RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 FGD1P98174 961 aa20.73■□□□□ 0.91
COL9A1-201ENST00000320755 CAMK4Q16566 473 aa20.73■□□□□ 0.91
COL9A1-201ENST00000320755 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.73■□□□□ 0.91
COL9A1-201ENST00000320755 HSP90B1P14625 803 aaKnown RBP20.72■□□□□ 0.91
COL9A1-201ENST00000320755 TOB2Q14106 344 aaPredicted RBP20.72■□□□□ 0.91
COL9A1-201ENST00000320755 ATP5JP18859 108 aa20.72■□□□□ 0.91
COL9A1-201ENST00000320755 TIMM10P62072 90 aa20.72■□□□□ 0.91
COL9A1-201ENST00000320755 PPFIA3O75145 1194 aa20.72■□□□□ 0.91
COL9A1-201ENST00000320755 FOSBP53539 338 aa20.72■□□□□ 0.91
COL9A1-201ENST00000320755 TTLL7Q6ZT98 887 aa20.72■□□□□ 0.91
COL9A1-201ENST00000320755 ADCY5O95622 1261 aa20.71■□□□□ 0.91
COL9A1-201ENST00000320755 CSPP1Q1MSJ5 1256 aa20.71■□□□□ 0.91
COL9A1-201ENST00000320755 DDX11Q96FC9 970 aa20.71■□□□□ 0.91
COL9A1-201ENST00000320755 ZBTB3Q9H5J0 574 aa20.71■□□□□ 0.91
COL9A1-201ENST00000320755 TMEM94Q12767 1356 aa20.71■□□□□ 0.91
COL9A1-201ENST00000320755 A1BGP04217 495 aa20.71■□□□□ 0.91
COL9A1-201ENST00000320755 TTC6Q86TZ1 520 aa20.71■□□□□ 0.91
COL9A1-201ENST00000320755 JAK2O60674 1132 aa20.7■□□□□ 0.9
COL9A1-201ENST00000320755 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.7■□□□□ 0.9
COL9A1-201ENST00000320755 MED23Q9ULK4 1368 aa20.7■□□□□ 0.9
COL9A1-201ENST00000320755 CRYBG1Q9Y4K1 1723 aa20.7■□□□□ 0.9
COL9A1-201ENST00000320755 ZNF500O60304 480 aaPredicted RBP20.7■□□□□ 0.9
COL9A1-201ENST00000320755 KRT85P78386 507 aa20.7■□□□□ 0.9
COL9A1-201ENST00000320755 HSP90AA2PQ14568 343 aaPredicted RBP20.7■□□□□ 0.9
COL9A1-201ENST00000320755 ANKRD1Q15327 319 aa20.7■□□□□ 0.9
COL9A1-201ENST00000320755 NAP1L2Q9ULW6 460 aaPredicted RBP20.7■□□□□ 0.9
COL9A1-201ENST00000320755 COL15A1P39059 1388 aa20.7■□□□□ 0.9
COL9A1-201ENST00000320755 GOLIM4O00461 696 aa20.69■□□□□ 0.9
COL9A1-201ENST00000320755 ZNF594Q96JF6 807 aaPredicted RBP20.69■□□□□ 0.9
COL9A1-201ENST00000320755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.69■□□□□ 0.9
COL9A1-201ENST00000320755 GOLGA6L4A6NEF3 574 aa20.69■□□□□ 0.9
COL9A1-201ENST00000320755 NBPF26B4DH59 902 aa20.69■□□□□ 0.9
COL9A1-201ENST00000320755 NBPF14Q5TI25 921 aa20.69■□□□□ 0.9
COL9A1-201ENST00000320755 NBPF10Q6P3W6 841 aaKnown RBP20.69■□□□□ 0.9
COL9A1-201ENST00000320755 NBPF15Q8N660 670 aa20.69■□□□□ 0.9
COL9A1-201ENST00000320755 FAM184AQ8NB25 1140 aa20.69■□□□□ 0.9
COL9A1-201ENST00000320755 NEK1Q96PY6 1258 aa20.69■□□□□ 0.9
COL9A1-201ENST00000320755 LETM1O95202 739 aaPredicted RBP20.69■□□□□ 0.9
COL9A1-201ENST00000320755 PLBD2Q8NHP8 589 aa20.69■□□□□ 0.9
COL9A1-201ENST00000320755 C5P01031 1676 aa20.69■□□□□ 0.9
COL9A1-201ENST00000320755 Q6ZUG5 572 aa20.68■□□□□ 0.9
COL9A1-201ENST00000320755 PDCP20941 246 aa20.68■□□□□ 0.9
COL9A1-201ENST00000320755 CCDC85AQ96PX6 553 aaPredicted RBP20.68■□□□□ 0.9
COL9A1-201ENST00000320755 TTC12Q9H892 705 aaPredicted RBP20.68■□□□□ 0.9
COL9A1-201ENST00000320755 LIG1P18858 919 aa20.67■□□□□ 0.9
COL9A1-201ENST00000320755 TOM1L2Q6ZVM7 507 aa20.67■□□□□ 0.9
COL9A1-201ENST00000320755 SIPA1L3O60292 1781 aaPredicted RBP20.67■□□□□ 0.9
COL9A1-201ENST00000320755 CYP21A2P08686 494 aa20.67■□□□□ 0.9
COL9A1-201ENST00000320755 HMG20BQ9P0W2 317 aa20.67■□□□□ 0.9
COL9A1-201ENST00000320755 TRPM3Q9HCF6 1732 aaPredicted RBP20.67■□□□□ 0.9
COL9A1-201ENST00000320755 RBM10P98175 930 aaKnown RBP20.67■□□□□ 0.9
COL9A1-201ENST00000320755 RABL6Q3YEC7 729 aaPredicted RBP20.67■□□□□ 0.9
COL9A1-201ENST00000320755 MCMDC2Q4G0Z9 681 aa20.67■□□□□ 0.9
COL9A1-201ENST00000320755 CKAP2LQ8IYA6 745 aa20.67■□□□□ 0.9
COL9A1-201ENST00000320755 SNRKQ9NRH2 765 aa20.67■□□□□ 0.9
COL9A1-201ENST00000320755 CEBPZQ03701 1054 aaKnown RBP20.66■□□□□ 0.9
COL9A1-201ENST00000320755 DNTTIP2Q5QJE6 756 aaKnown RBP20.66■□□□□ 0.9
COL9A1-201ENST00000320755 C17orf53Q8N3J3 647 aaPredicted RBP20.66■□□□□ 0.9
COL9A1-201ENST00000320755 BRF1Q92994 677 aa20.66■□□□□ 0.9
COL9A1-201ENST00000320755 TPM2P07951 284 aa20.66■□□□□ 0.9
COL9A1-201ENST00000320755 ZNF609O15014 1411 aa20.65■□□□□ 0.9
COL9A1-201ENST00000320755 SPATA32Q96LK8 384 aa20.65■□□□□ 0.9
COL9A1-201ENST00000320755 HAUS7Q99871 368 aa20.65■□□□□ 0.9
COL9A1-201ENST00000320755 ZNF142P52746 1687 aaPredicted RBP20.65■□□□□ 0.9
COL9A1-201ENST00000320755 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.65■□□□□ 0.9
COL9A1-201ENST00000320755 UVSSAQ2YD98 709 aa20.65■□□□□ 0.9
COL9A1-201ENST00000320755 LRRC24Q50LG9 513 aa20.65■□□□□ 0.9
COL9A1-201ENST00000320755 PRDM11Q9NQV5 511 aa20.65■□□□□ 0.9
COL9A1-201ENST00000320755 H3BQV1 296 aa20.64■□□□□ 0.89
COL9A1-201ENST00000320755 FOXO4P98177 505 aa20.64■□□□□ 0.89
COL9A1-201ENST00000320755 IFFO2Q5TF58 517 aa20.64■□□□□ 0.89
COL9A1-201ENST00000320755 A0A0G2JLW4 131 aa20.64■□□□□ 0.89
COL9A1-201ENST00000320755 CASP7P55210 303 aa20.64■□□□□ 0.89
COL9A1-201ENST00000320755 KRT32Q14532 448 aa20.64■□□□□ 0.89
COL9A1-201ENST00000320755 SPC24Q8NBT2 197 aa20.64■□□□□ 0.89
COL9A1-201ENST00000320755 CWC25Q9NXE8 425 aaPredicted RBP20.64■□□□□ 0.89
COL9A1-201ENST00000320755 DACT1Q9NYF0 836 aa20.64■□□□□ 0.89
COL9A1-201ENST00000320755 KDM4AO75164 1064 aa20.63■□□□□ 0.89
COL9A1-201ENST00000320755 MCM5P33992 734 aa20.63■□□□□ 0.89
COL9A1-201ENST00000320755 CHST3Q7LGC8 479 aa20.63■□□□□ 0.89
COL9A1-201ENST00000320755 U3KPZ7 1027 aaPredicted RBP20.63■□□□□ 0.89
COL9A1-201ENST00000320755 KIAA2012Q0VF49 1180 aa20.63■□□□□ 0.89
COL9A1-201ENST00000320755 SCN11AQ9UI33 1791 aa20.63■□□□□ 0.89
COL9A1-201ENST00000320755 USPL1Q5W0Q7 1092 aa20.62■□□□□ 0.89
COL9A1-201ENST00000320755 KBTBD3Q8NAB2 608 aa20.62■□□□□ 0.89
COL9A1-201ENST00000320755 ZCRB1Q8TBF4 217 aaKnown RBP20.62■□□□□ 0.89
COL9A1-201ENST00000320755 PUS3Q9BZE2 481 aaKnown RBP20.62■□□□□ 0.89
COL9A1-201ENST00000320755 NUP62CLQ9H1M0 184 aa20.62■□□□□ 0.89
COL9A1-201ENST00000320755 PAG1Q9NWQ8 432 aa20.62■□□□□ 0.89
COL9A1-201ENST00000320755 MST1RQ04912 1400 aa20.62■□□□□ 0.89
COL9A1-201ENST00000320755 CCT2P78371 535 aaKnown RBP20.62■□□□□ 0.89
COL9A1-201ENST00000320755 ATG9AQ7Z3C6 839 aa20.62■□□□□ 0.89
COL9A1-201ENST00000320755 STRN4Q9NRL3 753 aa20.62■□□□□ 0.89
COL9A1-201ENST00000320755 CCDC192P0DO97 292 aa20.62■□□□□ 0.89
COL9A1-201ENST00000320755 STOX1Q6ZVD7 989 aa20.62■□□□□ 0.89
COL9A1-201ENST00000320755 FUCA2Q9BTY2 467 aa20.62■□□□□ 0.89
COL9A1-201ENST00000320755 H7C1W4 665 aa20.61■□□□□ 0.89
COL9A1-201ENST00000320755 AP5Z1O43299 807 aa20.61■□□□□ 0.89
COL9A1-201ENST00000320755 FKBP4Q02790 459 aaKnown RBP eCLIP20.61■□□□□ 0.89
COL9A1-201ENST00000320755 CADPS2Q86UW7 1296 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms