RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 FAM177A1Q8N128 213 aaPredicted RBP18.91■□□□□ 0.62
SOX30-202ENST00000311371 IFIT2P09913 472 aaKnown RBP18.9■□□□□ 0.62
SOX30-202ENST00000311371 GSCP56915 257 aaPredicted RBP18.9■□□□□ 0.62
SOX30-202ENST00000311371 SUGP1Q8IWZ8 645 aaKnown RBP18.9■□□□□ 0.62
SOX30-202ENST00000311371 KIF24Q5T7B8 1368 aa18.9■□□□□ 0.62
SOX30-202ENST00000311371 CWC27Q6UX04 472 aaKnown RBP18.9■□□□□ 0.62
SOX30-202ENST00000311371 IL17RAQ96F46 866 aa18.9■□□□□ 0.62
SOX30-202ENST00000311371 ZSCAN16Q9H4T2 348 aaPredicted RBP18.89■□□□□ 0.62
SOX30-202ENST00000311371 NPHP3Q7Z494 1330 aa18.89■□□□□ 0.61
SOX30-202ENST00000311371 ATP6V1AP38606 617 aa18.89■□□□□ 0.61
SOX30-202ENST00000311371 MICALL1Q8N3F8 863 aa18.89■□□□□ 0.61
SOX30-202ENST00000311371 LEO1Q8WVC0 666 aaPredicted RBP18.89■□□□□ 0.61
SOX30-202ENST00000311371 PARD6BQ9BYG5 372 aa18.89■□□□□ 0.61
SOX30-202ENST00000311371 HYPKQ9NX55 129 aa18.89■□□□□ 0.61
SOX30-202ENST00000311371 A2ML1A8K2U0 1454 aa18.89■□□□□ 0.61
SOX30-202ENST00000311371 SBNO2Q9Y2G9 1366 aa18.89■□□□□ 0.61
SOX30-202ENST00000311371 MCM6Q14566 821 aa18.88■□□□□ 0.61
SOX30-202ENST00000311371 SWT1Q5T5J6 900 aaKnown RBP18.88■□□□□ 0.61
SOX30-202ENST00000311371 TMEM132EQ6IEE7 984 aa18.88■□□□□ 0.61
SOX30-202ENST00000311371 TMC6Q7Z403 805 aa18.88■□□□□ 0.61
SOX30-202ENST00000311371 PDE11AQ9HCR9 933 aa18.88■□□□□ 0.61
SOX30-202ENST00000311371 TTC21AQ8NDW8 1320 aa18.88■□□□□ 0.61
SOX30-202ENST00000311371 UBR1Q8IWV7 1749 aa18.88■□□□□ 0.61
SOX30-202ENST00000311371 PSDA5PKW4 1024 aaPredicted RBP18.88■□□□□ 0.61
SOX30-202ENST00000311371 LRRFIP1Q32MZ4 808 aaKnown RBP18.88■□□□□ 0.61
SOX30-202ENST00000311371 ARMCX5Q6P1M9 558 aa18.88■□□□□ 0.61
SOX30-202ENST00000311371 SCAND2PQ9GZW5 306 aaPredicted RBP18.88■□□□□ 0.61
SOX30-202ENST00000311371 FCHSD2O94868 740 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 CAVIN2O95810 425 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 SFPQP23246 707 aaKnown RBP eCLIP18.87■□□□□ 0.61
SOX30-202ENST00000311371 SATB1Q01826 763 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 NBPF11Q86T75 865 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 PGBD1Q96JS3 809 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 CABP2Q9NPB3 220 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 NSD2O96028 1365 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 COL3A1P02461 1466 aaPredicted RBP18.87■□□□□ 0.61
SOX30-202ENST00000311371 FANCGO15287 622 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 NFE2L2Q16236 605 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 LONRF2Q1L5Z9 754 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 AOPEPQ8N6M6 819 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 DNAAF4Q8WXU2 420 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 LRRCC1Q9C099 1032 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 MNAT1P51948 309 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 CCDC30Q5VVM6 783 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 DHX40Q8IX18 779 aaKnown RBP18.87■□□□□ 0.61
SOX30-202ENST00000311371 PRAM1Q96QH2 718 aa18.87■□□□□ 0.61
SOX30-202ENST00000311371 SRRTQ9BXP5 876 aaKnown RBP18.87■□□□□ 0.61
SOX30-202ENST00000311371 ST3GAL1Q11201 340 aa18.86■□□□□ 0.61
SOX30-202ENST00000311371 STX1AQ16623 288 aa18.86■□□□□ 0.61
SOX30-202ENST00000311371 SLC4A10Q6U841 1118 aa18.86■□□□□ 0.61
SOX30-202ENST00000311371 GPR161Q8N6U8 529 aaKnown RBP18.86■□□□□ 0.61
SOX30-202ENST00000311371 PHLPP2Q6ZVD8 1323 aa18.86■□□□□ 0.61
SOX30-202ENST00000311371 EVC2Q86UK5 1308 aa18.86■□□□□ 0.61
SOX30-202ENST00000311371 N4BP1O75113 896 aaKnown RBP18.86■□□□□ 0.61
SOX30-202ENST00000311371 ZRSR1Q15695 479 aaKnown RBP18.85■□□□□ 0.61
SOX30-202ENST00000311371 MYO3AQ8NEV4 1616 aa18.85■□□□□ 0.61
SOX30-202ENST00000311371 ERCC4Q92889 916 aaPredicted RBP18.85■□□□□ 0.61
SOX30-202ENST00000311371 SPG7Q9UQ90 795 aa18.85■□□□□ 0.61
SOX30-202ENST00000311371 FAN1Q9Y2M0 1017 aa18.85■□□□□ 0.61
SOX30-202ENST00000311371 PARP3Q9Y6F1 533 aa18.85■□□□□ 0.61
SOX30-202ENST00000311371 SALL3Q9BXA9 1300 aa18.85■□□□□ 0.61
SOX30-202ENST00000311371 KIF1CO43896 1103 aaKnown RBP18.85■□□□□ 0.61
SOX30-202ENST00000311371 ME3Q16798 604 aa18.85■□□□□ 0.61
SOX30-202ENST00000311371 CEP89Q96ST8 783 aa18.85■□□□□ 0.61
SOX30-202ENST00000311371 OSBPL5Q9H0X9 879 aaPredicted RBP18.85■□□□□ 0.61
SOX30-202ENST00000311371 NRXN1Q9ULB1 1477 aa18.84■□□□□ 0.61
SOX30-202ENST00000311371 RPGRIP1LQ68CZ1 1315 aa18.84■□□□□ 0.61
SOX30-202ENST00000311371 FAM83GA6ND36 823 aa18.84■□□□□ 0.61
SOX30-202ENST00000311371 NBPF6Q5VWK0 638 aa18.84■□□□□ 0.61
SOX30-202ENST00000311371 EGFL6Q8IUX8 553 aa18.84■□□□□ 0.61
SOX30-202ENST00000311371 NBPF4Q96M43 638 aa18.84■□□□□ 0.61
SOX30-202ENST00000311371 JAKMIP1Q96N16 626 aaKnown RBP18.84■□□□□ 0.61
SOX30-202ENST00000311371 MED4Q9NPJ6 270 aa18.84■□□□□ 0.61
SOX30-202ENST00000311371 KIAA1210Q9ULL0 1709 aa18.84■□□□□ 0.61
SOX30-202ENST00000311371 NRDCO43847 1150 aa18.84■□□□□ 0.61
SOX30-202ENST00000311371 PHACTR2O75167 634 aa18.84■□□□□ 0.61
SOX30-202ENST00000311371 FBLN1P23142 703 aa18.84■□□□□ 0.61
SOX30-202ENST00000311371 CEBPZQ03701 1054 aaKnown RBP18.84■□□□□ 0.61
SOX30-202ENST00000311371 DCTN1Q14203 1278 aa18.84■□□□□ 0.61
SOX30-202ENST00000311371 LRRC31Q6UY01 552 aa18.84■□□□□ 0.61
SOX30-202ENST00000311371 USP32Q8NFA0 1604 aa18.83■□□□□ 0.61
SOX30-202ENST00000311371 ZNF853P0CG23 659 aa18.83■□□□□ 0.61
SOX30-202ENST00000311371 SAFB2Q14151 953 aaKnown RBP eCLIP18.83■□□□□ 0.61
SOX30-202ENST00000311371 TRIM65Q6PJ69 517 aa18.83■□□□□ 0.61
SOX30-202ENST00000311371 TADA2BQ86TJ2 420 aa18.83■□□□□ 0.61
SOX30-202ENST00000311371 EFCAB13Q8IY85 973 aa18.83■□□□□ 0.61
SOX30-202ENST00000311371 CCDC150Q8NCX0 1101 aa18.83■□□□□ 0.61
SOX30-202ENST00000311371 APOBRQ0VD83 1088 aa18.83■□□□□ 0.6
SOX30-202ENST00000311371 ISM2Q6H9L7 571 aa18.83■□□□□ 0.6
SOX30-202ENST00000311371 ZSWIM4Q9H7M6 989 aa18.83■□□□□ 0.6
SOX30-202ENST00000311371 MKRN1Q9UHC7 482 aaKnown RBP18.83■□□□□ 0.6
SOX30-202ENST00000311371 ADCK5Q3MIX3 580 aa18.82■□□□□ 0.6
SOX30-202ENST00000311371 AKAP2Q9Y2D5 859 aa18.82■□□□□ 0.6
SOX30-202ENST00000311371 TTC41PQ6P2S7 1318 aa18.82■□□□□ 0.6
SOX30-202ENST00000311371 TUBB4AP04350 444 aa18.82■□□□□ 0.6
SOX30-202ENST00000311371 PPP2R3AQ06190 1150 aa18.82■□□□□ 0.6
SOX30-202ENST00000311371 XPO4Q9C0E2 1151 aaKnown RBP18.82■□□□□ 0.6
SOX30-202ENST00000311371 IFNKQ9P0W0 207 aa18.82■□□□□ 0.6
SOX30-202ENST00000311371 SRGAP3O43295 1099 aa18.81■□□□□ 0.6
SOX30-202ENST00000311371 PLEKHO1Q53GL0 409 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms