RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 UBN2Q6ZU65 1347 aa12.45□□□□□ -0.42
GINS3-201ENST00000318129 EZH2Q15910 746 aaKnown RBP12.45□□□□□ -0.42
GINS3-201ENST00000318129 HSP90AB4PQ58FF6 505 aa12.45□□□□□ -0.42
GINS3-201ENST00000318129 JARID2Q92833 1246 aaPredicted RBP12.45□□□□□ -0.42
GINS3-201ENST00000318129 SETDB2Q96T68 719 aa12.45□□□□□ -0.42
GINS3-201ENST00000318129 TBC1D2Q9BYX2 928 aa12.45□□□□□ -0.42
GINS3-201ENST00000318129 SRP68Q9UHB9 627 aaKnown RBP12.45□□□□□ -0.42
GINS3-201ENST00000318129 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
GINS3-201ENST00000318129 RAB11FIP3O75154 756 aa12.44□□□□□ -0.42
GINS3-201ENST00000318129 FOXO4P98177 505 aa12.44□□□□□ -0.42
GINS3-201ENST00000318129 NUCB1Q02818 461 aa12.44□□□□□ -0.42
GINS3-201ENST00000318129 SUSD4Q5VX71 490 aa12.44□□□□□ -0.42
GINS3-201ENST00000318129 AMIGO3Q86WK7 504 aa12.44□□□□□ -0.42
GINS3-201ENST00000318129 FAM89AQ96GI7 184 aa12.44□□□□□ -0.42
GINS3-201ENST00000318129 NYXQ9GZU5 481 aa12.44□□□□□ -0.42
GINS3-201ENST00000318129 SH3TC1Q8TE82 1336 aa12.44□□□□□ -0.42
GINS3-201ENST00000318129 FGD1P98174 961 aa12.44□□□□□ -0.42
GINS3-201ENST00000318129 EPHA10Q5JZY3 1008 aa12.44□□□□□ -0.42
GINS3-201ENST00000318129 SMIM5Q71RC9 77 aa12.44□□□□□ -0.42
GINS3-201ENST00000318129 C4AP0C0L4 1744 aa12.44□□□□□ -0.42
GINS3-201ENST00000318129 IRS4O14654 1257 aaPredicted RBP12.43□□□□□ -0.42
GINS3-201ENST00000318129 ZNF827Q17R98 1081 aa12.43□□□□□ -0.42
GINS3-201ENST00000318129 ANKRD45Q5TZF3 282 aa12.43□□□□□ -0.42
GINS3-201ENST00000318129 TBC1D9BQ66K14 1250 aa12.43□□□□□ -0.42
GINS3-201ENST00000318129 KIAA1211Q6ZU35 1233 aa12.43□□□□□ -0.42
GINS3-201ENST00000318129 STK32BQ9NY57 414 aa12.43□□□□□ -0.42
GINS3-201ENST00000318129 PDE8AO60658 829 aa12.42□□□□□ -0.42
GINS3-201ENST00000318129 LMBR1LQ6UX01 489 aa12.42□□□□□ -0.42
GINS3-201ENST00000318129 SURF6O75683 361 aaKnown RBP12.42□□□□□ -0.42
GINS3-201ENST00000318129 NTSR2O95665 410 aa12.42□□□□□ -0.42
GINS3-201ENST00000318129 CHD1LQ86WJ1 897 aa12.42□□□□□ -0.42
GINS3-201ENST00000318129 TRIM44Q96DX7 344 aaPredicted RBP12.42□□□□□ -0.42
GINS3-201ENST00000318129 CSF1RP07333 972 aa12.41□□□□□ -0.42
GINS3-201ENST00000318129 TPTE2Q6XPS3 522 aa12.41□□□□□ -0.42
GINS3-201ENST00000318129 BICDL1Q6ZP65 573 aa12.41□□□□□ -0.42
GINS3-201ENST00000318129 ERC1Q8IUD2 1116 aa12.41□□□□□ -0.42
GINS3-201ENST00000318129 TBC1D32Q96NH3 1257 aa12.41□□□□□ -0.42
GINS3-201ENST00000318129 GYS1P13807 737 aa12.41□□□□□ -0.42
GINS3-201ENST00000318129 G3BP1Q13283 466 aaKnown RBP eCLIP12.41□□□□□ -0.42
GINS3-201ENST00000318129 SLC15A2Q16348 729 aa12.41□□□□□ -0.42
GINS3-201ENST00000318129 COPRSQ9NQ92 184 aa12.41□□□□□ -0.42
GINS3-201ENST00000318129 CHMP3Q9Y3E7 222 aa12.41□□□□□ -0.42
GINS3-201ENST00000318129 GTF2E1P29083 439 aaPredicted RBP12.4□□□□□ -0.42
GINS3-201ENST00000318129 TERF1P54274 439 aa12.4□□□□□ -0.42
GINS3-201ENST00000318129 SLC10A5Q5PT55 438 aa12.4□□□□□ -0.42
GINS3-201ENST00000318129 NBPF5PQ86XG9 351 aaPredicted RBP12.4□□□□□ -0.42
GINS3-201ENST00000318129 COL23A1Q86Y22 540 aaPredicted RBP12.4□□□□□ -0.42
GINS3-201ENST00000318129 NLGN1Q8N2Q7 840 aa12.4□□□□□ -0.42
GINS3-201ENST00000318129 LRRCC1Q9C099 1032 aa12.4□□□□□ -0.42
GINS3-201ENST00000318129 EXOC6BQ9Y2D4 811 aa12.4□□□□□ -0.42
GINS3-201ENST00000318129 CARMIL3Q8ND23 1372 aa12.4□□□□□ -0.42
GINS3-201ENST00000318129 FAM177BA6PVY3 158 aa12.4□□□□□ -0.42
GINS3-201ENST00000318129 RFX5P48382 616 aaPredicted RBP12.4□□□□□ -0.42
GINS3-201ENST00000318129 CTSWP56202 376 aa12.4□□□□□ -0.42
GINS3-201ENST00000318129 OS9Q13438 667 aaPredicted RBP12.4□□□□□ -0.42
GINS3-201ENST00000318129 DEFB132Q7Z7B7 95 aa12.4□□□□□ -0.42
GINS3-201ENST00000318129 SYNE4Q8N205 404 aa12.4□□□□□ -0.42
GINS3-201ENST00000318129 COL24A1Q17RW2 1714 aa12.39□□□□□ -0.43
GINS3-201ENST00000318129 NFIXQ14938 502 aa12.39□□□□□ -0.43
GINS3-201ENST00000318129 CCDC57Q2TAC2 916 aa12.39□□□□□ -0.43
GINS3-201ENST00000318129 TTLL11Q8NHH1 800 aa12.39□□□□□ -0.43
GINS3-201ENST00000318129 KIF1BPQ96EK5 621 aa12.39□□□□□ -0.43
GINS3-201ENST00000318129 MAP7D2Q96T17 732 aa12.39□□□□□ -0.43
GINS3-201ENST00000318129 CHMP5Q9NZZ3 219 aa12.39□□□□□ -0.43
GINS3-201ENST00000318129 MYH3P11055 1940 aa12.39□□□□□ -0.43
GINS3-201ENST00000318129 TM4SF1P30408 202 aa12.39□□□□□ -0.43
GINS3-201ENST00000318129 LNPKQ9C0E8 428 aa12.39□□□□□ -0.43
GINS3-201ENST00000318129 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
GINS3-201ENST00000318129 PNPLA7Q6ZV29 1317 aa12.38□□□□□ -0.43
GINS3-201ENST00000318129 QSER1Q2KHR3 1735 aa12.38□□□□□ -0.43
GINS3-201ENST00000318129 OFD1O75665 1012 aa12.38□□□□□ -0.43
GINS3-201ENST00000318129 PTPN12Q05209 780 aaKnown RBP12.38□□□□□ -0.43
GINS3-201ENST00000318129 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
GINS3-201ENST00000318129 TUBGCP6Q96RT7 1819 aa12.38□□□□□ -0.43
GINS3-201ENST00000318129 HCLS1P14317 486 aaPredicted RBP12.37□□□□□ -0.43
GINS3-201ENST00000318129 ERFEQ4G0M1 354 aa12.37□□□□□ -0.43
GINS3-201ENST00000318129 CCDC152Q4G0S7 254 aa12.37□□□□□ -0.43
GINS3-201ENST00000318129 NUTM1Q86Y26 1132 aa12.37□□□□□ -0.43
GINS3-201ENST00000318129 RHPN1Q8TCX5 695 aa12.37□□□□□ -0.43
GINS3-201ENST00000318129 PA2G4Q9UQ80 394 aaKnown RBP12.37□□□□□ -0.43
GINS3-201ENST00000318129 LAMB2P55268 1798 aa12.37□□□□□ -0.43
GINS3-201ENST00000318129 ANKRD18BA2A2Z9 1011 aa12.37□□□□□ -0.43
GINS3-201ENST00000318129 APBB1O00213 710 aa12.37□□□□□ -0.43
GINS3-201ENST00000318129 NPHP1O15259 732 aa12.37□□□□□ -0.43
GINS3-201ENST00000318129 SMAP1Q8IYB5 467 aaPredicted RBP12.37□□□□□ -0.43
GINS3-201ENST00000318129 UPF2Q9HAU5 1272 aaKnown RBP12.37□□□□□ -0.43
GINS3-201ENST00000318129 RTL9Q8NET4 1388 aa12.37□□□□□ -0.43
GINS3-201ENST00000318129 DDX11L8A8MPP1 907 aa12.36□□□□□ -0.43
GINS3-201ENST00000318129 CIAO1O76071 339 aa12.36□□□□□ -0.43
GINS3-201ENST00000318129 SF3B3Q15393 1217 aaKnown RBP12.36□□□□□ -0.43
GINS3-201ENST00000318129 TAF7LQ5H9L4 462 aa12.36□□□□□ -0.43
GINS3-201ENST00000318129 GAS2L3Q86XJ1 694 aa12.36□□□□□ -0.43
GINS3-201ENST00000318129 SERPINB2P05120 415 aa12.36□□□□□ -0.43
GINS3-201ENST00000318129 CNBD1Q8NA66 436 aa12.36□□□□□ -0.43
GINS3-201ENST00000318129 NLRP3Q96P20 1036 aa12.36□□□□□ -0.43
GINS3-201ENST00000318129 DDX60Q8IY21 1712 aaKnown RBP12.35□□□□□ -0.43
GINS3-201ENST00000318129 EYA2O00167 538 aa12.35□□□□□ -0.43
GINS3-201ENST00000318129 ITGA6P23229 1130 aa12.35□□□□□ -0.43
GINS3-201ENST00000318129 IL15P40933 162 aaPredicted RBP12.35□□□□□ -0.43
GINS3-201ENST00000318129 ST5P78524 1137 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms