RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 SPTLC3Q9NUV7 552 aa12.03□□□□□ -0.48
HIF1A-202ENST00000337138 KIF3AQ9Y496 699 aa12.03□□□□□ -0.48
HIF1A-202ENST00000337138 TTC41PQ6P2S7 1318 aa12.03□□□□□ -0.48
HIF1A-202ENST00000337138 DYNC1I1O14576 645 aa12.02□□□□□ -0.48
HIF1A-202ENST00000337138 KDM4AO75164 1064 aa12.02□□□□□ -0.48
HIF1A-202ENST00000337138 GTF2F1P35269 517 aaKnown RBP eCLIP12.02□□□□□ -0.49
HIF1A-202ENST00000337138 PDCL2Q8N4E4 241 aa12.02□□□□□ -0.49
HIF1A-202ENST00000337138 TM6SF1Q9BZW5 370 aa12.02□□□□□ -0.49
HIF1A-202ENST00000337138 ATP6V1DQ9Y5K8 247 aa12.02□□□□□ -0.49
HIF1A-202ENST00000337138 PRAMEF22A3QJZ6 481 aa12.02□□□□□ -0.49
HIF1A-202ENST00000337138 HMGN5P82970 282 aaKnown RBP12.02□□□□□ -0.49
HIF1A-202ENST00000337138 USPL1Q5W0Q7 1092 aa12.02□□□□□ -0.49
HIF1A-202ENST00000337138 DNAAF4Q8WXU2 420 aa12.02□□□□□ -0.49
HIF1A-202ENST00000337138 EDC3Q96F86 508 aaKnown RBP12.02□□□□□ -0.49
HIF1A-202ENST00000337138 FAM227BQ96M60 508 aa12.02□□□□□ -0.49
HIF1A-202ENST00000337138 MEGF6O75095 1541 aa12.02□□□□□ -0.49
HIF1A-202ENST00000337138 F13A1P00488 732 aa12.01□□□□□ -0.49
HIF1A-202ENST00000337138 MCM5P33992 734 aa12.01□□□□□ -0.49
HIF1A-202ENST00000337138 ZNF530Q6P9A1 599 aaPredicted RBP12.01□□□□□ -0.49
HIF1A-202ENST00000337138 TRIM5Q9C035 493 aa12.01□□□□□ -0.49
HIF1A-202ENST00000337138 BTBD11A6QL63 1104 aa12.01□□□□□ -0.49
HIF1A-202ENST00000337138 GIGYF1O75420 1035 aaPredicted RBP12.01□□□□□ -0.49
HIF1A-202ENST00000337138 RFX5P48382 616 aaPredicted RBP12.01□□□□□ -0.49
HIF1A-202ENST00000337138 RUFY2Q8WXA3 655 aa12.01□□□□□ -0.49
HIF1A-202ENST00000337138 GPATCH3Q96I76 525 aa12.01□□□□□ -0.49
HIF1A-202ENST00000337138 TRERF1Q96PN7 1200 aa12.01□□□□□ -0.49
HIF1A-202ENST00000337138 MTMR6Q9Y217 621 aa12.01□□□□□ -0.49
HIF1A-202ENST00000337138 G3BP1Q13283 466 aaKnown RBP eCLIP12.01□□□□□ -0.493e-6■■□□□ 12.1
HIF1A-202ENST00000337138 LUZP1Q86V48 1076 aa12.01□□□□□ -0.49
HIF1A-202ENST00000337138 DNAJC2Q99543 621 aaKnown RBP12.01□□□□□ -0.49
HIF1A-202ENST00000337138 WNK3Q9BYP7 1800 aa12.01□□□□□ -0.49
HIF1A-202ENST00000337138 ARHGEF25Q86VW2 580 aa12□□□□□ -0.49
HIF1A-202ENST00000337138 AXIN2Q9Y2T1 843 aa12□□□□□ -0.49
HIF1A-202ENST00000337138 IGKV5-2P06315 115 aa12□□□□□ -0.49
HIF1A-202ENST00000337138 CASP7P55210 303 aa12□□□□□ -0.49
HIF1A-202ENST00000337138 UBE2HP62256 183 aa12□□□□□ -0.49
HIF1A-202ENST00000337138 MAP4K1Q92918 833 aa12□□□□□ -0.49
HIF1A-202ENST00000337138 MAP3K2Q9Y2U5 619 aa12□□□□□ -0.49
HIF1A-202ENST00000337138 ERICH4A6NGS2 130 aa12□□□□□ -0.49
HIF1A-202ENST00000337138 H3BQV1 296 aa12□□□□□ -0.49
HIF1A-202ENST00000337138 PDE4CQ08493 712 aa12□□□□□ -0.49
HIF1A-202ENST00000337138 IFFO2Q5TF58 517 aa12□□□□□ -0.49
HIF1A-202ENST00000337138 KCNF1Q9H3M0 494 aa12□□□□□ -0.49
HIF1A-202ENST00000337138 ZNF330Q9Y3S2 320 aaPredicted RBP12□□□□□ -0.49
HIF1A-202ENST00000337138 GOLGA6L6A8MZA4 724 aa11.99□□□□□ -0.49
HIF1A-202ENST00000337138 C16orf45Q96MC5 204 aaPredicted RBP11.99□□□□□ -0.49
HIF1A-202ENST00000337138 LRP5O75197 1615 aa11.99□□□□□ -0.49
HIF1A-202ENST00000337138 NEDD4P46934 1319 aa11.99□□□□□ -0.49
HIF1A-202ENST00000337138 A0A087WWV3 80 aa11.99□□□□□ -0.49
HIF1A-202ENST00000337138 BCORQ6W2J9 1755 aa11.99□□□□□ -0.49
HIF1A-202ENST00000337138 MYH3P11055 1940 aa11.99□□□□□ -0.49
HIF1A-202ENST00000337138 NUTM2BA6NNL0 878 aaPredicted RBP11.99□□□□□ -0.49
HIF1A-202ENST00000337138 NUTM2EB1AL46 878 aaPredicted RBP11.99□□□□□ -0.49
HIF1A-202ENST00000337138 NUTM2AQ8IVF1 878 aaPredicted RBP11.99□□□□□ -0.49
HIF1A-202ENST00000337138 ZNF710Q8N1W2 664 aa11.99□□□□□ -0.49
HIF1A-202ENST00000337138 PTGS1P23219 599 aa11.98□□□□□ -0.49
HIF1A-202ENST00000337138 GUCY1B3Q02153 619 aa11.98□□□□□ -0.49
HIF1A-202ENST00000337138 RIC3Q7Z5B4 369 aa11.98□□□□□ -0.49
HIF1A-202ENST00000337138 TNMDQ9H2S6 317 aa11.98□□□□□ -0.49
HIF1A-202ENST00000337138 RBM8AQ9Y5S9 174 aaKnown RBP11.98□□□□□ -0.49
HIF1A-202ENST00000337138 ITGB4P16144 1822 aa11.98□□□□□ -0.49
HIF1A-202ENST00000337138 GLRX3O76003 335 aaKnown RBP11.98□□□□□ -0.49
HIF1A-202ENST00000337138 PSME1Q06323 249 aa11.98□□□□□ -0.49
HIF1A-202ENST00000337138 TOB2Q14106 344 aaPredicted RBP11.98□□□□□ -0.49
HIF1A-202ENST00000337138 CHD4Q14839 1912 aa11.98□□□□□ -0.49
HIF1A-202ENST00000337138 RREB1Q92766 1687 aa11.98□□□□□ -0.49
HIF1A-202ENST00000337138 VGLL3A8MV65 326 aa11.98□□□□□ -0.49
HIF1A-202ENST00000337138 CCDC192P0DO97 292 aa11.98□□□□□ -0.49
HIF1A-202ENST00000337138 ME3Q16798 604 aa11.98□□□□□ -0.49
HIF1A-202ENST00000337138 AKAP4Q5JQC9 854 aa11.98□□□□□ -0.49
HIF1A-202ENST00000337138 C1orf141Q5JVX7 400 aa11.98□□□□□ -0.49
HIF1A-202ENST00000337138 DACT1Q9NYF0 836 aa11.98□□□□□ -0.49
HIF1A-202ENST00000337138 PYCARDQ9ULZ3 195 aa11.98□□□□□ -0.49
HIF1A-202ENST00000337138 LRP6O75581 1613 aa11.97□□□□□ -0.49
HIF1A-202ENST00000337138 CICQ96RK0 1608 aaPredicted RBP11.97□□□□□ -0.49
HIF1A-202ENST00000337138 VPS53Q5VIR6 699 aa11.97□□□□□ -0.49
HIF1A-202ENST00000337138 CDC37L1Q7L3B6 337 aa11.97□□□□□ -0.49
HIF1A-202ENST00000337138 SPATA32Q96LK8 384 aa11.97□□□□□ -0.49
HIF1A-202ENST00000337138 NUP62CLQ9H1M0 184 aa11.97□□□□□ -0.49
HIF1A-202ENST00000337138 ECHDC1Q9NTX5 307 aa11.97□□□□□ -0.49
HIF1A-202ENST00000337138 CCDC171Q6TFL3 1326 aa11.97□□□□□ -0.49
HIF1A-202ENST00000337138 ADD1P35611 737 aaKnown RBP11.97□□□□□ -0.49
HIF1A-202ENST00000337138 SLC39A6Q13433 755 aa11.97□□□□□ -0.49
HIF1A-202ENST00000337138 BLOC1S2Q6QNY1 142 aa11.97□□□□□ -0.49
HIF1A-202ENST00000337138 FAM184AQ8NB25 1140 aa11.97□□□□□ -0.49
HIF1A-202ENST00000337138 ERCC4Q92889 916 aaPredicted RBP11.97□□□□□ -0.49
HIF1A-202ENST00000337138 LIG1P18858 919 aa11.97□□□□□ -0.49
HIF1A-202ENST00000337138 KRT85P78386 507 aa11.97□□□□□ -0.49
HIF1A-202ENST00000337138 LRMPQ12912 555 aa11.97□□□□□ -0.49
HIF1A-202ENST00000337138 NMIQ13287 307 aaPredicted RBP11.97□□□□□ -0.49
HIF1A-202ENST00000337138 ESCO1Q5FWF5 840 aa11.97□□□□□ -0.49
HIF1A-202ENST00000337138 PLCD3Q8N3E9 789 aa11.97□□□□□ -0.49
HIF1A-202ENST00000337138 RNMTO43148 476 aaKnown RBP11.96□□□□□ -0.49
HIF1A-202ENST00000337138 ZRSR1Q15695 479 aaKnown RBP11.96□□□□□ -0.49
HIF1A-202ENST00000337138 CCDC186Q7Z3E2 898 aa11.96□□□□□ -0.49
HIF1A-202ENST00000337138 FMNL2Q96PY5 1086 aa11.96□□□□□ -0.49
HIF1A-202ENST00000337138 TLR7Q9NYK1 1049 aaKnown RBP11.96□□□□□ -0.49
HIF1A-202ENST00000337138 TPCN1Q9ULQ1 816 aa11.96□□□□□ -0.49
HIF1A-202ENST00000337138 PALLDQ8WX93 1383 aa11.96□□□□□ -0.49
HIF1A-202ENST00000337138 SMAP1Q8IYB5 467 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms