ9 461 aa13.94□□□□□ -0.18
RBM39-202ENST00000338163 TDRD7Q8NHU6 1098 aaKnown RBP13.94□□□□□ -0.18
RBM39-202ENST00000338163 ANXA1P04083 346 aa13.93□□□□□ -0.18
RBM39-202ENST00000338163 TAF7Q15545 349 aaPredicted RBP13.93□□□□□ -0.18
RBM39-202ENST00000338163 TERF2Q15554 542 aa13.93□□□□□ -0.18
RBM39-202ENST00000338163 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.93□□□□□ -0.18
RBM39-202ENST00000338163 LRRC8AQ8IWT6 810 aa13.93□□□□□ -0.18
RBM39-202ENST00000338163 ELP1O95163 1332 aa13.93□□□□□ -0.18
RBM39-202ENST00000338163 CCDC171Q6TFL3 1326 aa13.93□□□□□ -0.18
RBM39-202ENST00000338163 FBXO38Q6PIJ6 1188 aa13.93□□□□□ -0.18
RBM39-202ENST00000338163 BLOC1S2Q6QNY1 142 aa13.93□□□□□ -0.18
RBM39-202ENST00000338163 ZNF397Q8NF99 534 aaPredicted RBP13.93□□□□□ -0.18
RBM39-202ENST00000338163 SYTL4Q96C24 671 aaPredicted RBP13.93□□□□□ -0.18
RBM39-202ENST00000338163 C8orf37Q96NL8 207 aa13.93□□□□□ -0.18
RBM39-202ENST00000338163 MORC2Q9Y6X9 1032 aaPredicted RBP13.93□□□□□ -0.18
RBM39-202ENST00000338163 PA2G4Q9UQ80 394 aaKnown RBP13.92□□□□□ -0.18
RBM39-202ENST00000338163 GNAT3A8MTJ3 354 aa13.92□□□□□ -0.18
RBM39-202ENST00000338163 H3BQV1 296 aa13.92□□□□□ -0.18
RBM39-202ENST00000338163 IFFO2Q5TF58 517 aa13.92□□□□□ -0.18
RBM39-202ENST00000338163 TOM1L2Q6ZVM7 507 aa13.92□□□□□ -0.18
RBM39-202ENST00000338163 PGBD1Q96JS3 809 aa13.92□□□□□ -0.18
RBM39-202ENST00000338163 ECHDC1Q9NTX5 307 aa13.92□□□□□ -0.18
RBM39-202ENST00000338163 PI4KAP2A4QPH2 592 aa13.91□□□□□ -0.18
RBM39-202ENST00000338163 POLA2Q14181 598 aa13.91□□□□□ -0.18
RBM39-202ENST00000338163 C11orf57Q6ZUT1 292 aaPredicted RBP13.91□□□□□ -0.18
RBM39-202ENST00000338163 PI4KAP1Q8N8J0 262 aa13.91□□□□□ -0.18
RBM39-202ENST00000338163 GPATCH3Q96I76 525 aa13.91□□□□□ -0.18
RBM39-202ENST00000338163 TM6SF1Q9BZW5 370 aa13.91□□□□□ -0.18
RBM39-202ENST00000338163 TAF6LQ9Y6J9 622 aa13.91□□□□□ -0.18
RBM39-202ENST00000338163 IGSF1Q8N6C5 1336 aa13.91□□□□□ -0.18
RBM39-202ENST00000338163 TUBGCP6Q96RT7 1819 aa13.91□□□□□ -0.18
RBM39-202ENST00000338163 CCDC66A2RUB6 948 aa13.91□□□□□ -0.18
RBM39-202ENST00000338163 CCDC69A6NI79 296 aa13.91□□□□□ -0.18
RBM39-202ENST00000338163 JAK2O60674 1132 aa13.91□□□□□ -0.18
RBM39-202ENST00000338163 NECTIN1Q15223 517 aa13.91□□□□□ -0.18
RBM39-202ENST00000338163 AACSQ86V21 672 aa13.91□□□□□ -0.18
RBM39-202ENST00000338163 NGLY1Q96IV0 654 aa13.91□□□□□ -0.18
RBM39-202ENST00000338163 PSMA5P28066 241 aa13.9□□□□□ -0.18
RBM39-202ENST00000338163 HSP90AB4PQ58FF6 505 aa13.9□□□□□ -0.18
RBM39-202ENST00000338163 MEX3CQ5U5Q3 659 aaKnown RBP13.9□□□□□ -0.18
RBM39-202ENST00000338163 ERCC4Q92889 916 aaPredicted RBP13.9□□□□□ -0.18
RBM39-202ENST00000338163 TRERF1Q96PN7 1200 aa13.9□□□□□ -0.18
RBM39-202ENST00000338163 TMEM51Q9NW97 253 aa13.9□□□□□ -0.18
RBM39-202ENST00000338163 CRYBG1Q9Y4K1 1723 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms