RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 NYAP1Q6ZVC0 841 aa5.64□□□□□ -1.51
ZNF560-201ENST00000301480 RBM46Q8TBY0 533 aaKnown RBP5.64□□□□□ -1.51
ZNF560-201ENST00000301480 SMARCC1Q92922 1105 aaPredicted RBP5.64□□□□□ -1.51
ZNF560-201ENST00000301480 SGIP1Q9BQI5 828 aa5.64□□□□□ -1.51
ZNF560-201ENST00000301480 CGNQ9P2M7 1197 aaKnown RBP5.64□□□□□ -1.51
ZNF560-201ENST00000301480 CIZ1Q9ULV3 898 aaPredicted RBP5.64□□□□□ -1.51
ZNF560-201ENST00000301480 SYNPO2Q9UMS6 1093 aa5.64□□□□□ -1.51
ZNF560-201ENST00000301480 COMMD10Q9Y6G5 202 aa5.64□□□□□ -1.51
ZNF560-201ENST00000301480 FLT4P35916 1363 aa5.64□□□□□ -1.51
ZNF560-201ENST00000301480 YY1P25490 414 aa5.63□□□□□ -1.51
ZNF560-201ENST00000301480 AMPHP49418 695 aa5.63□□□□□ -1.51
ZNF560-201ENST00000301480 GTPBP4Q9BZE4 634 aaKnown RBP5.63□□□□□ -1.51
ZNF560-201ENST00000301480 FBXO9Q9UK97 447 aaPredicted RBP5.63□□□□□ -1.51
ZNF560-201ENST00000301480 NCAPD2Q15021 1401 aa5.63□□□□□ -1.51
ZNF560-201ENST00000301480 ERICH4A6NGS2 130 aa5.63□□□□□ -1.51
ZNF560-201ENST00000301480 RBM5P52756 815 aaKnown RBP eCLIP5.63□□□□□ -1.51
ZNF560-201ENST00000301480 LRRC27Q9C0I9 530 aa5.63□□□□□ -1.51
ZNF560-201ENST00000301480 NBPF3Q9H094 633 aa5.63□□□□□ -1.51
ZNF560-201ENST00000301480 LTN1O94822 1766 aa5.63□□□□□ -1.51
ZNF560-201ENST00000301480 ST20-MTHFSA0A0A6YYL1 179 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 C7P10643 843 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 TATP17735 454 aaPredicted RBP5.62□□□□□ -1.51
ZNF560-201ENST00000301480 C4orf46Q504U0 113 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 C1orf131Q8NDD1 294 aaKnown RBP5.62□□□□□ -1.51
ZNF560-201ENST00000301480 RAPGEF4Q8WZA2 1011 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 SLC39A7Q92504 469 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 RANBP17Q9H2T7 1088 aaKnown RBP5.62□□□□□ -1.51
ZNF560-201ENST00000301480 DIS3Q9Y2L1 958 aaKnown RBP5.62□□□□□ -1.51
ZNF560-201ENST00000301480 MAP3K19Q56UN5 1328 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 PCDH11XQ9BZA7 1347 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 PCDH11YQ9BZA8 1340 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 USP47Q96K76 1375 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 SPDYE4A6NLX3 237 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 GRIN3BO60391 1043 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 ZNF853P0CG23 659 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 U2AF1L5P0DN76 240 aaPredicted RBP5.62□□□□□ -1.51
ZNF560-201ENST00000301480 COPB2P35606 906 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 TERF1P54274 439 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 U2AF1Q01081 240 aaKnown RBP eCLIP5.62□□□□□ -1.51
ZNF560-201ENST00000301480 NKX1-1Q15270 411 aaPredicted RBP5.62□□□□□ -1.51
ZNF560-201ENST00000301480 E2F5Q15329 346 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 MIER1Q8N108 512 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 FAM210AQ96ND0 272 aa5.62□□□□□ -1.51
ZNF560-201ENST00000301480 GOLGA6L3A6NEY3 463 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 ICE2Q659A1 982 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 CXorf56Q9H5V9 222 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 FYB1O15117 783 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 GALR2O43603 387 aaPredicted RBP5.61□□□□□ -1.51
ZNF560-201ENST00000301480 SKILP12757 684 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 HMGN5P82970 282 aaKnown RBP5.61□□□□□ -1.51
ZNF560-201ENST00000301480 DUSP27Q5VZP5 1158 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 SKAP1Q86WV1 359 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 HSCBQ8IWL3 235 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 ENOX1Q8TC92 643 aaKnown RBP5.61□□□□□ -1.51
ZNF560-201ENST00000301480 SYT17Q9BSW7 474 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 RGPD5Q99666 1765 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 PPP1R12AO14974 1030 aaPredicted RBP5.61□□□□□ -1.51
ZNF560-201ENST00000301480 HSP90AB1P08238 724 aaKnown RBP5.61□□□□□ -1.51
ZNF560-201ENST00000301480 FLT3P36888 993 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 CD151P48509 253 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 C16orf87Q6PH81 154 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 RSPH1Q8WYR4 309 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 MKRN1Q9UHC7 482 aaKnown RBP5.61□□□□□ -1.51
ZNF560-201ENST00000301480 WWC3Q9ULE0 1092 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 ISY1Q9ULR0 285 aaKnown RBP5.61□□□□□ -1.51
ZNF560-201ENST00000301480 SPG7Q9UQ90 795 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 CD2APQ9Y5K6 639 aa5.61□□□□□ -1.51
ZNF560-201ENST00000301480 BTAF1O14981 1849 aa5.6□□□□□ -1.51
ZNF560-201ENST00000301480 LY75O60449 1722 aa5.6□□□□□ -1.51
ZNF560-201ENST00000301480 HMGB1P1B2RPK0 211 aaPredicted RBP5.6□□□□□ -1.51
ZNF560-201ENST00000301480 TGFB3P10600 412 aa5.6□□□□□ -1.51
ZNF560-201ENST00000301480 C22orf23Q9BZE7 217 aa5.6□□□□□ -1.51
ZNF560-201ENST00000301480 SUDS3Q9H7L9 328 aaPredicted RBP5.6□□□□□ -1.51
ZNF560-201ENST00000301480 SMC4Q9NTJ3 1288 aa5.6□□□□□ -1.51
ZNF560-201ENST00000301480 CHPF2Q9P2E5 772 aa5.6□□□□□ -1.51
ZNF560-201ENST00000301480 TRIM6-TRIM34B2RNG4 842 aa5.6□□□□□ -1.51
ZNF560-201ENST00000301480 BIRC2Q13490 618 aa5.6□□□□□ -1.51
ZNF560-201ENST00000301480 DNAJC21Q5F1R6 531 aaKnown RBP5.6□□□□□ -1.51
ZNF560-201ENST00000301480 TRIM34Q9BYJ4 488 aa5.6□□□□□ -1.51
ZNF560-201ENST00000301480 SCUBE2Q9NQ36 999 aa5.6□□□□□ -1.51
ZNF560-201ENST00000301480 IQSEC3Q9UPP2 1182 aaPredicted RBP5.6□□□□□ -1.51
ZNF560-201ENST00000301480 IPO7O95373 1038 aaKnown RBP5.59□□□□□ -1.51
ZNF560-201ENST00000301480 HSP90AB2PQ58FF8 381 aa5.59□□□□□ -1.51
ZNF560-201ENST00000301480 NCAPGQ9BPX3 1015 aa5.59□□□□□ -1.51
ZNF560-201ENST00000301480 FHDC1Q9C0D6 1143 aaPredicted RBP5.59□□□□□ -1.51
ZNF560-201ENST00000301480 SYNRGQ9UMZ2 1314 aa5.59□□□□□ -1.51
ZNF560-201ENST00000301480 ANKRD26Q9UPS8 1709 aa5.59□□□□□ -1.51
ZNF560-201ENST00000301480 MYOM1P52179 1685 aa5.59□□□□□ -1.51
ZNF560-201ENST00000301480 KIF16BQ96L93 1317 aa5.59□□□□□ -1.52
ZNF560-201ENST00000301480 KLHL33A6NCF5 533 aa5.59□□□□□ -1.52
ZNF560-201ENST00000301480 ZBTB7AO95365 584 aa5.59□□□□□ -1.52
ZNF560-201ENST00000301480 ABCD1P33897 745 aa5.59□□□□□ -1.52
ZNF560-201ENST00000301480 SKIV2LQ15477 1246 aaKnown RBP5.59□□□□□ -1.52
ZNF560-201ENST00000301480 CCDC70Q6NSX1 233 aa5.59□□□□□ -1.52
ZNF560-201ENST00000301480 SEZ6LQ9BYH1 1024 aa5.59□□□□□ -1.52
ZNF560-201ENST00000301480 RSPH9Q9H1X1 276 aaPredicted RBP5.59□□□□□ -1.52
ZNF560-201ENST00000301480 TFCP2L1Q9NZI6 479 aa5.59□□□□□ -1.52
ZNF560-201ENST00000301480 CCNL1Q9UK58 526 aaPredicted RBP5.59□□□□□ -1.52
ZNF560-201ENST00000301480 ZNF831Q5JPB2 1677 aa5.58□□□□□ -1.52
ZNF560-201ENST00000301480 MEGF6O75095 1541 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms