RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 CHMP3Q9Y3E7 222 aa23.25■■□□□ 1.31
EXOSC3-201ENST00000327304 CSF1RP07333 972 aa23.24■■□□□ 1.31
EXOSC3-201ENST00000327304 R3HDM1Q15032 1099 aaKnown RBP23.24■■□□□ 1.31
EXOSC3-201ENST00000327304 PRR5LQ6MZQ0 368 aa23.24■■□□□ 1.31
EXOSC3-201ENST00000327304 CCDC85AQ96PX6 553 aaPredicted RBP23.24■■□□□ 1.31
EXOSC3-201ENST00000327304 SLC10A5Q5PT55 438 aa23.24■■□□□ 1.31
EXOSC3-201ENST00000327304 C3orf67Q6ZVT6 689 aa23.24■■□□□ 1.31
EXOSC3-201ENST00000327304 CHD1LQ86WJ1 897 aa23.24■■□□□ 1.31
EXOSC3-201ENST00000327304 TTLL11Q8NHH1 800 aa23.24■■□□□ 1.31
EXOSC3-201ENST00000327304 CASZ1Q86V15 1759 aa23.23■■□□□ 1.31
EXOSC3-201ENST00000327304 NPHP1O15259 732 aa23.23■■□□□ 1.31
EXOSC3-201ENST00000327304 DCTPP1Q9H773 170 aa23.23■■□□□ 1.31
EXOSC3-201ENST00000327304 TNRC6CQ9HCJ0 1690 aaKnown RBP23.22■■□□□ 1.31
EXOSC3-201ENST00000327304 NRXN2Q9P2S2 1712 aa23.22■■□□□ 1.31
EXOSC3-201ENST00000327304 HSP90B1P14625 803 aaKnown RBP23.22■■□□□ 1.31
EXOSC3-201ENST00000327304 RFX5P48382 616 aaPredicted RBP23.22■■□□□ 1.31
EXOSC3-201ENST00000327304 PA2G4Q9UQ80 394 aaKnown RBP23.22■■□□□ 1.31
EXOSC3-201ENST00000327304 KLHDC4Q8TBB5 520 aa23.21■■□□□ 1.31
EXOSC3-201ENST00000327304 GREM2Q9H772 168 aa23.21■■□□□ 1.31
EXOSC3-201ENST00000327304 PARP3Q9Y6F1 533 aa23.21■■□□□ 1.31
EXOSC3-201ENST00000327304 SLC16A10Q8TF71 515 aa23.2■■□□□ 1.3
EXOSC3-201ENST00000327304 EXOC6BQ9Y2D4 811 aa23.2■■□□□ 1.3
EXOSC3-201ENST00000327304 ANP32AP39687 249 aaKnown RBP23.19■■□□□ 1.3
EXOSC3-201ENST00000327304 PSDA5PKW4 1024 aaPredicted RBP23.19■■□□□ 1.3
EXOSC3-201ENST00000327304 ST5P78524 1137 aa23.19■■□□□ 1.3
EXOSC3-201ENST00000327304 ANKRD45Q5TZF3 282 aa23.19■■□□□ 1.3
EXOSC3-201ENST00000327304 SURF6O75683 361 aaKnown RBP23.18■■□□□ 1.3
EXOSC3-201ENST00000327304 PTPN12Q05209 780 aaKnown RBP23.18■■□□□ 1.3
EXOSC3-201ENST00000327304 RIC1Q4ADV7 1423 aa23.18■■□□□ 1.3
EXOSC3-201ENST00000327304 LNPKQ9C0E8 428 aa23.17■■□□□ 1.3
EXOSC3-201ENST00000327304 APBB1O00213 710 aa23.17■■□□□ 1.3
EXOSC3-201ENST00000327304 ZBTB7AO95365 584 aa23.17■■□□□ 1.3
EXOSC3-201ENST00000327304 ITGA6P23229 1130 aa23.17■■□□□ 1.3
EXOSC3-201ENST00000327304 SF3B3Q15393 1217 aaKnown RBP23.17■■□□□ 1.3
EXOSC3-201ENST00000327304 CCDC57Q2TAC2 916 aa23.17■■□□□ 1.3
EXOSC3-201ENST00000327304 CCDC152Q4G0S7 254 aa23.17■■□□□ 1.3
EXOSC3-201ENST00000327304 ZNF594Q96JF6 807 aaPredicted RBP23.17■■□□□ 1.3
EXOSC3-201ENST00000327304 NLRP3Q96P20 1036 aa23.17■■□□□ 1.3
EXOSC3-201ENST00000327304 COPRSQ9NQ92 184 aa23.17■■□□□ 1.3
EXOSC3-201ENST00000327304 NOP58Q9Y2X3 529 aaKnown RBP23.17■■□□□ 1.3
EXOSC3-201ENST00000327304 IFIT5Q13325 482 aaKnown RBP23.16■■□□□ 1.3
EXOSC3-201ENST00000327304 SIL1Q9H173 461 aa23.16■■□□□ 1.3
EXOSC3-201ENST00000327304 RTL9Q8NET4 1388 aa23.15■■□□□ 1.3
EXOSC3-201ENST00000327304 SEC31BQ9NQW1 1179 aa23.15■■□□□ 1.3
EXOSC3-201ENST00000327304 ANKRD31Q8N7Z5 1873 aa23.15■■□□□ 1.3
EXOSC3-201ENST00000327304 ANKRD18BA2A2Z9 1011 aa23.14■■□□□ 1.29
EXOSC3-201ENST00000327304 COL4A1P02462 1669 aa23.14■■□□□ 1.29
EXOSC3-201ENST00000327304 TAF7LQ5H9L4 462 aa23.12■■□□□ 1.29
EXOSC3-201ENST00000327304 MTFR1LQ9H019 292 aa23.12■■□□□ 1.29
EXOSC3-201ENST00000327304 ATF5Q9Y2D1 282 aaPredicted RBP23.12■■□□□ 1.29
EXOSC3-201ENST00000327304 SMARCA5O60264 1052 aaPredicted RBP23.12■■□□□ 1.29
EXOSC3-201ENST00000327304 OS9Q13438 667 aaPredicted RBP23.12■■□□□ 1.29
EXOSC3-201ENST00000327304 G3BP1Q13283 466 aaKnown RBP eCLIP23.11■■□□□ 1.29
EXOSC3-201ENST00000327304 HSP90AB4PQ58FF6 505 aa23.11■■□□□ 1.29
EXOSC3-201ENST00000327304 BRIP1Q9BX63 1249 aa23.11■■□□□ 1.29
EXOSC3-201ENST00000327304 PUS3Q9BZE2 481 aaKnown RBP23.11■■□□□ 1.29
EXOSC3-201ENST00000327304 LRP5O75197 1615 aa23.11■■□□□ 1.29
EXOSC3-201ENST00000327304 RAB11FIP3O75154 756 aa23.1■■□□□ 1.29
EXOSC3-201ENST00000327304 LRRC24Q50LG9 513 aa23.1■■□□□ 1.29
EXOSC3-201ENST00000327304 ZBTB47Q9UFB7 747 aaPredicted RBP23.1■■□□□ 1.29
EXOSC3-201ENST00000327304 TAF1P21675 1872 aa23.1■■□□□ 1.29
EXOSC3-201ENST00000327304 CRY2Q49AN0 593 aa23.1■■□□□ 1.29
EXOSC3-201ENST00000327304 ATG9AQ7Z3C6 839 aa23.1■■□□□ 1.29
EXOSC3-201ENST00000327304 EYA2O00167 538 aa23.09■■□□□ 1.29
EXOSC3-201ENST00000327304 SASH1O94885 1247 aa23.09■■□□□ 1.29
EXOSC3-201ENST00000327304 RHPN1Q8TCX5 695 aa23.09■■□□□ 1.29
EXOSC3-201ENST00000327304 LRRCC1Q9C099 1032 aa23.09■■□□□ 1.29
EXOSC3-201ENST00000327304 BCL11AQ9H165 835 aa23.09■■□□□ 1.29
EXOSC3-201ENST00000327304 KLRG2A4D1S0 409 aaPredicted RBP23.08■■□□□ 1.29
EXOSC3-201ENST00000327304 SPEF2Q9C093 1822 aa23.08■■□□□ 1.29
EXOSC3-201ENST00000327304 ERC1Q8IUD2 1116 aa23.08■■□□□ 1.28
EXOSC3-201ENST00000327304 KIF1BPQ96EK5 621 aa23.08■■□□□ 1.28
EXOSC3-201ENST00000327304 IL1RAPL2Q9NP60 686 aa23.08■■□□□ 1.28
EXOSC3-201ENST00000327304 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.08■■□□□ 1.28
EXOSC3-201ENST00000327304 CIAO1O76071 339 aa23.07■■□□□ 1.28
EXOSC3-201ENST00000327304 BMP2KLQ5H9B9 411 aa23.07■■□□□ 1.28
EXOSC3-201ENST00000327304 LDHAL6AQ6ZMR3 332 aa23.07■■□□□ 1.28
EXOSC3-201ENST00000327304 DDX46Q7L014 1031 aaKnown RBP23.07■■□□□ 1.28
EXOSC3-201ENST00000327304 CELF1Q92879 486 aaKnown RBP23.07■■□□□ 1.28
EXOSC3-201ENST00000327304 IPO9Q96P70 1041 aaKnown RBP23.07■■□□□ 1.28
EXOSC3-201ENST00000327304 CDC5LQ99459 802 aaKnown RBP23.07■■□□□ 1.28
EXOSC3-201ENST00000327304 COL11A2P13942 1736 aaPredicted RBP23.07■■□□□ 1.28
EXOSC3-201ENST00000327304 RPGRQ92834 1020 aaKnown RBP23.06■■□□□ 1.28
EXOSC3-201ENST00000327304 C10orf71Q711Q0 1435 aa23.06■■□□□ 1.28
EXOSC3-201ENST00000327304 IL15P40933 162 aaPredicted RBP23.05■■□□□ 1.28
EXOSC3-201ENST00000327304 FBXO3Q9UK99 471 aa23.05■■□□□ 1.28
EXOSC3-201ENST00000327304 POLD1P28340 1107 aa23.05■■□□□ 1.28
EXOSC3-201ENST00000327304 PDE6BP35913 854 aa23.05■■□□□ 1.28
EXOSC3-201ENST00000327304 IGHMBP2P38935 993 aaKnown RBP23.05■■□□□ 1.28
EXOSC3-201ENST00000327304 TFCP2Q12800 502 aa23.05■■□□□ 1.28
EXOSC3-201ENST00000327304 ANKRD18AQ8IVF6 992 aa23.05■■□□□ 1.28
EXOSC3-201ENST00000327304 CNNM1Q9NRU3 951 aa23.05■■□□□ 1.28
EXOSC3-201ENST00000327304 RIPOR2Q9Y4F9 1068 aa23.05■■□□□ 1.28
EXOSC3-201ENST00000327304 C16orf71Q8IYS4 520 aaPredicted RBP23.04■■□□□ 1.28
EXOSC3-201ENST00000327304 MPHOSPH8Q99549 860 aa23.04■■□□□ 1.28
EXOSC3-201ENST00000327304 SGIP1Q9BQI5 828 aa23.03■■□□□ 1.28
EXOSC3-201ENST00000327304 HOXA10P31260 410 aaPredicted RBP23.03■■□□□ 1.28
EXOSC3-201ENST00000327304 RPS8P62241 208 aaKnown RBP23.03■■□□□ 1.28
EXOSC3-201ENST00000327304 PLEKHM2Q8IWE5 1019 aa23.03■■□□□ 1.28
EXOSC3-201ENST00000327304 OTUD7AQ8TE49 926 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms