RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 ERC1Q8IUD2 1116 aa11.77□□□□□ -0.53
C11orf54-201ENST00000331239 COPRSQ9NQ92 184 aa11.77□□□□□ -0.53
C11orf54-201ENST00000331239 PARP3Q9Y6F1 533 aa11.77□□□□□ -0.53
C11orf54-201ENST00000331239 SERPINB2P05120 415 aa11.76□□□□□ -0.53
C11orf54-201ENST00000331239 CTSWP56202 376 aa11.76□□□□□ -0.53
C11orf54-201ENST00000331239 FAM161AQ3B820 660 aa11.76□□□□□ -0.53
C11orf54-201ENST00000331239 CCDC152Q4G0S7 254 aa11.76□□□□□ -0.53
C11orf54-201ENST00000331239 CNBD1Q8NA66 436 aa11.76□□□□□ -0.53
C11orf54-201ENST00000331239 BICC1Q9H694 974 aaKnown RBP11.76□□□□□ -0.53
C11orf54-201ENST00000331239 CIAO1O76071 339 aa11.76□□□□□ -0.53
C11orf54-201ENST00000331239 DEKP35659 375 aaKnown RBP11.76□□□□□ -0.53
C11orf54-201ENST00000331239 FAM89AQ96GI7 184 aa11.76□□□□□ -0.53
C11orf54-201ENST00000331239 NLRP3Q96P20 1036 aa11.76□□□□□ -0.53
C11orf54-201ENST00000331239 MTFR1LQ9H019 292 aa11.76□□□□□ -0.53
C11orf54-201ENST00000331239 GTF2E1P29083 439 aaPredicted RBP11.75□□□□□ -0.53
C11orf54-201ENST00000331239 TMC4Q7Z404 712 aa11.75□□□□□ -0.53
C11orf54-201ENST00000331239 SIRT2Q8IXJ6 389 aa11.75□□□□□ -0.53
C11orf54-201ENST00000331239 BRIP1Q9BX63 1249 aa11.75□□□□□ -0.53
C11orf54-201ENST00000331239 TTLL11Q8NHH1 800 aa11.75□□□□□ -0.53
C11orf54-201ENST00000331239 KIF13BQ9NQT8 1826 aa11.74□□□□□ -0.53
C11orf54-201ENST00000331239 SRGAP3O43295 1099 aa11.74□□□□□ -0.53
C11orf54-201ENST00000331239 PDE6BP35913 854 aa11.74□□□□□ -0.53
C11orf54-201ENST00000331239 C8orf34Q49A92 452 aa11.74□□□□□ -0.53
C11orf54-201ENST00000331239 CRY2Q49AN0 593 aa11.74□□□□□ -0.53
C11orf54-201ENST00000331239 PRR5LQ6MZQ0 368 aa11.74□□□□□ -0.53
C11orf54-201ENST00000331239 LMBR1LQ6UX01 489 aa11.74□□□□□ -0.53
C11orf54-201ENST00000331239 ANKRD18BA2A2Z9 1011 aa11.73□□□□□ -0.53
C11orf54-201ENST00000331239 HOXA10P31260 410 aaPredicted RBP11.73□□□□□ -0.53
C11orf54-201ENST00000331239 RFX5P48382 616 aaPredicted RBP11.73□□□□□ -0.53
C11orf54-201ENST00000331239 RGS3P49796 1198 aa11.73□□□□□ -0.53
C11orf54-201ENST00000331239 DDR1Q08345 913 aa11.73□□□□□ -0.53
C11orf54-201ENST00000331239 IFIT5Q13325 482 aaKnown RBP11.73□□□□□ -0.53
C11orf54-201ENST00000331239 CCDC57Q2TAC2 916 aa11.73□□□□□ -0.53
C11orf54-201ENST00000331239 ERFEQ4G0M1 354 aa11.73□□□□□ -0.53
C11orf54-201ENST00000331239 CDC5LQ99459 802 aaKnown RBP11.73□□□□□ -0.53
C11orf54-201ENST00000331239 GPR108Q9NPR9 543 aa11.73□□□□□ -0.53
C11orf54-201ENST00000331239 LRP5O75197 1615 aa11.72□□□□□ -0.53
C11orf54-201ENST00000331239 MMP10P09238 476 aa11.72□□□□□ -0.53
C11orf54-201ENST00000331239 EPHA10Q5JZY3 1008 aa11.72□□□□□ -0.53
C11orf54-201ENST00000331239 CRAMP1Q96RY5 1269 aa11.72□□□□□ -0.53
C11orf54-201ENST00000331239 PNMA6EA0A0J9YXQ4 647 aa11.71□□□□□ -0.53
C11orf54-201ENST00000331239 POLD1P28340 1107 aa11.71□□□□□ -0.53
C11orf54-201ENST00000331239 BICDL1Q6ZP65 573 aa11.71□□□□□ -0.53
C11orf54-201ENST00000331239 C1orf115Q9H7X2 142 aa11.71□□□□□ -0.53
C11orf54-201ENST00000331239 IL15P40933 162 aaPredicted RBP11.71□□□□□ -0.53
C11orf54-201ENST00000331239 G3BP1Q13283 466 aaKnown RBP eCLIP11.71□□□□□ -0.53
C11orf54-201ENST00000331239 GRIPAP1Q4V328 841 aa11.71□□□□□ -0.53
C11orf54-201ENST00000331239 KIF1BPQ96EK5 621 aa11.71□□□□□ -0.53
C11orf54-201ENST00000331239 NPHP1O15259 732 aa11.7□□□□□ -0.54
C11orf54-201ENST00000331239 IGHDP01880 384 aa11.7□□□□□ -0.54
C11orf54-201ENST00000331239 NUCB1Q02818 461 aa11.7□□□□□ -0.54
C11orf54-201ENST00000331239 PTPN12Q05209 780 aaKnown RBP11.7□□□□□ -0.54
C11orf54-201ENST00000331239 RBM17Q96I25 401 aaKnown RBP11.7□□□□□ -0.54
C11orf54-201ENST00000331239 C10orf71Q711Q0 1435 aa11.7□□□□□ -0.54
C11orf54-201ENST00000331239 SMIM5Q71RC9 77 aa11.7□□□□□ -0.54
C11orf54-201ENST00000331239 ANKRD31Q8N7Z5 1873 aa11.7□□□□□ -0.54
C11orf54-201ENST00000331239 ABCC12Q96J65 1359 aa11.7□□□□□ -0.54
C11orf54-201ENST00000331239 MROH5Q6ZUA9 1318 aa11.7□□□□□ -0.54
C11orf54-201ENST00000331239 EYA2O00167 538 aa11.69□□□□□ -0.54
C11orf54-201ENST00000331239 BBOX1O75936 387 aa11.69□□□□□ -0.54
C11orf54-201ENST00000331239 ALDH1B1P30837 517 aa11.69□□□□□ -0.54
C11orf54-201ENST00000331239 STYK1Q6J9G0 422 aa11.69□□□□□ -0.54
C11orf54-201ENST00000331239 PPP4R3CPQ6ZMV5 832 aa11.69□□□□□ -0.54
C11orf54-201ENST00000331239 DDX46Q7L014 1031 aaKnown RBP11.69□□□□□ -0.54
C11orf54-201ENST00000331239 DLEC1Q9Y238 1755 aa11.69□□□□□ -0.54
C11orf54-201ENST00000331239 SURF6O75683 361 aaKnown RBP11.69□□□□□ -0.54
C11orf54-201ENST00000331239 HCLS1P14317 486 aaPredicted RBP11.69□□□□□ -0.54
C11orf54-201ENST00000331239 NPR1P16066 1061 aa11.69□□□□□ -0.54
C11orf54-201ENST00000331239 ITGA6P23229 1130 aa11.69□□□□□ -0.54
C11orf54-201ENST00000331239 IGHMBP2P38935 993 aaKnown RBP11.69□□□□□ -0.54
C11orf54-201ENST00000331239 NUTM1Q86Y26 1132 aa11.69□□□□□ -0.54
C11orf54-201ENST00000331239 BSDC1Q9NW68 430 aaPredicted RBP11.69□□□□□ -0.54
C11orf54-201ENST00000331239 TGFB2P61812 414 aa11.68□□□□□ -0.54
C11orf54-201ENST00000331239 UBE2Q2Q8WVN8 375 aa11.68□□□□□ -0.54
C11orf54-201ENST00000331239 LRRCC1Q9C099 1032 aa11.68□□□□□ -0.54
C11orf54-201ENST00000331239 GREM2Q9H772 168 aa11.68□□□□□ -0.54
C11orf54-201ENST00000331239 AKAP2Q9Y2D5 859 aa11.68□□□□□ -0.54
C11orf54-201ENST00000331239 CD2APQ9Y5K6 639 aa11.68□□□□□ -0.54
C11orf54-201ENST00000331239 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
C11orf54-201ENST00000331239 GRAPQ13588 217 aa11.67□□□□□ -0.54
C11orf54-201ENST00000331239 R3HDM1Q15032 1099 aaKnown RBP11.67□□□□□ -0.54
C11orf54-201ENST00000331239 TAF7LQ5H9L4 462 aa11.67□□□□□ -0.54
C11orf54-201ENST00000331239 TICAM2Q86XR7 235 aa11.67□□□□□ -0.54
C11orf54-201ENST00000331239 ANKRD18AQ8IVF6 992 aa11.67□□□□□ -0.54
C11orf54-201ENST00000331239 GRAPLQ8TC17 118 aaPredicted RBP11.67□□□□□ -0.54
C11orf54-201ENST00000331239 RPGRQ92834 1020 aaKnown RBP11.67□□□□□ -0.54
C11orf54-201ENST00000331239 MASTLQ96GX5 879 aa11.67□□□□□ -0.54
C11orf54-201ENST00000331239 SGIP1Q9BQI5 828 aa11.67□□□□□ -0.54
C11orf54-201ENST00000331239 ANKRD2Q9GZV1 360 aa11.67□□□□□ -0.54
C11orf54-201ENST00000331239 AOX1Q06278 1338 aa11.67□□□□□ -0.54
C11orf54-201ENST00000331239 RPS8P62241 208 aaKnown RBP11.67□□□□□ -0.54
C11orf54-201ENST00000331239 CC2D2BQ6DHV5 1058 aa11.67□□□□□ -0.54
C11orf54-201ENST00000331239 CHD1LQ86WJ1 897 aa11.67□□□□□ -0.54
C11orf54-201ENST00000331239 SYNE4Q8N205 404 aa11.67□□□□□ -0.54
C11orf54-201ENST00000331239 RIPOR2Q9Y4F9 1068 aa11.67□□□□□ -0.54
C11orf54-201ENST00000331239 SOCS7O14512 581 aa11.66□□□□□ -0.54
C11orf54-201ENST00000331239 SRGNP10124 158 aa11.66□□□□□ -0.54
C11orf54-201ENST00000331239 RHPN1Q8TCX5 695 aa11.66□□□□□ -0.54
C11orf54-201ENST00000331239 JARID2Q92833 1246 aaPredicted RBP11.66□□□□□ -0.54
C11orf54-201ENST00000331239 MPHOSPH8Q99549 860 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms