RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 TAF5LO75529 589 aa18.01■□□□□ 0.47
CSDC2-201ENST00000306149 SLFNL1Q499Z3 407 aa18.01■□□□□ 0.47
CSDC2-201ENST00000306149 RNF20Q5VTR2 975 aa18.01■□□□□ 0.47
CSDC2-201ENST00000306149 TTC6Q86TZ1 520 aa18.01■□□□□ 0.47
CSDC2-201ENST00000306149 IFNL2Q8IZJ0 200 aa18.01■□□□□ 0.47
CSDC2-201ENST00000306149 VSIG10Q8N0Z9 540 aa18.01■□□□□ 0.47
CSDC2-201ENST00000306149 DBNDD2Q9BQY9 259 aa18.01■□□□□ 0.47
CSDC2-201ENST00000306149 TFIP11Q9UBB9 837 aaKnown RBP18.01■□□□□ 0.47
CSDC2-201ENST00000306149 COL15A1P39059 1388 aa18.01■□□□□ 0.47
CSDC2-201ENST00000306149 MEGF6O75095 1541 aa18.01■□□□□ 0.47
CSDC2-201ENST00000306149 A0A087WZG4 1122 aa18.01■□□□□ 0.47
CSDC2-201ENST00000306149 SNRPA1P09661 255 aaKnown RBP18.01■□□□□ 0.47
CSDC2-201ENST00000306149 RFX5P48382 616 aaPredicted RBP18.01■□□□□ 0.47
CSDC2-201ENST00000306149 RBM10P98175 930 aaKnown RBP18.01■□□□□ 0.47
CSDC2-201ENST00000306149 TNNI3KQ59H18 835 aa18.01■□□□□ 0.47
CSDC2-201ENST00000306149 FPGT-TNNI3KV9GXZ4 949 aa18.01■□□□□ 0.47
CSDC2-201ENST00000306149 MED23Q9ULK4 1368 aa18■□□□□ 0.47
CSDC2-201ENST00000306149 C1orf167Q5SNV9 1468 aa18■□□□□ 0.47
CSDC2-201ENST00000306149 KIAA2012Q0VF49 1180 aa18■□□□□ 0.47
CSDC2-201ENST00000306149 CAMK4Q16566 473 aa18■□□□□ 0.47
CSDC2-201ENST00000306149 DDX46Q7L014 1031 aaKnown RBP18■□□□□ 0.47
CSDC2-201ENST00000306149 TTC12Q9H892 705 aaPredicted RBP18■□□□□ 0.47
CSDC2-201ENST00000306149 COPRSQ9NQ92 184 aa18■□□□□ 0.47
CSDC2-201ENST00000306149 CAMTA1Q9Y6Y1 1673 aa17.99■□□□□ 0.47
CSDC2-201ENST00000306149 LRRC2Q9BYS8 371 aa17.99■□□□□ 0.47
CSDC2-201ENST00000306149 C19orf44Q9H6X5 657 aa17.99■□□□□ 0.47
CSDC2-201ENST00000306149 SNRKQ9NRH2 765 aa17.99■□□□□ 0.47
CSDC2-201ENST00000306149 C17orf53Q8N3J3 647 aaPredicted RBP17.99■□□□□ 0.47
CSDC2-201ENST00000306149 UQCRHLA0A096LP55 91 aa17.98■□□□□ 0.47
CSDC2-201ENST00000306149 JAK2O60674 1132 aa17.98■□□□□ 0.47
CSDC2-201ENST00000306149 UQCRHP07919 91 aa17.98■□□□□ 0.47
CSDC2-201ENST00000306149 SASS6Q6UVJ0 657 aa17.98■□□□□ 0.47
CSDC2-201ENST00000306149 FUCA2Q9BTY2 467 aa17.98■□□□□ 0.47
CSDC2-201ENST00000306149 LIG1P18858 919 aa17.98■□□□□ 0.47
CSDC2-201ENST00000306149 ZMYND15Q9H091 742 aa17.98■□□□□ 0.47
CSDC2-201ENST00000306149 TRPM3Q9HCF6 1732 aaPredicted RBP17.98■□□□□ 0.47
CSDC2-201ENST00000306149 AP5Z1O43299 807 aa17.97■□□□□ 0.47
CSDC2-201ENST00000306149 ATP5JP18859 108 aa17.97■□□□□ 0.47
CSDC2-201ENST00000306149 LMBR1LQ6UX01 489 aa17.97■□□□□ 0.47
CSDC2-201ENST00000306149 ADAMTS7Q9UKP4 1686 aa17.97■□□□□ 0.47
CSDC2-201ENST00000306149 KRT85P78386 507 aa17.97■□□□□ 0.47
CSDC2-201ENST00000306149 DDX11Q96FC9 970 aa17.97■□□□□ 0.47
CSDC2-201ENST00000306149 FMNL2Q96PY5 1086 aa17.97■□□□□ 0.47
CSDC2-201ENST00000306149 MAP7D2Q96T17 732 aa17.97■□□□□ 0.47
CSDC2-201ENST00000306149 CABP4P57796 275 aa17.96■□□□□ 0.47
CSDC2-201ENST00000306149 DYNC1I1O14576 645 aa17.96■□□□□ 0.47
CSDC2-201ENST00000306149 KDM4AO75164 1064 aa17.96■□□□□ 0.47
CSDC2-201ENST00000306149 NEUROD6Q96NK8 337 aa17.96■□□□□ 0.47
CSDC2-201ENST00000306149 ANKRD1Q15327 319 aa17.96■□□□□ 0.46
CSDC2-201ENST00000306149 DCAF5Q96JK2 942 aa17.96■□□□□ 0.46
CSDC2-201ENST00000306149 LMTK3Q96Q04 1460 aa17.96■□□□□ 0.46
CSDC2-201ENST00000306149 ATF3P18847 181 aa17.95■□□□□ 0.46
CSDC2-201ENST00000306149 NEK1Q96PY6 1258 aa17.95■□□□□ 0.46
CSDC2-201ENST00000306149 ZNF609O15014 1411 aa17.95■□□□□ 0.46
CSDC2-201ENST00000306149 SCN11AQ9UI33 1791 aa17.95■□□□□ 0.46
CSDC2-201ENST00000306149 PPFIA3O75145 1194 aa17.95■□□□□ 0.46
CSDC2-201ENST00000306149 CYP21A2P08686 494 aa17.95■□□□□ 0.46
CSDC2-201ENST00000306149 TIMM10P62072 90 aa17.95■□□□□ 0.46
CSDC2-201ENST00000306149 Q6ZUG5 572 aa17.95■□□□□ 0.46
CSDC2-201ENST00000306149 CKAP2LQ8IYA6 745 aa17.95■□□□□ 0.46
CSDC2-201ENST00000306149 HSP90B1P14625 803 aaKnown RBP17.94■□□□□ 0.46
CSDC2-201ENST00000306149 FOSBP53539 338 aa17.94■□□□□ 0.46
CSDC2-201ENST00000306149 RABL6Q3YEC7 729 aaPredicted RBP17.94■□□□□ 0.46
CSDC2-201ENST00000306149 FAM13BQ9NYF5 915 aa17.94■□□□□ 0.46
CSDC2-201ENST00000306149 ZNF142P52746 1687 aaPredicted RBP17.94■□□□□ 0.46
CSDC2-201ENST00000306149 PDCP20941 246 aa17.94■□□□□ 0.46
CSDC2-201ENST00000306149 HMG20BQ9P0W2 317 aa17.94■□□□□ 0.46
CSDC2-201ENST00000306149 DNTTIP2Q5QJE6 756 aaKnown RBP17.93■□□□□ 0.46
CSDC2-201ENST00000306149 USPL1Q5W0Q7 1092 aa17.93■□□□□ 0.46
CSDC2-201ENST00000306149 TTLL7Q6ZT98 887 aa17.93■□□□□ 0.46
CSDC2-201ENST00000306149 MRC1P22897 1456 aa17.93■□□□□ 0.46
CSDC2-201ENST00000306149 NBPF26B4DH59 902 aa17.93■□□□□ 0.46
CSDC2-201ENST00000306149 NBPF14Q5TI25 921 aa17.93■□□□□ 0.46
CSDC2-201ENST00000306149 NBPF10Q6P3W6 841 aaKnown RBP17.93■□□□□ 0.46
CSDC2-201ENST00000306149 NBPF15Q8N660 670 aa17.93■□□□□ 0.46
CSDC2-201ENST00000306149 SPC24Q8NBT2 197 aa17.93■□□□□ 0.46
CSDC2-201ENST00000306149 PIBF1Q8WXW3 757 aa17.93■□□□□ 0.46
CSDC2-201ENST00000306149 SPATA32Q96LK8 384 aa17.93■□□□□ 0.46
CSDC2-201ENST00000306149 DACT1Q9NYF0 836 aa17.93■□□□□ 0.46
CSDC2-201ENST00000306149 A0A0G2JLW4 131 aa17.92■□□□□ 0.46
CSDC2-201ENST00000306149 GOLIM4O00461 696 aa17.92■□□□□ 0.46
CSDC2-201ENST00000306149 CASP7P55210 303 aa17.92■□□□□ 0.46
CSDC2-201ENST00000306149 TSGA10IPQ3SY00 556 aa17.92■□□□□ 0.46
CSDC2-201ENST00000306149 BRF1Q92994 677 aa17.92■□□□□ 0.46
CSDC2-201ENST00000306149 GOLGA6L4A6NEF3 574 aa17.92■□□□□ 0.46
CSDC2-201ENST00000306149 PDIA4P13667 645 aaKnown RBP17.92■□□□□ 0.46
CSDC2-201ENST00000306149 MCMDC2Q4G0Z9 681 aa17.92■□□□□ 0.46
CSDC2-201ENST00000306149 ZNF594Q96JF6 807 aaPredicted RBP17.92■□□□□ 0.46
CSDC2-201ENST00000306149 HAUS7Q99871 368 aa17.92■□□□□ 0.46
CSDC2-201ENST00000306149 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.92■□□□□ 0.46
CSDC2-201ENST00000306149 FGD1P98174 961 aa17.91■□□□□ 0.46
CSDC2-201ENST00000306149 STOX1Q6ZVD7 989 aa17.91■□□□□ 0.46
CSDC2-201ENST00000306149 PLBD2Q8NHP8 589 aa17.91■□□□□ 0.46
CSDC2-201ENST00000306149 NUP62CLQ9H1M0 184 aa17.91■□□□□ 0.46
CSDC2-201ENST00000306149 JCADQ9P266 1359 aa17.91■□□□□ 0.46
CSDC2-201ENST00000306149 A1BGP04217 495 aa17.91■□□□□ 0.46
CSDC2-201ENST00000306149 CCDC192P0DO97 292 aa17.91■□□□□ 0.46
CSDC2-201ENST00000306149 FOXO4P98177 505 aa17.91■□□□□ 0.46
CSDC2-201ENST00000306149 CEBPZQ03701 1054 aaKnown RBP17.91■□□□□ 0.46
CSDC2-201ENST00000306149 GTF3C6Q969F1 213 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms