RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 ERBB4Q15303 1308 aa8.53□□□□□ -1.04
LYSMD3-201ENST00000315948 IRS4O14654 1257 aaPredicted RBP8.53□□□□□ -1.04
LYSMD3-201ENST00000315948 TAF5LO75529 589 aa8.53□□□□□ -1.04
LYSMD3-201ENST00000315948 ITGA6P23229 1130 aa8.53□□□□□ -1.04
LYSMD3-201ENST00000315948 NMIQ13287 307 aaPredicted RBP8.53□□□□□ -1.04
LYSMD3-201ENST00000315948 TTLL11Q8NHH1 800 aa8.53□□□□□ -1.04
LYSMD3-201ENST00000315948 GJD4Q96KN9 370 aaPredicted RBP8.53□□□□□ -1.04
LYSMD3-201ENST00000315948 COL15A1P39059 1388 aa8.53□□□□□ -1.04
LYSMD3-201ENST00000315948 CAMTA2O94983 1202 aa8.52□□□□□ -1.04
LYSMD3-201ENST00000315948 BECN1Q14457 450 aa8.52□□□□□ -1.04
LYSMD3-201ENST00000315948 FOXD4L5Q5VV16 416 aaPredicted RBP8.52□□□□□ -1.04
LYSMD3-201ENST00000315948 SEPT12Q8IYM1 358 aa8.52□□□□□ -1.04
LYSMD3-201ENST00000315948 ZBTB38Q8NAP3 1195 aaPredicted RBP8.52□□□□□ -1.04
LYSMD3-201ENST00000315948 FOXD4L4Q8WXT5 416 aaPredicted RBP8.52□□□□□ -1.04
LYSMD3-201ENST00000315948 PLEKHG2Q9H7P9 1386 aa8.52□□□□□ -1.04
LYSMD3-201ENST00000315948 TUBGCP6Q96RT7 1819 aa8.52□□□□□ -1.05
LYSMD3-201ENST00000315948 ADCK5Q3MIX3 580 aa8.52□□□□□ -1.05
LYSMD3-201ENST00000315948 HSP90AB4PQ58FF6 505 aa8.52□□□□□ -1.05
LYSMD3-201ENST00000315948 HSCBQ8IWL3 235 aa8.52□□□□□ -1.05
LYSMD3-201ENST00000315948 LRRC4BQ9NT99 713 aa8.52□□□□□ -1.05
LYSMD3-201ENST00000315948 NIP7Q9Y221 180 aaKnown RBP eCLIP8.52□□□□□ -1.05
LYSMD3-201ENST00000315948 A0A1B0GUL7 405 aa8.52□□□□□ -1.05
LYSMD3-201ENST00000315948 GLRX3O76003 335 aaKnown RBP8.52□□□□□ -1.05
LYSMD3-201ENST00000315948 NEK4P51957 841 aa8.52□□□□□ -1.05
LYSMD3-201ENST00000315948 GOLIM4O00461 696 aa8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 SGSM2O43147 1006 aa8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 IL6STP40189 918 aaPredicted RBP8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 CCDC57Q2TAC2 916 aa8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 CASC1Q6TDU7 716 aa8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 FSD1Q9BTV5 496 aa8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 WNK3Q9BYP7 1800 aa8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 CNTROBQ8N137 903 aa8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 TEX13AQ9BXU3 409 aaPredicted RBP8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 LSG1Q9H089 658 aaKnown RBP8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 EYA2O00167 538 aa8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 PCCAP05165 728 aaPredicted RBP8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 CDCA7Q9BWT1 371 aaPredicted RBP8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 QTRT2Q9H974 415 aaKnown RBP8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 GNPATO15228 680 aa8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 ERC1Q8IUD2 1116 aa8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 ZNF34Q8IZ26 560 aa8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 DIAPH3Q9NSV4 1193 aa8.51□□□□□ -1.05
LYSMD3-201ENST00000315948 REC8O95072 547 aa8.5□□□□□ -1.05
LYSMD3-201ENST00000315948 FKBP4Q02790 459 aaKnown RBP eCLIP8.5□□□□□ -1.05
LYSMD3-201ENST00000315948 TAF7LQ5H9L4 462 aa8.5□□□□□ -1.05
LYSMD3-201ENST00000315948 VPS53Q5VIR6 699 aa8.5□□□□□ -1.05
LYSMD3-201ENST00000315948 USPL1Q5W0Q7 1092 aa8.5□□□□□ -1.05
LYSMD3-201ENST00000315948 PRPF40BQ6NWY9 871 aaKnown RBP8.5□□□□□ -1.05
LYSMD3-201ENST00000315948 BCL2L12Q9HB09 334 aa8.5□□□□□ -1.05
LYSMD3-201ENST00000315948 IQSEC3Q9UPP2 1182 aaPredicted RBP8.5□□□□□ -1.05
LYSMD3-201ENST00000315948 CTSWP56202 376 aa8.5□□□□□ -1.05
LYSMD3-201ENST00000315948 IFIT5Q13325 482 aaKnown RBP8.5□□□□□ -1.05
LYSMD3-201ENST00000315948 TBC1D9BQ66K14 1250 aa8.5□□□□□ -1.05
LYSMD3-201ENST00000315948 LDHAL6AQ6ZMR3 332 aa8.5□□□□□ -1.05
LYSMD3-201ENST00000315948 TTC41PQ6P2S7 1318 aa8.5□□□□□ -1.05
LYSMD3-201ENST00000315948 USP42Q9H9J4 1324 aaKnown RBP8.5□□□□□ -1.05
LYSMD3-201ENST00000315948 TRIM37O94972 964 aa8.5□□□□□ -1.05
LYSMD3-201ENST00000315948 HSP90AA1P07900 732 aaKnown RBP8.49□□□□□ -1.05
LYSMD3-201ENST00000315948 CCNL1Q9UK58 526 aaPredicted RBP8.49□□□□□ -1.05
LYSMD3-201ENST00000315948 K7ELQ4 463 aaPredicted RBP8.49□□□□□ -1.05
LYSMD3-201ENST00000315948 FOXD4L6Q3SYB3 417 aaPredicted RBP8.49□□□□□ -1.05
LYSMD3-201ENST00000315948 ERFEQ4G0M1 354 aa8.49□□□□□ -1.05
LYSMD3-201ENST00000315948 FOXD4L3Q6VB84 417 aaPredicted RBP8.49□□□□□ -1.05
LYSMD3-201ENST00000315948 AK9Q5TCS8 1911 aa8.49□□□□□ -1.05
LYSMD3-201ENST00000315948 PPFIA3O75145 1194 aa8.49□□□□□ -1.05
LYSMD3-201ENST00000315948 CSF1RP07333 972 aa8.49□□□□□ -1.05
LYSMD3-201ENST00000315948 XAGE2Q96GT9 111 aa8.49□□□□□ -1.05
LYSMD3-201ENST00000315948 TAF1P21675 1872 aa8.49□□□□□ -1.05
LYSMD3-201ENST00000315948 TRIM28Q13263 835 aaKnown RBP8.49□□□□□ -1.05
LYSMD3-201ENST00000315948 SNX14Q9Y5W7 946 aa8.49□□□□□ -1.05
LYSMD3-201ENST00000315948 METTL24Q5JXM2 366 aa8.48□□□□□ -1.05
LYSMD3-201ENST00000315948 CNNM1Q9NRU3 951 aa8.48□□□□□ -1.05
LYSMD3-201ENST00000315948 LARGE1O95461 756 aa8.48□□□□□ -1.05
LYSMD3-201ENST00000315948 SSFA2P28290 1259 aa8.48□□□□□ -1.05
LYSMD3-201ENST00000315948 EVI5LQ96CN4 794 aa8.48□□□□□ -1.05
LYSMD3-201ENST00000315948 RIPOR2Q9Y4F9 1068 aa8.48□□□□□ -1.05
LYSMD3-201ENST00000315948 NUP98P52948 1817 aa8.48□□□□□ -1.05
LYSMD3-201ENST00000315948 RIC1Q4ADV7 1423 aa8.48□□□□□ -1.05
LYSMD3-201ENST00000315948 AOX1Q06278 1338 aa8.48□□□□□ -1.05
LYSMD3-201ENST00000315948 SPATA31A6Q5VVP1 1343 aa8.48□□□□□ -1.05
LYSMD3-201ENST00000315948 NTSR2O95665 410 aa8.48□□□□□ -1.05
LYSMD3-201ENST00000315948 ZNF609O15014 1411 aa8.48□□□□□ -1.05
LYSMD3-201ENST00000315948 RAD50Q92878 1312 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 IL15P40933 162 aaPredicted RBP8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 GPATCH3Q96I76 525 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 CEP126Q9P2H0 1117 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 NWD2Q9ULI1 1742 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 ATP5JP18859 108 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 HSPA4P34932 840 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 DDIT3P35638 169 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 ZAP70P43403 619 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 PHKA1P46020 1223 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 FAM196AQ6ZSG2 479 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 ARHGEF1Q92888 912 aaKnown RBP8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 SNX21Q969T3 373 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 LRRC2Q9BYS8 371 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 HDAC5Q9UQL6 1122 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 ABCC12Q96J65 1359 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 KLRK1P26718 216 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 RABEP1Q15276 862 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms