RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 ELF2Q15723 593 aa21.04■□□□□ 0.96
PRKCB-202ENST00000321728 IFFO2Q5TF58 517 aa21.04■□□□□ 0.96
PRKCB-202ENST00000321728 PTPRUQ92729 1446 aa21.04■□□□□ 0.96
PRKCB-202ENST00000321728 CCDC69A6NI79 296 aa21.04■□□□□ 0.96
PRKCB-202ENST00000321728 HIP1O00291 1037 aa21.04■□□□□ 0.96
PRKCB-202ENST00000321728 KCNQ3O43525 872 aa21.04■□□□□ 0.96
PRKCB-202ENST00000321728 BBXQ8WY36 941 aaPredicted RBP21.04■□□□□ 0.96
PRKCB-202ENST00000321728 MRFAP1L1Q96HT8 127 aa21.04■□□□□ 0.96
PRKCB-202ENST00000321728 BABAM1Q9NWV8 329 aa21.04■□□□□ 0.96
PRKCB-202ENST00000321728 NPHP1O15259 732 aa21.03■□□□□ 0.96
PRKCB-202ENST00000321728 SARM1Q6SZW1 724 aa21.03■□□□□ 0.96
PRKCB-202ENST00000321728 NYAP1Q6ZVC0 841 aa21.03■□□□□ 0.96
PRKCB-202ENST00000321728 C9orf78Q9NZ63 289 aaPredicted RBP21.03■□□□□ 0.96
PRKCB-202ENST00000321728 LRRC37A3O60309 1634 aa21.03■□□□□ 0.96
PRKCB-202ENST00000321728 A0A0D9SFI3 127 aa21.03■□□□□ 0.96
PRKCB-202ENST00000321728 FBXO38Q6PIJ6 1188 aa21.03■□□□□ 0.96
PRKCB-202ENST00000321728 ERC1Q8IUD2 1116 aa21.03■□□□□ 0.96
PRKCB-202ENST00000321728 FSD1Q9BTV5 496 aa21.03■□□□□ 0.96
PRKCB-202ENST00000321728 ADGRL3Q9HAR2 1447 aa21.03■□□□□ 0.96
PRKCB-202ENST00000321728 BRF1Q92994 677 aa21.02■□□□□ 0.96
PRKCB-202ENST00000321728 ERO1AQ96HE7 468 aa21.02■□□□□ 0.96
PRKCB-202ENST00000321728 RGPD8O14715 1765 aaPredicted RBP21.02■□□□□ 0.96
PRKCB-202ENST00000321728 DIP2BQ9P265 1576 aa21.02■□□□□ 0.96
PRKCB-202ENST00000321728 STX1AQ16623 288 aa21.02■□□□□ 0.96
PRKCB-202ENST00000321728 CHD2O14647 1828 aaKnown RBP21.02■□□□□ 0.95
PRKCB-202ENST00000321728 CCDC8Q9H0W5 538 aaPredicted RBP21.01■□□□□ 0.95
PRKCB-202ENST00000321728 CFAP45Q9UL16 551 aa21.01■□□□□ 0.95
PRKCB-202ENST00000321728 HOXC9P31274 260 aa21.01■□□□□ 0.95
PRKCB-202ENST00000321728 FGD1P98174 961 aa21.01■□□□□ 0.95
PRKCB-202ENST00000321728 CCDC66A2RUB6 948 aa21.01■□□□□ 0.95
PRKCB-202ENST00000321728 RESTQ13127 1097 aa21.01■□□□□ 0.95
PRKCB-202ENST00000321728 LGR6Q9HBX8 967 aa21.01■□□□□ 0.95
PRKCB-202ENST00000321728 AGLP35573 1532 aa21■□□□□ 0.95
PRKCB-202ENST00000321728 A0A087WWV3 80 aa21■□□□□ 0.95
PRKCB-202ENST00000321728 CCAR2Q8N163 923 aaKnown RBP21■□□□□ 0.95
PRKCB-202ENST00000321728 BOLA2Q9H3K6 86 aa21■□□□□ 0.95
PRKCB-202ENST00000321728 SLU7O95391 586 aaKnown RBP21■□□□□ 0.95
PRKCB-202ENST00000321728 HSP90B1P14625 803 aaKnown RBP21■□□□□ 0.95
PRKCB-202ENST00000321728 MTX1Q13505 466 aa21■□□□□ 0.95
PRKCB-202ENST00000321728 ABTB2Q8N961 1025 aa21■□□□□ 0.95
PRKCB-202ENST00000321728 ERICH4A6NGS2 130 aa20.99■□□□□ 0.95
PRKCB-202ENST00000321728 CCZ1BP86790 482 aa20.99■□□□□ 0.95
PRKCB-202ENST00000321728 CCZ1P86791 482 aaPredicted RBP20.99■□□□□ 0.95
PRKCB-202ENST00000321728 CCAR1Q8IX12 1150 aaKnown RBP20.99■□□□□ 0.95
PRKCB-202ENST00000321728 GIGYF1O75420 1035 aaPredicted RBP20.99■□□□□ 0.95
PRKCB-202ENST00000321728 FBXW7Q969H0 707 aa20.99■□□□□ 0.95
PRKCB-202ENST00000321728 ZBTB22O15209 634 aa20.98■□□□□ 0.95
PRKCB-202ENST00000321728 FOSBP53539 338 aa20.98■□□□□ 0.95
PRKCB-202ENST00000321728 EIF4A1P60842 406 aaKnown RBP20.98■□□□□ 0.95
PRKCB-202ENST00000321728 GTF3C6Q969F1 213 aa20.98■□□□□ 0.95
PRKCB-202ENST00000321728 EAF2Q96CJ1 260 aaPredicted RBP20.98■□□□□ 0.95
PRKCB-202ENST00000321728 ALDH8A1Q9H2A2 487 aaPredicted RBP20.98■□□□□ 0.95
PRKCB-202ENST00000321728 NPHP4O75161 1426 aaPredicted RBP20.98■□□□□ 0.95
PRKCB-202ENST00000321728 CTAGE5O15320 804 aa20.98■□□□□ 0.95
PRKCB-202ENST00000321728 ZSCAN16Q9H4T2 348 aaPredicted RBP20.98■□□□□ 0.95
PRKCB-202ENST00000321728 ZNF589Q86UQ0 364 aaPredicted RBP20.97■□□□□ 0.95
PRKCB-202ENST00000321728 ST7Q9NRC1 585 aa20.97■□□□□ 0.95
PRKCB-202ENST00000321728 G3BP1Q13283 466 aaKnown RBP eCLIP20.97■□□□□ 0.95
PRKCB-202ENST00000321728 CCDC73Q6ZRK6 1079 aa20.97■□□□□ 0.95
PRKCB-202ENST00000321728 TLR7Q9NYK1 1049 aaKnown RBP20.97■□□□□ 0.95
PRKCB-202ENST00000321728 HMG20BQ9P0W2 317 aa20.97■□□□□ 0.95
PRKCB-202ENST00000321728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.97■□□□□ 0.95
PRKCB-202ENST00000321728 ADCY9O60503 1353 aa20.96■□□□□ 0.95
PRKCB-202ENST00000321728 KINO60870 393 aaKnown RBP20.96■□□□□ 0.95
PRKCB-202ENST00000321728 TOPAZ1Q8N9V7 1692 aa20.96■□□□□ 0.95
PRKCB-202ENST00000321728 DHX40Q8IX18 779 aaKnown RBP20.96■□□□□ 0.95
PRKCB-202ENST00000321728 FTOQ9C0B1 505 aaKnown RBP eCLIP20.96■□□□□ 0.955e-6■■■□□ 14.7
PRKCB-202ENST00000321728 TMEM51Q9NW97 253 aa20.96■□□□□ 0.95
PRKCB-202ENST00000321728 MAP3K2Q9Y2U5 619 aa20.96■□□□□ 0.95
PRKCB-202ENST00000321728 GTF2E1P29083 439 aaPredicted RBP20.95■□□□□ 0.94
PRKCB-202ENST00000321728 SLFNL1Q499Z3 407 aa20.95■□□□□ 0.94
PRKCB-202ENST00000321728 ANO10Q9NW15 660 aa20.95■□□□□ 0.94
PRKCB-202ENST00000321728 SASH1O94885 1247 aa20.95■□□□□ 0.94
PRKCB-202ENST00000321728 AOPEPQ8N6M6 819 aa20.95■□□□□ 0.94
PRKCB-202ENST00000321728 SIL1Q9H173 461 aa20.95■□□□□ 0.94
PRKCB-202ENST00000321728 GOLPH3LQ9H4A5 285 aa20.95■□□□□ 0.94
PRKCB-202ENST00000321728 FAM53CQ9NYF3 392 aa20.95■□□□□ 0.94
PRKCB-202ENST00000321728 KIF2AO00139 706 aaPredicted RBP20.94■□□□□ 0.94
PRKCB-202ENST00000321728 SNW1Q13573 536 aaKnown RBP20.94■□□□□ 0.94
PRKCB-202ENST00000321728 CWF19L2Q2TBE0 894 aaKnown RBP20.94■□□□□ 0.94
PRKCB-202ENST00000321728 Q6ZUG5 572 aa20.94■□□□□ 0.94
PRKCB-202ENST00000321728 ERCC4Q92889 916 aaPredicted RBP20.94■□□□□ 0.94
PRKCB-202ENST00000321728 SNRKQ9NRH2 765 aa20.94■□□□□ 0.94
PRKCB-202ENST00000321728 CEP57L1Q8IYX8 460 aa20.94■□□□□ 0.94
PRKCB-202ENST00000321728 NEK1Q96PY6 1258 aa20.94■□□□□ 0.94
PRKCB-202ENST00000321728 ZNF446Q9NWS9 450 aa20.94■□□□□ 0.94
PRKCB-202ENST00000321728 ERCC6LQ2NKX8 1250 aa20.93■□□□□ 0.94
PRKCB-202ENST00000321728 MPRIPQ6WCQ1 1025 aa20.93■□□□□ 0.94
PRKCB-202ENST00000321728 LRRC59Q96AG4 307 aaKnown RBP20.93■□□□□ 0.94
PRKCB-202ENST00000321728 SYTL4Q96C24 671 aaPredicted RBP20.93■□□□□ 0.94
PRKCB-202ENST00000321728 CHMP4AQ9BY43 222 aa20.93■□□□□ 0.94
PRKCB-202ENST00000321728 UBR1Q8IWV7 1749 aa20.93■□□□□ 0.94
PRKCB-202ENST00000321728 MED23Q9ULK4 1368 aa20.93■□□□□ 0.94
PRKCB-202ENST00000321728 PRAMEF22A3QJZ6 481 aa20.93■□□□□ 0.94
PRKCB-202ENST00000321728 GSDMDP57764 484 aa20.93■□□□□ 0.94
PRKCB-202ENST00000321728 KRT32Q14532 448 aa20.93■□□□□ 0.94
PRKCB-202ENST00000321728 TIGD1Q96MW7 591 aa20.93■□□□□ 0.94
PRKCB-202ENST00000321728 ERBB3P21860 1342 aa20.93■□□□□ 0.94
PRKCB-202ENST00000321728 TAF5LO75529 589 aa20.92■□□□□ 0.94
PRKCB-202ENST00000321728 CDK11BP21127 795 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms