RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 MYH3P11055 1940 aa19.19■□□□□ 0.66
HERPUD1-201ENST00000300302 TNNI3KQ59H18 835 aa19.19■□□□□ 0.66
HERPUD1-201ENST00000300302 SYNE4Q8N205 404 aa19.19■□□□□ 0.66
HERPUD1-201ENST00000300302 TTLL11Q8NHH1 800 aa19.19■□□□□ 0.66
HERPUD1-201ENST00000300302 FPGT-TNNI3KV9GXZ4 949 aa19.19■□□□□ 0.66
HERPUD1-201ENST00000300302 HMGB2P26583 209 aaKnown RBP19.18■□□□□ 0.66
HERPUD1-201ENST00000300302 ATG9AQ7Z3C6 839 aa19.18■□□□□ 0.66
HERPUD1-201ENST00000300302 CCDC8Q9H0W5 538 aaPredicted RBP19.18■□□□□ 0.66
HERPUD1-201ENST00000300302 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.18■□□□□ 0.66
HERPUD1-201ENST00000300302 RBM25P49756 843 aaKnown RBP19.18■□□□□ 0.66
HERPUD1-201ENST00000300302 GPR108Q9NPR9 543 aa19.18■□□□□ 0.66
HERPUD1-201ENST00000300302 LRRC4BQ9NT99 713 aa19.18■□□□□ 0.66
HERPUD1-201ENST00000300302 DAXXQ9UER7 740 aaPredicted RBP19.18■□□□□ 0.66
HERPUD1-201ENST00000300302 NARFQ9UHQ1 456 aa19.18■□□□□ 0.66
HERPUD1-201ENST00000300302 SCN7AQ01118 1682 aa19.17■□□□□ 0.66
HERPUD1-201ENST00000300302 C4BP0C0L5 1744 aa19.17■□□□□ 0.66
HERPUD1-201ENST00000300302 ANKRD18BA2A2Z9 1011 aa19.17■□□□□ 0.66
HERPUD1-201ENST00000300302 ZPR1O75312 459 aa19.17■□□□□ 0.66
HERPUD1-201ENST00000300302 REC8O95072 547 aa19.17■□□□□ 0.66
HERPUD1-201ENST00000300302 SMIM5Q71RC9 77 aa19.17■□□□□ 0.66
HERPUD1-201ENST00000300302 ZNF594Q96JF6 807 aaPredicted RBP19.17■□□□□ 0.66
HERPUD1-201ENST00000300302 SLC27A3Q5K4L6 730 aa19.16■□□□□ 0.66
HERPUD1-201ENST00000300302 AK9Q5TCS8 1911 aa19.16■□□□□ 0.66
HERPUD1-201ENST00000300302 APBA3O96018 575 aa19.16■□□□□ 0.66
HERPUD1-201ENST00000300302 ITGA6P23229 1130 aa19.16■□□□□ 0.66
HERPUD1-201ENST00000300302 CCDC85AQ96PX6 553 aaPredicted RBP19.16■□□□□ 0.66
HERPUD1-201ENST00000300302 FAM177BA6PVY3 158 aa19.15■□□□□ 0.66
HERPUD1-201ENST00000300302 NTSR2O95665 410 aa19.15■□□□□ 0.66
HERPUD1-201ENST00000300302 CHMLP26374 656 aa19.15■□□□□ 0.66
HERPUD1-201ENST00000300302 LRRC24Q50LG9 513 aa19.15■□□□□ 0.66
HERPUD1-201ENST00000300302 GREM2Q9H772 168 aa19.15■□□□□ 0.66
HERPUD1-201ENST00000300302 TLR7Q9NYK1 1049 aaKnown RBP19.15■□□□□ 0.66
HERPUD1-201ENST00000300302 CEP126Q9P2H0 1117 aa19.14■□□□□ 0.65
HERPUD1-201ENST00000300302 MAP4K4O95819 1239 aaPredicted RBP19.14■□□□□ 0.65
HERPUD1-201ENST00000300302 TRAPPC3LQ5T215 181 aa19.14■□□□□ 0.65
HERPUD1-201ENST00000300302 USPL1Q5W0Q7 1092 aa19.14■□□□□ 0.65
HERPUD1-201ENST00000300302 EVI5LQ96CN4 794 aa19.14■□□□□ 0.65
HERPUD1-201ENST00000300302 DBNLQ9UJU6 430 aaKnown RBP19.14■□□□□ 0.65
HERPUD1-201ENST00000300302 BECN1Q14457 450 aa19.13■□□□□ 0.65
HERPUD1-201ENST00000300302 PROM2Q8N271 834 aa19.13■□□□□ 0.65
HERPUD1-201ENST00000300302 ESYT1Q9BSJ8 1104 aa19.13■□□□□ 0.65
HERPUD1-201ENST00000300302 PUS3Q9BZE2 481 aaKnown RBP19.13■□□□□ 0.65
HERPUD1-201ENST00000300302 AKAP2Q9Y2D5 859 aa19.13■□□□□ 0.65
HERPUD1-201ENST00000300302 LAMB2P55268 1798 aa19.12■□□□□ 0.65
HERPUD1-201ENST00000300302 HCLS1P14317 486 aaPredicted RBP19.12■□□□□ 0.65
HERPUD1-201ENST00000300302 ADRA2BP18089 450 aa19.12■□□□□ 0.65
HERPUD1-201ENST00000300302 LDHAL6AQ6ZMR3 332 aa19.12■□□□□ 0.65
HERPUD1-201ENST00000300302 AMIGO3Q86WK7 504 aa19.12■□□□□ 0.65
HERPUD1-201ENST00000300302 ARHGEF1Q92888 912 aaKnown RBP19.12■□□□□ 0.65
HERPUD1-201ENST00000300302 ATP5JP18859 108 aa19.11■□□□□ 0.65
HERPUD1-201ENST00000300302 RFC4P35249 363 aa19.11■□□□□ 0.65
HERPUD1-201ENST00000300302 TXNRD1Q16881 649 aa19.11■□□□□ 0.65
HERPUD1-201ENST00000300302 CCDC152Q4G0S7 254 aa19.11■□□□□ 0.65
HERPUD1-201ENST00000300302 ERICH6Q7L0X2 663 aa19.11■□□□□ 0.65
HERPUD1-201ENST00000300302 NYXQ9GZU5 481 aa19.11■□□□□ 0.65
HERPUD1-201ENST00000300302 DDX60Q8IY21 1712 aaKnown RBP19.11■□□□□ 0.65
HERPUD1-201ENST00000300302 TBC1D9BQ66K14 1250 aa19.11■□□□□ 0.65
HERPUD1-201ENST00000300302 NEUROD6Q96NK8 337 aa19.11■□□□□ 0.65
HERPUD1-201ENST00000300302 SETDB2Q96T68 719 aa19.11■□□□□ 0.65
HERPUD1-201ENST00000300302 USP26Q9BXU7 913 aa19.11■□□□□ 0.65
HERPUD1-201ENST00000300302 BCL2L12Q9HB09 334 aa19.11■□□□□ 0.65
HERPUD1-201ENST00000300302 ZNF609O15014 1411 aa19.1■□□□□ 0.65
HERPUD1-201ENST00000300302 DBNDD2Q9BQY9 259 aa19.1■□□□□ 0.65
HERPUD1-201ENST00000300302 CNNM1Q9NRU3 951 aa19.1■□□□□ 0.65
HERPUD1-201ENST00000300302 SRP68Q9UHB9 627 aaKnown RBP19.1■□□□□ 0.65
HERPUD1-201ENST00000300302 GTF2E1P29083 439 aaPredicted RBP19.09■□□□□ 0.65
HERPUD1-201ENST00000300302 BICDL1Q6ZP65 573 aa19.09■□□□□ 0.65
HERPUD1-201ENST00000300302 BOLA2Q9H3K6 86 aa19.09■□□□□ 0.65
HERPUD1-201ENST00000300302 RTL9Q8NET4 1388 aa19.09■□□□□ 0.65
HERPUD1-201ENST00000300302 A0A1B0GUL7 405 aa19.09■□□□□ 0.65
HERPUD1-201ENST00000300302 HIP1O00291 1037 aa19.09■□□□□ 0.65
HERPUD1-201ENST00000300302 PLSCR1O15162 318 aa19.09■□□□□ 0.65
HERPUD1-201ENST00000300302 PHF14O94880 888 aa19.09■□□□□ 0.65
HERPUD1-201ENST00000300302 METTL24Q5JXM2 366 aa19.09■□□□□ 0.65
HERPUD1-201ENST00000300302 RUFY2Q8WXA3 655 aa19.09■□□□□ 0.65
HERPUD1-201ENST00000300302 RIPOR2Q9Y4F9 1068 aa19.09■□□□□ 0.65
HERPUD1-201ENST00000300302 C4AP0C0L4 1744 aa19.08■□□□□ 0.65
HERPUD1-201ENST00000300302 TIMM10P62072 90 aa19.08■□□□□ 0.65
HERPUD1-201ENST00000300302 DIAPH3Q9NSV4 1193 aa19.08■□□□□ 0.65
HERPUD1-201ENST00000300302 EPB41L2O43491 1005 aaKnown RBP19.07■□□□□ 0.64
HERPUD1-201ENST00000300302 ERFEQ4G0M1 354 aa19.07■□□□□ 0.64
HERPUD1-201ENST00000300302 NBPF5PQ86XG9 351 aaPredicted RBP19.07■□□□□ 0.64
HERPUD1-201ENST00000300302 MPHOSPH8Q99549 860 aa19.07■□□□□ 0.64
HERPUD1-201ENST00000300302 COL24A1Q17RW2 1714 aa19.06■□□□□ 0.64
HERPUD1-201ENST00000300302 MROH5Q6ZUA9 1318 aa19.06■□□□□ 0.64
HERPUD1-201ENST00000300302 SSFA2P28290 1259 aa19.06■□□□□ 0.64
HERPUD1-201ENST00000300302 TPTE2Q6XPS3 522 aa19.06■□□□□ 0.64
HERPUD1-201ENST00000300302 HAUS7Q99871 368 aa19.06■□□□□ 0.64
HERPUD1-201ENST00000300302 ANO2Q9NQ90 1003 aa19.06■□□□□ 0.64
HERPUD1-201ENST00000300302 LRP5O75197 1615 aa19.06■□□□□ 0.64
HERPUD1-201ENST00000300302 RIC1Q4ADV7 1423 aa19.06■□□□□ 0.64
HERPUD1-201ENST00000300302 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.05■□□□□ 0.64
HERPUD1-201ENST00000300302 SLC10A5Q5PT55 438 aa19.05■□□□□ 0.64
HERPUD1-201ENST00000300302 UBR3Q6ZT12 1888 aa19.05■□□□□ 0.64
HERPUD1-201ENST00000300302 MCCP23508 829 aa19.05■□□□□ 0.64
HERPUD1-201ENST00000300302 IGHMBP2P38935 993 aaKnown RBP19.05■□□□□ 0.64
HERPUD1-201ENST00000300302 CCDC158Q5M9N0 1113 aa19.05■□□□□ 0.64
HERPUD1-201ENST00000300302 GORABQ5T7V8 394 aa19.05■□□□□ 0.64
HERPUD1-201ENST00000300302 FSD1Q9BTV5 496 aa19.05■□□□□ 0.64
HERPUD1-201ENST00000300302 SGSM2O43147 1006 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms