RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 ISCA1Q9BUE6 129 aa10.36□□□□□ -0.75
CHD6-201ENST00000309279 KCNG1Q9UIX4 513 aa10.36□□□□□ -0.75
CHD6-201ENST00000309279 MAP3K2Q9Y2U5 619 aa10.36□□□□□ -0.75
CHD6-201ENST00000309279 PARP3Q9Y6F1 533 aa10.36□□□□□ -0.75
CHD6-201ENST00000309279 UBN2Q6ZU65 1347 aa10.36□□□□□ -0.75
CHD6-201ENST00000309279 ZC3H4Q9UPT8 1303 aaKnown RBP10.36□□□□□ -0.75
CHD6-201ENST00000309279 SPDYE4A6NLX3 237 aa10.36□□□□□ -0.75
CHD6-201ENST00000309279 BCAR3O75815 825 aa10.36□□□□□ -0.75
CHD6-201ENST00000309279 SERPINB2P05120 415 aa10.36□□□□□ -0.75
CHD6-201ENST00000309279 PTMAP06454 111 aaKnown RBP10.36□□□□□ -0.75
CHD6-201ENST00000309279 PARP10Q53GL7 1025 aa10.36□□□□□ -0.75
CHD6-201ENST00000309279 BICDL1Q6ZP65 573 aa10.36□□□□□ -0.75
CHD6-201ENST00000309279 ARHGAP45Q92619 1136 aa10.36□□□□□ -0.75
CHD6-201ENST00000309279 SGSM3Q96HU1 749 aa10.36□□□□□ -0.75
CHD6-201ENST00000309279 KIF13BQ9NQT8 1826 aa10.35□□□□□ -0.75
CHD6-201ENST00000309279 ZMYND10O75800 440 aa10.35□□□□□ -0.75
CHD6-201ENST00000309279 SPTY2D1Q68D10 685 aaPredicted RBP10.35□□□□□ -0.75
CHD6-201ENST00000309279 NLRP10Q86W26 655 aa10.35□□□□□ -0.75
CHD6-201ENST00000309279 DNAAF4Q8WXU2 420 aa10.35□□□□□ -0.75
CHD6-201ENST00000309279 NOB1Q9ULX3 412 aaKnown RBP10.35□□□□□ -0.75
CHD6-201ENST00000309279 IBTKQ9P2D0 1353 aaPredicted RBP10.35□□□□□ -0.75
CHD6-201ENST00000309279 KIF16BQ96L93 1317 aa10.34□□□□□ -0.75
CHD6-201ENST00000309279 MARCH6O60337 910 aa10.34□□□□□ -0.75
CHD6-201ENST00000309279 IGKV5-2P06315 115 aa10.34□□□□□ -0.75
CHD6-201ENST00000309279 GPTP24298 496 aa10.34□□□□□ -0.75
CHD6-201ENST00000309279 DEKP35659 375 aaKnown RBP10.34□□□□□ -0.75
CHD6-201ENST00000309279 SUSD4Q5VX71 490 aa10.34□□□□□ -0.75
CHD6-201ENST00000309279 TPTE2Q6XPS3 522 aa10.34□□□□□ -0.75
CHD6-201ENST00000309279 MYD88Q99836 296 aa10.34□□□□□ -0.75
CHD6-201ENST00000309279 UTRNP46939 3433 aa10.34□□□□□ -0.75
CHD6-201ENST00000309279 F6X3S4 739 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 ATP5J2-PTCD1G3V325 749 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 NEXNQ0ZGT2 675 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 BEND3Q5T5X7 828 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 PRR5LQ6MZQ0 368 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 PPP1R42Q7Z4L9 355 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 NBPF5PQ86XG9 351 aaPredicted RBP10.33□□□□□ -0.76
CHD6-201ENST00000309279 CCDC191Q8NCU4 936 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 LINS1Q8NG48 757 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 NYXQ9GZU5 481 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 RCAN3Q9UKA8 241 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 CD2APQ9Y5K6 639 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 RNF123Q5XPI4 1314 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 C10orf71Q711Q0 1435 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 NEURL1BA8MQ27 555 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 IPO8O15397 1037 aaKnown RBP10.33□□□□□ -0.76
CHD6-201ENST00000309279 NTSR2O95665 410 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 CNBD1Q8NA66 436 aa10.33□□□□□ -0.76
CHD6-201ENST00000309279 UTP14AQ9BVJ6 771 aaKnown RBP10.33□□□□□ -0.76
CHD6-201ENST00000309279 API5Q9BZZ5 524 aaKnown RBP10.33□□□□□ -0.76
CHD6-201ENST00000309279 OS9Q13438 667 aaPredicted RBP10.32□□□□□ -0.76
CHD6-201ENST00000309279 CWF19L2Q2TBE0 894 aaKnown RBP10.32□□□□□ -0.76
CHD6-201ENST00000309279 SLC10A5Q5PT55 438 aa10.32□□□□□ -0.76
CHD6-201ENST00000309279 ATF7IPQ6VMQ6 1270 aa10.32□□□□□ -0.76
CHD6-201ENST00000309279 BRIP1Q9BX63 1249 aa10.32□□□□□ -0.76
CHD6-201ENST00000309279 PPP1R1BQ9UD71 204 aaPredicted RBP10.32□□□□□ -0.76
CHD6-201ENST00000309279 PXDNLA1KZ92 1463 aa10.32□□□□□ -0.76
CHD6-201ENST00000309279 N4BP2Q86UW6 1770 aaPredicted RBP10.31□□□□□ -0.76
CHD6-201ENST00000309279 ANKRD31Q8N7Z5 1873 aa10.31□□□□□ -0.76
CHD6-201ENST00000309279 KLRG2A4D1S0 409 aaPredicted RBP10.31□□□□□ -0.76
CHD6-201ENST00000309279 ALDH1L1O75891 902 aa10.31□□□□□ -0.76
CHD6-201ENST00000309279 TRIM27P14373 513 aa10.31□□□□□ -0.76
CHD6-201ENST00000309279 GCKRQ14397 625 aa10.31□□□□□ -0.76
CHD6-201ENST00000309279 ZKSCAN2Q63HK3 967 aa10.31□□□□□ -0.76
CHD6-201ENST00000309279 ZBTB38Q8NAP3 1195 aaPredicted RBP10.31□□□□□ -0.76
CHD6-201ENST00000309279 SYT17Q9BSW7 474 aa10.31□□□□□ -0.76
CHD6-201ENST00000309279 FHDC1Q9C0D6 1143 aaPredicted RBP10.31□□□□□ -0.76
CHD6-201ENST00000309279 KDM4CQ9H3R0 1056 aa10.31□□□□□ -0.76
CHD6-201ENST00000309279 CWC25Q9NXE8 425 aaPredicted RBP10.31□□□□□ -0.76
CHD6-201ENST00000309279 TRMT112Q9UI30 125 aaKnown RBP10.31□□□□□ -0.76
CHD6-201ENST00000309279 ARIH1Q9Y4X5 557 aaPredicted RBP10.31□□□□□ -0.76
CHD6-201ENST00000309279 PPME1Q9Y570 386 aa10.31□□□□□ -0.76
CHD6-201ENST00000309279 SH3TC1Q8TE82 1336 aa10.31□□□□□ -0.76
CHD6-201ENST00000309279 RIC1Q4ADV7 1423 aa10.31□□□□□ -0.76
CHD6-201ENST00000309279 FAM177BA6PVY3 158 aa10.3□□□□□ -0.76
CHD6-201ENST00000309279 TPD52L2O43399 206 aaKnown RBP10.3□□□□□ -0.76
CHD6-201ENST00000309279 PCCAP05165 728 aaPredicted RBP10.3□□□□□ -0.76
CHD6-201ENST00000309279 TGFB2P61812 414 aa10.3□□□□□ -0.76
CHD6-201ENST00000309279 ST5P78524 1137 aa10.3□□□□□ -0.76
CHD6-201ENST00000309279 ERFEQ4G0M1 354 aa10.3□□□□□ -0.76
CHD6-201ENST00000309279 SLC4A10Q6U841 1118 aa10.3□□□□□ -0.76
CHD6-201ENST00000309279 NUTM1Q86Y26 1132 aa10.3□□□□□ -0.76
CHD6-201ENST00000309279 FRAT1Q92837 279 aaPredicted RBP10.3□□□□□ -0.76
CHD6-201ENST00000309279 SRCIN1Q9C0H9 1055 aa10.3□□□□□ -0.76
CHD6-201ENST00000309279 KIAA1551Q9HCM1 1747 aa10.3□□□□□ -0.76
CHD6-201ENST00000309279 ABCC4O15439 1325 aa10.3□□□□□ -0.76
CHD6-201ENST00000309279 H7C1W4 665 aa10.29□□□□□ -0.76
CHD6-201ENST00000309279 GTF2E1P29083 439 aaPredicted RBP10.29□□□□□ -0.76
CHD6-201ENST00000309279 INTS3Q68E01 1043 aaKnown RBP10.29□□□□□ -0.76
CHD6-201ENST00000309279 FAM89AQ96GI7 184 aa10.29□□□□□ -0.76
CHD6-201ENST00000309279 PDZRN3Q9UPQ7 1066 aa10.29□□□□□ -0.76
CHD6-201ENST00000309279 CDHR2Q9BYE9 1310 aa10.29□□□□□ -0.76
CHD6-201ENST00000309279 DDX60Q8IY21 1712 aaKnown RBP10.29□□□□□ -0.76
CHD6-201ENST00000309279 ABCC12Q96J65 1359 aa10.29□□□□□ -0.76
CHD6-201ENST00000309279 NPHP1O15259 732 aa10.29□□□□□ -0.76
CHD6-201ENST00000309279 PDE6BP35913 854 aa10.29□□□□□ -0.76
CHD6-201ENST00000309279 CCT4P50991 539 aaKnown RBP10.29□□□□□ -0.76
CHD6-201ENST00000309279 CASP7P55210 303 aa10.29□□□□□ -0.76
CHD6-201ENST00000309279 SYNE4Q8N205 404 aa10.29□□□□□ -0.76
CHD6-201ENST00000309279 CCDC24Q8N4L8 307 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms