RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 UBE2HP62256 183 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 TTC31Q49AM3 519 aaPredicted RBP14.13□□□□□ -0.15
ABCA3-201ENST00000301732 CATIPQ7Z7H3 387 aa14.13□□□□□ -0.15
ABCA3-201ENST00000301732 DDX19AQ9NUU7 478 aaKnown RBP14.13□□□□□ -0.15
ABCA3-201ENST00000301732 ANKRD30BQ9BXX2 1392 aa14.12□□□□□ -0.15
ABCA3-201ENST00000301732 NEK1Q96PY6 1258 aa14.12□□□□□ -0.15
ABCA3-201ENST00000301732 SYNCQ9H7C4 482 aa14.12□□□□□ -0.15
ABCA3-201ENST00000301732 ADAMTS2O95450 1211 aa14.12□□□□□ -0.15
ABCA3-201ENST00000301732 SEC24BO95487 1268 aa14.12□□□□□ -0.15
ABCA3-201ENST00000301732 GSDMDP57764 484 aa14.12□□□□□ -0.15
ABCA3-201ENST00000301732 IFIT5Q13325 482 aaKnown RBP14.12□□□□□ -0.15
ABCA3-201ENST00000301732 AEBP2Q6ZN18 517 aaPredicted RBP14.12□□□□□ -0.15
ABCA3-201ENST00000301732 PPM1EQ8WY54 764 aa14.12□□□□□ -0.15
ABCA3-201ENST00000301732 TAOK3Q9H2K8 898 aa14.12□□□□□ -0.15
ABCA3-201ENST00000301732 CALML4Q96GE6 196 aa14.12□□□□□ -0.15
ABCA3-201ENST00000301732 PLCB3Q01970 1234 aa14.12□□□□□ -0.15
ABCA3-201ENST00000301732 TNIP1Q15025 636 aa14.11□□□□□ -0.15
ABCA3-201ENST00000301732 EXOC1Q9NV70 894 aa14.11□□□□□ -0.15
ABCA3-201ENST00000301732 SP4Q02446 784 aa14.11□□□□□ -0.15
ABCA3-201ENST00000301732 CCDC102BQ68D86 513 aa14.11□□□□□ -0.15
ABCA3-201ENST00000301732 SEPT14Q6ZU15 432 aa14.11□□□□□ -0.15
ABCA3-201ENST00000301732 MAPK8IP1Q9UQF2 711 aa14.11□□□□□ -0.15
ABCA3-201ENST00000301732 SDSP20132 328 aa14.11□□□□□ -0.15
ABCA3-201ENST00000301732 HEATR3Q7Z4Q2 680 aa14.11□□□□□ -0.15
ABCA3-201ENST00000301732 UTP14AQ9BVJ6 771 aaKnown RBP14.11□□□□□ -0.15
ABCA3-201ENST00000301732 SH2B1Q9NRF2 756 aaPredicted RBP14.11□□□□□ -0.15
ABCA3-201ENST00000301732 ZSCAN22P10073 491 aaPredicted RBP14.11□□□□□ -0.15
ABCA3-201ENST00000301732 CCT6AP40227 531 aaKnown RBP14.11□□□□□ -0.15
ABCA3-201ENST00000301732 PPP4R3AQ6IN85 833 aa14.11□□□□□ -0.15
ABCA3-201ENST00000301732 PPP1R42Q7Z4L9 355 aa14.11□□□□□ -0.15
ABCA3-201ENST00000301732 RRAGDQ9NQL2 400 aaPredicted RBP14.11□□□□□ -0.15
ABCA3-201ENST00000301732 IFNKQ9P0W0 207 aa14.11□□□□□ -0.15
ABCA3-201ENST00000301732 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.11□□□□□ -0.15
ABCA3-201ENST00000301732 MAP3K12Q12852 859 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 PSMD6Q15008 389 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 CCDC114Q96M63 670 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 TCP11L1Q9NUJ3 509 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 C6orf163Q5TEZ5 329 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 Q6ZUG5 572 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 CCDC121Q6ZUS5 278 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 UBE3BQ7Z3V4 1068 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 UBLCP1Q8WVY7 318 aaPredicted RBP14.1□□□□□ -0.15
ABCA3-201ENST00000301732 FERP16591 822 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 NAP1L3Q99457 506 aaPredicted RBP14.1□□□□□ -0.15
ABCA3-201ENST00000301732 PPP1R12CQ9BZL4 782 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 MRPS9P82933 396 aaKnown RBP14.1□□□□□ -0.15
ABCA3-201ENST00000301732 CCDC150Q8NCX0 1101 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 PA2G4Q9UQ80 394 aaKnown RBP14.1□□□□□ -0.15
ABCA3-201ENST00000301732 PAXBP1Q9Y5B6 917 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 CFTRP13569 1480 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 C6orf229H3BNL8 230 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 CPLX4Q7Z7G2 160 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 IQCGQ9H095 443 aaKnown RBP14.1□□□□□ -0.15
ABCA3-201ENST00000301732 MYOM3Q5VTT5 1437 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 STAT6P42226 847 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 SPAG5Q96R06 1193 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 ZKSCAN3Q9BRR0 538 aa14.1□□□□□ -0.15
ABCA3-201ENST00000301732 RTEL1-TNFRSF6BF6WH68 1400 aa14.09□□□□□ -0.15
ABCA3-201ENST00000301732 CCDC155Q8N6L0 562 aa14.09□□□□□ -0.15
ABCA3-201ENST00000301732 PICALMQ13492 652 aa14.09□□□□□ -0.15
ABCA3-201ENST00000301732 CUL5Q93034 780 aa14.09□□□□□ -0.15
ABCA3-201ENST00000301732 TBC1D32Q96NH3 1257 aa14.09□□□□□ -0.15
ABCA3-201ENST00000301732 DIXDC1Q155Q3 683 aa14.09□□□□□ -0.15
ABCA3-201ENST00000301732 CERS3Q8IU89 383 aa14.09□□□□□ -0.15
ABCA3-201ENST00000301732 ALG1Q9BT22 464 aa14.09□□□□□ -0.15
ABCA3-201ENST00000301732 RRBP1Q9P2E9 1410 aaKnown RBP14.09□□□□□ -0.15
ABCA3-201ENST00000301732 CTAGE5O15320 804 aa14.09□□□□□ -0.15
ABCA3-201ENST00000301732 PROCA1Q8NCQ7 364 aaPredicted RBP14.09□□□□□ -0.15
ABCA3-201ENST00000301732 RPGRQ92834 1020 aaKnown RBP14.09□□□□□ -0.15
ABCA3-201ENST00000301732 ZNF622Q969S3 477 aaKnown RBP eCLIP14.09□□□□□ -0.15
ABCA3-201ENST00000301732 TRIM31Q9BZY9 425 aa14.09□□□□□ -0.15
ABCA3-201ENST00000301732 PKD2L1Q9P0L9 805 aa14.09□□□□□ -0.15
ABCA3-201ENST00000301732 KLHL40Q2TBA0 621 aa14.09□□□□□ -0.15
ABCA3-201ENST00000301732 DAAM2Q86T65 1068 aa14.09□□□□□ -0.15
ABCA3-201ENST00000301732 PDE1CQ14123 709 aaPredicted RBP14.08□□□□□ -0.15
ABCA3-201ENST00000301732 ATP2B3Q16720 1220 aa14.08□□□□□ -0.15
ABCA3-201ENST00000301732 PTPROQ16827 1216 aa14.08□□□□□ -0.15
ABCA3-201ENST00000301732 CCDC171Q6TFL3 1326 aa14.08□□□□□ -0.16
ABCA3-201ENST00000301732 MEIS3Q99687 375 aa14.08□□□□□ -0.16
ABCA3-201ENST00000301732 FEZ1Q99689 392 aa14.08□□□□□ -0.16
ABCA3-201ENST00000301732 PCDHB15Q9Y5E8 787 aa14.08□□□□□ -0.16
ABCA3-201ENST00000301732 PPP2R5CQ13362 524 aa14.08□□□□□ -0.16
ABCA3-201ENST00000301732 SPATA24Q86W54 205 aa14.08□□□□□ -0.16
ABCA3-201ENST00000301732 KAT14Q9H8E8 782 aa14.08□□□□□ -0.16
ABCA3-201ENST00000301732 PI4KAP2A4QPH2 592 aa14.08□□□□□ -0.16
ABCA3-201ENST00000301732 PI4KAP1Q8N8J0 262 aa14.08□□□□□ -0.16
ABCA3-201ENST00000301732 CTAGE9A4FU28 777 aa14.07□□□□□ -0.16
ABCA3-201ENST00000301732 UBXN1Q04323 297 aa14.07□□□□□ -0.16
ABCA3-201ENST00000301732 TTC22Q5TAA0 569 aa14.07□□□□□ -0.16
ABCA3-201ENST00000301732 TPD52P55327 224 aaPredicted RBP14.07□□□□□ -0.16
ABCA3-201ENST00000301732 CKAP4Q07065 602 aaKnown RBP14.07□□□□□ -0.16
ABCA3-201ENST00000301732 FAM173BQ6P4H8 233 aa14.07□□□□□ -0.16
ABCA3-201ENST00000301732 MFSD6Q6ZSS7 791 aa14.07□□□□□ -0.16
ABCA3-201ENST00000301732 SEC62Q99442 399 aaKnown RBP14.07□□□□□ -0.16
ABCA3-201ENST00000301732 TTF1Q15361 905 aaPredicted RBP14.07□□□□□ -0.16
ABCA3-201ENST00000301732 LRRC43Q8N309 656 aa14.07□□□□□ -0.16
ABCA3-201ENST00000301732 TMOD2Q9NZR1 351 aa14.07□□□□□ -0.16
ABCA3-201ENST00000301732 ARHGAP5Q13017 1502 aa14.07□□□□□ -0.16
ABCA3-201ENST00000301732 FCHSD2O94868 740 aa14.07□□□□□ -0.16
ABCA3-201ENST00000301732 CALM1P0DP23 149 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms