RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 PODXL2Q9NZ53 605 aa14.42□□□□□ -0.1
FN1-201ENST00000323926 CROCC2H7BZ55 1655 aa14.42□□□□□ -0.1
FN1-201ENST00000323926 KIF4BQ2VIQ3 1234 aa14.42□□□□□ -0.1
FN1-201ENST00000323926 GIMAP7Q8NHV1 300 aa14.42□□□□□ -0.1
FN1-201ENST00000323926 KAT14Q9H8E8 782 aa14.42□□□□□ -0.1
FN1-201ENST00000323926 TBCAO75347 108 aaKnown RBP14.42□□□□□ -0.1
FN1-201ENST00000323926 KCNG1Q9UIX4 513 aa14.42□□□□□ -0.1
FN1-201ENST00000323926 TMEM57Q8N5G2 664 aa14.42□□□□□ -0.1
FN1-201ENST00000323926 ESR2Q92731 530 aa14.42□□□□□ -0.1
FN1-201ENST00000323926 NAP1L3Q99457 506 aaPredicted RBP14.42□□□□□ -0.1
FN1-201ENST00000323926 HS1BP3Q53T59 392 aa14.42□□□□□ -0.1
FN1-201ENST00000323926 CCDC77Q9BR77 488 aa14.42□□□□□ -0.1
FN1-201ENST00000323926 IFIT3O14879 490 aaKnown RBP14.42□□□□□ -0.1
FN1-201ENST00000323926 TUBB2AQ13885 445 aa14.42□□□□□ -0.1
FN1-201ENST00000323926 SYCP3Q8IZU3 236 aa14.42□□□□□ -0.1
FN1-201ENST00000323926 HOOK2Q96ED9 719 aa14.42□□□□□ -0.1
FN1-201ENST00000323926 TUBB2BQ9BVA1 445 aa14.42□□□□□ -0.1
FN1-201ENST00000323926 CCDC96Q2M329 555 aa14.41□□□□□ -0.1
FN1-201ENST00000323926 NLRP5P59047 1200 aa14.41□□□□□ -0.1
FN1-201ENST00000323926 TSR2Q969E8 191 aaKnown RBP14.41□□□□□ -0.1
FN1-201ENST00000323926 TMOD4Q9NZQ9 345 aa14.41□□□□□ -0.1
FN1-201ENST00000323926 ATP2A2P16615 1042 aaKnown RBP14.41□□□□□ -0.1
FN1-201ENST00000323926 TTC41PQ6P2S7 1318 aa14.41□□□□□ -0.1
FN1-201ENST00000323926 BABAM1Q9NWV8 329 aa14.41□□□□□ -0.1
FN1-201ENST00000323926 SNRPA1P09661 255 aaKnown RBP14.4□□□□□ -0.1
FN1-201ENST00000323926 IARSP41252 1262 aaKnown RBP14.4□□□□□ -0.1
FN1-201ENST00000323926 HDAC1Q13547 482 aaPredicted RBP14.4□□□□□ -0.1
FN1-201ENST00000323926 SPECC1Q5M775 1068 aa14.4□□□□□ -0.1
FN1-201ENST00000323926 IFNL2Q8IZJ0 200 aa14.4□□□□□ -0.1
FN1-201ENST00000323926 KIAA0753Q2KHM9 967 aa14.4□□□□□ -0.1
FN1-201ENST00000323926 A2MP01023 1474 aa14.4□□□□□ -0.1
FN1-201ENST00000323926 GAS8O95995 478 aa14.4□□□□□ -0.1
FN1-201ENST00000323926 MTIF2P46199 727 aaKnown RBP14.4□□□□□ -0.1
FN1-201ENST00000323926 RARSP54136 660 aaKnown RBP14.4□□□□□ -0.1
FN1-201ENST00000323926 SYCP2Q9BX26 1530 aa14.4□□□□□ -0.1
FN1-201ENST00000323926 EXOC5O00471 708 aa14.4□□□□□ -0.1
FN1-201ENST00000323926 SLU7O95391 586 aaKnown RBP14.4□□□□□ -0.1
FN1-201ENST00000323926 IQCDQ96DY2 449 aa14.4□□□□□ -0.1
FN1-201ENST00000323926 MINDY4BA8MYZ0 360 aa14.39□□□□□ -0.11
FN1-201ENST00000323926 OGFOD1Q8N543 542 aa14.39□□□□□ -0.11
FN1-201ENST00000323926 C1orf115Q9H7X2 142 aa14.39□□□□□ -0.11
FN1-201ENST00000323926 METAP2P50579 478 aaKnown RBP eCLIP14.39□□□□□ -0.11
FN1-201ENST00000323926 BCAR3O75815 825 aa14.39□□□□□ -0.11
FN1-201ENST00000323926 CTR9Q6PD62 1173 aa14.39□□□□□ -0.11
FN1-201ENST00000323926 CROCCP2Q86T23 111 aa14.39□□□□□ -0.11
FN1-201ENST00000323926 GNA11P29992 359 aa14.39□□□□□ -0.11
FN1-201ENST00000323926 WDR78Q5VTH9 848 aa14.39□□□□□ -0.11
FN1-201ENST00000323926 NPHP3Q7Z494 1330 aa14.39□□□□□ -0.11
FN1-201ENST00000323926 WDR7Q9Y4E6 1490 aa14.39□□□□□ -0.11
FN1-201ENST00000323926 KRT83P78385 493 aa14.39□□□□□ -0.11
FN1-201ENST00000323926 TMEM67Q5HYA8 995 aa14.39□□□□□ -0.11
FN1-201ENST00000323926 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.39□□□□□ -0.11
FN1-201ENST00000323926 PSMA7O14818 248 aa14.38□□□□□ -0.11
FN1-201ENST00000323926 ATP5DP30049 168 aa14.38□□□□□ -0.11
FN1-201ENST00000323926 HOXA7P31268 230 aaPredicted RBP14.38□□□□□ -0.11
FN1-201ENST00000323926 CSRNP2Q9H175 543 aa14.38□□□□□ -0.11
FN1-201ENST00000323926 SH2D4AQ9H788 454 aa14.38□□□□□ -0.11
FN1-201ENST00000323926 IQCGQ9H095 443 aaKnown RBP14.38□□□□□ -0.11
FN1-201ENST00000323926 SWAP70Q9UH65 585 aa14.38□□□□□ -0.11
FN1-201ENST00000323926 USH1CQ9Y6N9 552 aa14.38□□□□□ -0.11
FN1-201ENST00000323926 SYCE3A1L190 88 aa14.38□□□□□ -0.11
FN1-201ENST00000323926 STK11IPQ8N1F8 1099 aa14.38□□□□□ -0.11
FN1-201ENST00000323926 TRMT112Q9UI30 125 aaKnown RBP14.38□□□□□ -0.11
FN1-201ENST00000323926 WDR62O43379 1518 aa14.38□□□□□ -0.11
FN1-201ENST00000323926 RANBP6O60518 1105 aaKnown RBP14.38□□□□□ -0.11
FN1-201ENST00000323926 HSF2BPO75031 334 aa14.38□□□□□ -0.11
FN1-201ENST00000323926 VIMP08670 466 aaKnown RBP14.38□□□□□ -0.11
FN1-201ENST00000323926 FLIIQ13045 1269 aa14.38□□□□□ -0.11
FN1-201ENST00000323926 RBM28Q9NW13 759 aaKnown RBP14.38□□□□□ -0.11
FN1-201ENST00000323926 ZNF804AQ7Z570 1209 aa14.37□□□□□ -0.11
FN1-201ENST00000323926 CTAGE9A4FU28 777 aa14.37□□□□□ -0.11
FN1-201ENST00000323926 ALDH3A1P30838 453 aa14.37□□□□□ -0.11
FN1-201ENST00000323926 C6orf50Q9HD87 102 aa14.37□□□□□ -0.11
FN1-201ENST00000323926 FBXO3Q9UK99 471 aa14.37□□□□□ -0.11
FN1-201ENST00000323926 KRT13P13646 458 aa14.37□□□□□ -0.11
FN1-201ENST00000323926 TNPO1Q92973 898 aaKnown RBP14.37□□□□□ -0.11
FN1-201ENST00000323926 OPA1O60313 960 aa14.37□□□□□ -0.11
FN1-201ENST00000323926 ZNF710Q8N1W2 664 aa14.37□□□□□ -0.11
FN1-201ENST00000323926 TRAPPC8Q9Y2L5 1435 aa14.37□□□□□ -0.11
FN1-201ENST00000323926 PPP2R5BQ15173 497 aa14.37□□□□□ -0.11
FN1-201ENST00000323926 TDRD12Q587J7 1177 aaKnown RBP14.37□□□□□ -0.11
FN1-201ENST00000323926 GOLGA8AA7E2F4 631 aa14.37□□□□□ -0.11
FN1-201ENST00000323926 ARFGAP3Q9NP61 516 aa14.37□□□□□ -0.11
FN1-201ENST00000323926 BRAPQ7Z569 592 aa14.36□□□□□ -0.11
FN1-201ENST00000323926 CCDC110Q8TBZ0 833 aa14.36□□□□□ -0.11
FN1-201ENST00000323926 CCDC40Q4G0X9 1142 aa14.36□□□□□ -0.11
FN1-201ENST00000323926 BMS1Q14692 1282 aaKnown RBP14.36□□□□□ -0.11
FN1-201ENST00000323926 PPP1R1BQ9UD71 204 aaPredicted RBP14.36□□□□□ -0.11
FN1-201ENST00000323926 LRSAM1Q6UWE0 723 aa14.36□□□□□ -0.11
FN1-201ENST00000323926 TNRQ92752 1358 aa14.36□□□□□ -0.11
FN1-201ENST00000323926 FAM177A1Q8N128 213 aaPredicted RBP14.36□□□□□ -0.11
FN1-201ENST00000323926 ALDH1L1O75891 902 aa14.36□□□□□ -0.11
FN1-201ENST00000323926 SYNCQ9H7C4 482 aa14.36□□□□□ -0.11
FN1-201ENST00000323926 KRT86O43790 486 aa14.35□□□□□ -0.11
FN1-201ENST00000323926 CDCA7Q9BWT1 371 aaPredicted RBP14.35□□□□□ -0.11
FN1-201ENST00000323926 SPHKAPQ2M3C7 1700 aa14.35□□□□□ -0.11
FN1-201ENST00000323926 TSPY2A6NKD2 308 aa14.35□□□□□ -0.11
FN1-201ENST00000323926 STAT6P42226 847 aa14.35□□□□□ -0.11
FN1-201ENST00000323926 KLHL40Q2TBA0 621 aa14.35□□□□□ -0.11
FN1-201ENST00000323926 NBPF1Q3BBV0 1214 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms