RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.9■■■□□ 2.06
TSKU-201ENST00000333090 NPHP4O75161 1426 aaPredicted RBP27.89■■■□□ 2.06
TSKU-201ENST00000333090 SMTNL1A8MU46 457 aa27.89■■■□□ 2.06
TSKU-201ENST00000333090 JAK2O60674 1132 aa27.89■■■□□ 2.06
TSKU-201ENST00000333090 ZNF589Q86UQ0 364 aaPredicted RBP27.89■■■□□ 2.06
TSKU-201ENST00000333090 LMOD2Q6P5Q4 547 aa27.89■■■□□ 2.05
TSKU-201ENST00000333090 KSR2Q6VAB6 950 aa27.89■■■□□ 2.05
TSKU-201ENST00000333090 CACTINQ8WUQ7 758 aaKnown RBP27.89■■■□□ 2.05
TSKU-201ENST00000333090 SUCLG2Q96I99 432 aa27.88■■■□□ 2.05
TSKU-201ENST00000333090 CHD2O14647 1828 aaKnown RBP27.88■■■□□ 2.05
TSKU-201ENST00000333090 TPD52L1Q16890 204 aaPredicted RBP27.88■■■□□ 2.05
TSKU-201ENST00000333090 DDX11Q96FC9 970 aa27.88■■■□□ 2.05
TSKU-201ENST00000333090 BICC1Q9H694 974 aaKnown RBP27.88■■■□□ 2.05
TSKU-201ENST00000333090 HDAC5Q9UQL6 1122 aa27.88■■■□□ 2.05
TSKU-201ENST00000333090 FER1L4A9Z1Z3 1794 aa27.87■■■□□ 2.05
TSKU-201ENST00000333090 CCDC144BQ3MJ40 725 aa27.87■■■□□ 2.05
TSKU-201ENST00000333090 ZNF530Q6P9A1 599 aaPredicted RBP27.87■■■□□ 2.05
TSKU-201ENST00000333090 CCDC144CPQ8IYA2 1237 aa27.87■■■□□ 2.05
TSKU-201ENST00000333090 SNRKQ9NRH2 765 aa27.87■■■□□ 2.05
TSKU-201ENST00000333090 GRM8O00222 908 aa27.85■■■□□ 2.05
TSKU-201ENST00000333090 NAA30Q147X3 362 aaPredicted RBP27.85■■■□□ 2.05
TSKU-201ENST00000333090 CCDC112Q8NEF3 446 aa27.85■■■□□ 2.05
TSKU-201ENST00000333090 BRF1Q92994 677 aa27.85■■■□□ 2.05
TSKU-201ENST00000333090 KAZALD1Q96I82 304 aa27.85■■■□□ 2.05
TSKU-201ENST00000333090 ADGRL3Q9HAR2 1447 aa27.85■■■□□ 2.05
TSKU-201ENST00000333090 MED23Q9ULK4 1368 aa27.85■■■□□ 2.05
TSKU-201ENST00000333090 CEBPZQ03701 1054 aaKnown RBP27.84■■■□□ 2.05
TSKU-201ENST00000333090 PSME1Q06323 249 aa27.84■■■□□ 2.05
TSKU-201ENST00000333090 ZNF592Q92610 1267 aa27.84■■■□□ 2.05
TSKU-201ENST00000333090 EDC3Q96F86 508 aaKnown RBP27.84■■■□□ 2.05
TSKU-201ENST00000333090 BCL11BQ9C0K0 894 aaPredicted RBP27.84■■■□□ 2.05
TSKU-201ENST00000333090 ALDH8A1Q9H2A2 487 aaPredicted RBP27.84■■■□□ 2.05
TSKU-201ENST00000333090 HMG20BQ9P0W2 317 aa27.84■■■□□ 2.05
TSKU-201ENST00000333090 H3BQV1 296 aa27.84■■■□□ 2.05
TSKU-201ENST00000333090 IGSF3O75054 1194 aa27.84■■■□□ 2.05
TSKU-201ENST00000333090 IFFO2Q5TF58 517 aa27.84■■■□□ 2.05
TSKU-201ENST00000333090 KLHDC4Q8TBB5 520 aa27.84■■■□□ 2.05
TSKU-201ENST00000333090 FEZ1Q99689 392 aa27.84■■■□□ 2.05
TSKU-201ENST00000333090 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.83■■■□□ 2.05
TSKU-201ENST00000333090 PRAMEF22A3QJZ6 481 aa27.83■■■□□ 2.05
TSKU-201ENST00000333090 MED1Q15648 1581 aaPredicted RBP27.83■■■□□ 2.05
TSKU-201ENST00000333090 GOLGA6L19H0YKK7 550 aa27.83■■■□□ 2.05
TSKU-201ENST00000333090 GTF3C6Q969F1 213 aa27.83■■■□□ 2.05
TSKU-201ENST00000333090 PAXBP1Q9Y5B6 917 aa27.83■■■□□ 2.05
TSKU-201ENST00000333090 AIMP1Q12904 312 aaKnown RBP27.83■■■□□ 2.04
TSKU-201ENST00000333090 ORAI2Q96SN7 254 aa27.83■■■□□ 2.04
TSKU-201ENST00000333090 HSP90B1P14625 803 aaKnown RBP27.82■■■□□ 2.04
TSKU-201ENST00000333090 RESTQ13127 1097 aa27.82■■■□□ 2.04
TSKU-201ENST00000333090 TAF5LO75529 589 aa27.82■■■□□ 2.04
TSKU-201ENST00000333090 IP6K1Q92551 441 aa27.82■■■□□ 2.04
TSKU-201ENST00000333090 GIGYF1O75420 1035 aaPredicted RBP27.81■■■□□ 2.04
TSKU-201ENST00000333090 AKAP4Q5JQC9 854 aa27.81■■■□□ 2.04
TSKU-201ENST00000333090 LINS1Q8NG48 757 aa27.81■■■□□ 2.04
TSKU-201ENST00000333090 KDM3BQ7LBC6 1761 aa27.81■■■□□ 2.04
TSKU-201ENST00000333090 KIF20AO95235 890 aa27.81■■■□□ 2.04
TSKU-201ENST00000333090 SYCP1Q15431 976 aa27.81■■■□□ 2.04
TSKU-201ENST00000333090 OGFRQ9NZT2 677 aa27.8■■■□□ 2.04
TSKU-201ENST00000333090 ARID5BQ14865 1188 aa27.8■■■□□ 2.04
TSKU-201ENST00000333090 MARF1Q9Y4F3 1742 aaKnown RBP27.79■■■□□ 2.04
TSKU-201ENST00000333090 TSGA10IPQ3SY00 556 aa27.79■■■□□ 2.04
TSKU-201ENST00000333090 C11orf57Q6ZUT1 292 aaPredicted RBP27.79■■■□□ 2.04
TSKU-201ENST00000333090 NEK1Q96PY6 1258 aa27.79■■■□□ 2.04
TSKU-201ENST00000333090 CTNNA3Q9UI47 895 aa27.79■■■□□ 2.04
TSKU-201ENST00000333090 CAVIN2O95810 425 aa27.79■■■□□ 2.04
TSKU-201ENST00000333090 CEP135Q66GS9 1140 aa27.79■■■□□ 2.04
TSKU-201ENST00000333090 LRRC8AQ8IWT6 810 aa27.79■■■□□ 2.04
TSKU-201ENST00000333090 CFAP45Q9UL16 551 aa27.79■■■□□ 2.04
TSKU-201ENST00000333090 IQCB1Q15051 598 aa27.78■■■□□ 2.04
TSKU-201ENST00000333090 Q6ZUG5 572 aa27.78■■■□□ 2.04
TSKU-201ENST00000333090 FOSBP53539 338 aa27.78■■■□□ 2.04
TSKU-201ENST00000333090 KRT32Q14532 448 aa27.78■■■□□ 2.04
TSKU-201ENST00000333090 CDC25BP30305 580 aa27.77■■■□□ 2.04
TSKU-201ENST00000333090 LRRC2Q9BYS8 371 aa27.77■■■□□ 2.04
TSKU-201ENST00000333090 CGNQ9P2M7 1197 aaKnown RBP27.77■■■□□ 2.04
TSKU-201ENST00000333090 USP27XA6NNY8 438 aa27.76■■■□□ 2.04
TSKU-201ENST00000333090 PLEKHO1Q53GL0 409 aaPredicted RBP27.76■■■□□ 2.04
TSKU-201ENST00000333090 ZSCAN16Q9H4T2 348 aaPredicted RBP27.76■■■□□ 2.04
TSKU-201ENST00000333090 RNMTO43148 476 aaKnown RBP27.76■■■□□ 2.03
TSKU-201ENST00000333090 NDUFB9Q9Y6M9 179 aa27.76■■■□□ 2.03
TSKU-201ENST00000333090 ANKARQ7Z5J8 1434 aa27.76■■■□□ 2.03
TSKU-201ENST00000333090 C1orf141Q5JVX7 400 aa27.76■■■□□ 2.03
TSKU-201ENST00000333090 ANKLE2Q86XL3 938 aa27.76■■■□□ 2.03
TSKU-201ENST00000333090 FTOQ9C0B1 505 aaKnown RBP eCLIP27.76■■■□□ 2.03
TSKU-201ENST00000333090 FGD1P98174 961 aa27.75■■■□□ 2.03
TSKU-201ENST00000333090 JCADQ9P266 1359 aa27.75■■■□□ 2.03
TSKU-201ENST00000333090 A0A087WWV3 80 aa27.75■■■□□ 2.03
TSKU-201ENST00000333090 BECN2A8MW95 431 aa27.75■■■□□ 2.03
TSKU-201ENST00000333090 DDX58O95786 925 aaKnown RBP27.75■■■□□ 2.03
TSKU-201ENST00000333090 USPL1Q5W0Q7 1092 aa27.75■■■□□ 2.03
TSKU-201ENST00000333090 CCDC129Q6ZRS4 1044 aa27.75■■■□□ 2.03
TSKU-201ENST00000333090 COL15A1P39059 1388 aa27.75■■■□□ 2.03
TSKU-201ENST00000333090 CHGBP05060 677 aa27.74■■■□□ 2.03
TSKU-201ENST00000333090 SARM1Q6SZW1 724 aa27.74■■■□□ 2.03
TSKU-201ENST00000333090 FILIP1Q7Z7B0 1213 aa27.74■■■□□ 2.03
TSKU-201ENST00000333090 CCAR1Q8IX12 1150 aaKnown RBP27.74■■■□□ 2.03
TSKU-201ENST00000333090 USP16Q9Y5T5 823 aa27.74■■■□□ 2.03
TSKU-201ENST00000333090 STX1AQ16623 288 aa27.74■■■□□ 2.03
TSKU-201ENST00000333090 MRFAP1L1Q96HT8 127 aa27.74■■■□□ 2.03
TSKU-201ENST00000333090 UTYO14607 1347 aa27.73■■■□□ 2.03
TSKU-201ENST00000333090 SKILP12757 684 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms