RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 RGPD5Q99666 1765 aa20.22■□□□□ 0.83
PRKCD-201ENST00000330452 SGSM2O43147 1006 aa20.22■□□□□ 0.83
PRKCD-201ENST00000330452 PLEKHO1Q53GL0 409 aaPredicted RBP20.22■□□□□ 0.83
PRKCD-201ENST00000330452 C1orf141Q5JVX7 400 aa20.22■□□□□ 0.83
PRKCD-201ENST00000330452 TICAM2Q86XR7 235 aa20.22■□□□□ 0.83
PRKCD-201ENST00000330452 INTS4Q96HW7 963 aaKnown RBP20.22■□□□□ 0.83
PRKCD-201ENST00000330452 MED1Q15648 1581 aaPredicted RBP20.21■□□□□ 0.83
PRKCD-201ENST00000330452 OS9Q13438 667 aaPredicted RBP20.21■□□□□ 0.83
PRKCD-201ENST00000330452 PYCARDQ9ULZ3 195 aa20.21■□□□□ 0.83
PRKCD-201ENST00000330452 KMT5BQ4FZB7 885 aa20.21■□□□□ 0.83
PRKCD-201ENST00000330452 CWC27Q6UX04 472 aaKnown RBP20.21■□□□□ 0.83
PRKCD-201ENST00000330452 IL17RAQ96F46 866 aa20.21■□□□□ 0.83
PRKCD-201ENST00000330452 LARP6Q9BRS8 491 aaKnown RBP20.21■□□□□ 0.83
PRKCD-201ENST00000330452 ERBB3P21860 1342 aa20.21■□□□□ 0.83
PRKCD-201ENST00000330452 GOLGA6L6A8MZA4 724 aa20.2■□□□□ 0.82
PRKCD-201ENST00000330452 RBM6P78332 1123 aaKnown RBP20.2■□□□□ 0.82
PRKCD-201ENST00000330452 ZNF397Q8NF99 534 aaPredicted RBP20.2■□□□□ 0.82
PRKCD-201ENST00000330452 USP25Q9UHP3 1055 aa20.2■□□□□ 0.82
PRKCD-201ENST00000330452 RNMTO43148 476 aaKnown RBP20.2■□□□□ 0.82
PRKCD-201ENST00000330452 TSGA10IPQ3SY00 556 aa20.2■□□□□ 0.82
PRKCD-201ENST00000330452 BRINP3Q76B58 766 aa20.2■□□□□ 0.82
PRKCD-201ENST00000330452 CNTROBQ8N137 903 aa20.2■□□□□ 0.82
PRKCD-201ENST00000330452 SPG7Q9UQ90 795 aa20.2■□□□□ 0.82
PRKCD-201ENST00000330452 MAP3K2Q9Y2U5 619 aa20.2■□□□□ 0.82
PRKCD-201ENST00000330452 CADPS2Q86UW7 1296 aa20.2■□□□□ 0.82
PRKCD-201ENST00000330452 RASEFQ8IZ41 740 aa20.2■□□□□ 0.82
PRKCD-201ENST00000330452 JRKLQ9Y4A0 524 aa20.2■□□□□ 0.82
PRKCD-201ENST00000330452 ADCY5O95622 1261 aa20.19■□□□□ 0.82
PRKCD-201ENST00000330452 LSG1Q9H089 658 aaKnown RBP20.19■□□□□ 0.82
PRKCD-201ENST00000330452 GDPD2Q9HCC8 539 aa20.19■□□□□ 0.82
PRKCD-201ENST00000330452 DBF4Q9UBU7 674 aaPredicted RBP20.19■□□□□ 0.82
PRKCD-201ENST00000330452 LCMT1Q9UIC8 334 aa20.19■□□□□ 0.82
PRKCD-201ENST00000330452 PA2G4Q9UQ80 394 aaKnown RBP20.19■□□□□ 0.82
PRKCD-201ENST00000330452 SNX14Q9Y5W7 946 aa20.19■□□□□ 0.82
PRKCD-201ENST00000330452 CWF19L2Q2TBE0 894 aaKnown RBP20.19■□□□□ 0.82
PRKCD-201ENST00000330452 SMTNL1A8MU46 457 aa20.18■□□□□ 0.82
PRKCD-201ENST00000330452 DRC1Q96MC2 740 aa20.18■□□□□ 0.82
PRKCD-201ENST00000330452 ATG3Q9NT62 314 aa20.18■□□□□ 0.82
PRKCD-201ENST00000330452 C9orf78Q9NZ63 289 aaPredicted RBP20.18■□□□□ 0.82
PRKCD-201ENST00000330452 DNAJC21Q5F1R6 531 aaKnown RBP20.18■□□□□ 0.82
PRKCD-201ENST00000330452 KDM3BQ7LBC6 1761 aa20.18■□□□□ 0.82
PRKCD-201ENST00000330452 RNF217Q8TC41 542 aa20.18■□□□□ 0.82
PRKCD-201ENST00000330452 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.18■□□□□ 0.82
PRKCD-201ENST00000330452 GOLIM4O00461 696 aa20.17■□□□□ 0.82
PRKCD-201ENST00000330452 GIGYF1O75420 1035 aaPredicted RBP20.17■□□□□ 0.82
PRKCD-201ENST00000330452 KCNF1Q9H3M0 494 aa20.17■□□□□ 0.82
PRKCD-201ENST00000330452 CPA1P15085 419 aa20.17■□□□□ 0.82
PRKCD-201ENST00000330452 AIMP1Q12904 312 aaKnown RBP20.17■□□□□ 0.82
PRKCD-201ENST00000330452 HSP90AB4PQ58FF6 505 aa20.16■□□□□ 0.82
PRKCD-201ENST00000330452 UVSSAQ2YD98 709 aa20.16■□□□□ 0.82
PRKCD-201ENST00000330452 AMOTQ4VCS5 1084 aa20.16■□□□□ 0.82
PRKCD-201ENST00000330452 RAPGEF4Q8WZA2 1011 aa20.16■□□□□ 0.82
PRKCD-201ENST00000330452 EPB41L2O43491 1005 aaKnown RBP20.15■□□□□ 0.82
PRKCD-201ENST00000330452 NEK11Q8NG66 645 aa20.15■□□□□ 0.82
PRKCD-201ENST00000330452 DTNBO60941 627 aa20.15■□□□□ 0.82
PRKCD-201ENST00000330452 AK2P54819 239 aa20.15■□□□□ 0.82
PRKCD-201ENST00000330452 SART3Q15020 963 aaKnown RBP20.15■□□□□ 0.82
PRKCD-201ENST00000330452 CLASRPQ8N2M8 674 aaKnown RBP20.15■□□□□ 0.82
PRKCD-201ENST00000330452 CXorf56Q9H5V9 222 aa20.15■□□□□ 0.82
PRKCD-201ENST00000330452 STRN4Q9NRL3 753 aa20.15■□□□□ 0.82
PRKCD-201ENST00000330452 NPHP3Q7Z494 1330 aa20.14■□□□□ 0.82
PRKCD-201ENST00000330452 GADD45BO75293 160 aaPredicted RBP20.14■□□□□ 0.82
PRKCD-201ENST00000330452 GLRX3O76003 335 aaKnown RBP20.14■□□□□ 0.82
PRKCD-201ENST00000330452 MBD3O95983 291 aa20.14■□□□□ 0.82
PRKCD-201ENST00000330452 KSR2Q6VAB6 950 aa20.14■□□□□ 0.82
PRKCD-201ENST00000330452 TTC14Q96N46 770 aa20.14■□□□□ 0.82
PRKCD-201ENST00000330452 MTX1Q13505 466 aa20.14■□□□□ 0.81
PRKCD-201ENST00000330452 SH3BP1Q9Y3L3 701 aa20.14■□□□□ 0.81
PRKCD-201ENST00000330452 TRPM3Q9HCF6 1732 aaPredicted RBP20.13■□□□□ 0.81
PRKCD-201ENST00000330452 KRBA2Q6ZNG9 492 aa20.13■□□□□ 0.81
PRKCD-201ENST00000330452 PLCD4Q9BRC7 762 aa20.13■□□□□ 0.81
PRKCD-201ENST00000330452 MAP2K1Q02750 393 aaPredicted RBP20.13■□□□□ 0.81
PRKCD-201ENST00000330452 PTH1RQ03431 593 aa20.13■□□□□ 0.81
PRKCD-201ENST00000330452 RUFY3Q7L099 469 aa20.13■□□□□ 0.81
PRKCD-201ENST00000330452 SLAIN2Q9P270 581 aa20.13■□□□□ 0.81
PRKCD-201ENST00000330452 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.13■□□□□ 0.81
PRKCD-201ENST00000330452 TTC41PQ6P2S7 1318 aa20.13■□□□□ 0.81
PRKCD-201ENST00000330452 USP42Q9H9J4 1324 aaKnown RBP20.13■□□□□ 0.81
PRKCD-201ENST00000330452 SGSM3Q96HU1 749 aa20.12■□□□□ 0.81
PRKCD-201ENST00000330452 SUFUQ9UMX1 484 aa20.12■□□□□ 0.81
PRKCD-201ENST00000330452 LMO7Q8WWI1 1683 aa20.12■□□□□ 0.81
PRKCD-201ENST00000330452 KIF1CO43896 1103 aaKnown RBP20.12■□□□□ 0.81
PRKCD-201ENST00000330452 ALDH1L1O75891 902 aa20.12■□□□□ 0.81
PRKCD-201ENST00000330452 SEMA3FQ13275 785 aa20.12■□□□□ 0.81
PRKCD-201ENST00000330452 ECHDC1Q9NTX5 307 aa20.12■□□□□ 0.81
PRKCD-201ENST00000330452 WDR33Q9C0J8 1336 aaKnown RBP20.12■□□□□ 0.81
PRKCD-201ENST00000330452 RPAP1Q9BWH6 1393 aaPredicted RBP20.11■□□□□ 0.81
PRKCD-201ENST00000330452 TNNT1P13805 278 aa20.11■□□□□ 0.81
PRKCD-201ENST00000330452 MYL6BP14649 208 aa20.11■□□□□ 0.81
PRKCD-201ENST00000330452 ATP2B1P20020 1258 aa20.11■□□□□ 0.81
PRKCD-201ENST00000330452 TDO2P48775 406 aa20.11■□□□□ 0.81
PRKCD-201ENST00000330452 TPRNQ4KMQ1 711 aa20.11■□□□□ 0.81
PRKCD-201ENST00000330452 USP48Q86UV5 1035 aa20.11■□□□□ 0.81
PRKCD-201ENST00000330452 TXLNBQ8N3L3 684 aa20.11■□□□□ 0.81
PRKCD-201ENST00000330452 FAM184AQ8NB25 1140 aa20.11■□□□□ 0.81
PRKCD-201ENST00000330452 PRDM11Q9NQV5 511 aa20.11■□□□□ 0.81
PRKCD-201ENST00000330452 IFIT2P09913 472 aaKnown RBP20.11■□□□□ 0.81
PRKCD-201ENST00000330452 CASTP20810 708 aaKnown RBP20.11■□□□□ 0.81
PRKCD-201ENST00000330452 SUCLG2Q96I99 432 aa20.11■□□□□ 0.81
PRKCD-201ENST00000330452 SPATA31A3Q5VYP0 1347 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms