RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 COPS6Q7L5N1 327 aa17.77■□□□□ 0.44
FNDC1-201ENST00000297267 FAM212AQ96EL1 285 aa17.77■□□□□ 0.44
FNDC1-201ENST00000297267 RBM26Q5T8P6 1007 aaKnown RBP17.77■□□□□ 0.43
FNDC1-201ENST00000297267 ALG1Q9BT22 464 aa17.76■□□□□ 0.43
FNDC1-201ENST00000297267 SLC52A1Q9NWF4 448 aa17.76■□□□□ 0.43
FNDC1-201ENST00000297267 PLEKHH2Q8IVE3 1493 aa17.76■□□□□ 0.43
FNDC1-201ENST00000297267 SP4Q02446 784 aa17.76■□□□□ 0.43
FNDC1-201ENST00000297267 RHPN1Q8TCX5 695 aa17.76■□□□□ 0.43
FNDC1-201ENST00000297267 SCAND2PQ9GZW5 306 aaPredicted RBP17.76■□□□□ 0.43
FNDC1-201ENST00000297267 HYPKQ9NX55 129 aa17.76■□□□□ 0.43
FNDC1-201ENST00000297267 SHTN1A0MZ66 631 aa17.76■□□□□ 0.43
FNDC1-201ENST00000297267 NCAPD3P42695 1498 aa17.76■□□□□ 0.43
FNDC1-201ENST00000297267 THOC2Q8NI27 1593 aaKnown RBP17.76■□□□□ 0.43
FNDC1-201ENST00000297267 LONRF3Q496Y0 759 aa17.76■□□□□ 0.43
FNDC1-201ENST00000297267 CYP7A1P22680 504 aa17.76■□□□□ 0.43
FNDC1-201ENST00000297267 PHAXQ9H814 394 aaKnown RBP17.76■□□□□ 0.43
FNDC1-201ENST00000297267 DACT1Q9NYF0 836 aa17.76■□□□□ 0.43
FNDC1-201ENST00000297267 DBF4Q9UBU7 674 aaPredicted RBP17.76■□□□□ 0.43
FNDC1-201ENST00000297267 MCM6Q14566 821 aa17.76■□□□□ 0.43
FNDC1-201ENST00000297267 DNAI1Q9UI46 699 aa17.76■□□□□ 0.43
FNDC1-201ENST00000297267 SH2B1Q9NRF2 756 aaPredicted RBP17.75■□□□□ 0.43
FNDC1-201ENST00000297267 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
FNDC1-201ENST00000297267 YEATS4O95619 227 aa17.75■□□□□ 0.43
FNDC1-201ENST00000297267 NGLY1Q96IV0 654 aa17.75■□□□□ 0.43
FNDC1-201ENST00000297267 TRIM47Q96LD4 638 aa17.75■□□□□ 0.43
FNDC1-201ENST00000297267 CTNNA2P26232 953 aa17.75■□□□□ 0.43
FNDC1-201ENST00000297267 LMOD1P29536 600 aaPredicted RBP17.75■□□□□ 0.43
FNDC1-201ENST00000297267 MCM7P33993 719 aa17.75■□□□□ 0.43
FNDC1-201ENST00000297267 RNASE9P60153 205 aaKnown RBP17.75■□□□□ 0.43
FNDC1-201ENST00000297267 BICD1Q96G01 975 aa17.75■□□□□ 0.43
FNDC1-201ENST00000297267 LRSAM1Q6UWE0 723 aa17.75■□□□□ 0.43
FNDC1-201ENST00000297267 MRPL50Q8N5N7 158 aaKnown RBP17.75■□□□□ 0.43
FNDC1-201ENST00000297267 CCDC141Q6ZP82 1450 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 CALM1P0DP23 149 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 CALM2P0DP24 149 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 CALM3P0DP25 149 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 SYKP43405 635 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 TFCP2Q12800 502 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 LZTFL1Q9NQ48 299 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 NCOA1Q15788 1441 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 PHACTR2O75167 634 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 ZRSR2Q15696 482 aaKnown RBP17.74■□□□□ 0.43
FNDC1-201ENST00000297267 STAC3Q96MF2 364 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 CUL5Q93034 780 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 ZNF652Q9Y2D9 606 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 IFIT1BQ5T764 474 aaKnown RBP17.74■□□□□ 0.43
FNDC1-201ENST00000297267 IQGAP2Q13576 1575 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 AK2P54819 239 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 KCNH5Q8NCM2 988 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 TMOD2Q9NZR1 351 aa17.74■□□□□ 0.43
FNDC1-201ENST00000297267 TSPY3P0CV98 308 aa17.73■□□□□ 0.43
FNDC1-201ENST00000297267 TSPY8P0CW00 308 aa17.73■□□□□ 0.43
FNDC1-201ENST00000297267 EIF6P56537 245 aaKnown RBP17.73■□□□□ 0.43
FNDC1-201ENST00000297267 MAGEB6Q8N7X4 407 aa17.73■□□□□ 0.43
FNDC1-201ENST00000297267 ESYT1Q9BSJ8 1104 aa17.73■□□□□ 0.43
FNDC1-201ENST00000297267 KIF20AO95235 890 aa17.73■□□□□ 0.43
FNDC1-201ENST00000297267 RHOXF2BP0C7M4 288 aa17.73■□□□□ 0.43
FNDC1-201ENST00000297267 NCOA7Q8NI08 942 aa17.73■□□□□ 0.43
FNDC1-201ENST00000297267 FEZ1Q99689 392 aa17.73■□□□□ 0.43
FNDC1-201ENST00000297267 RHOXF2Q9BQY4 288 aa17.73■□□□□ 0.43
FNDC1-201ENST00000297267 ATP6V1AP38606 617 aa17.73■□□□□ 0.43
FNDC1-201ENST00000297267 FAM160A1Q05DH4 1040 aa17.73■□□□□ 0.43
FNDC1-201ENST00000297267 TMEM266Q2M3C6 531 aa17.73■□□□□ 0.43
FNDC1-201ENST00000297267 UBE2HP62256 183 aa17.72■□□□□ 0.43
FNDC1-201ENST00000297267 DDX17Q92841 729 aaKnown RBP17.72■□□□□ 0.43
FNDC1-201ENST00000297267 MAPK8IP1Q9UQF2 711 aa17.72■□□□□ 0.43
FNDC1-201ENST00000297267 PDE1AP54750 535 aa17.72■□□□□ 0.43
FNDC1-201ENST00000297267 MTHFSDQ2M296 383 aaKnown RBP17.72■□□□□ 0.43
FNDC1-201ENST00000297267 ANKRD18AQ8IVF6 992 aa17.72■□□□□ 0.43
FNDC1-201ENST00000297267 GIMAP7Q8NHV1 300 aa17.72■□□□□ 0.43
FNDC1-201ENST00000297267 CFAP65Q6ZU64 1925 aaKnown RBP17.72■□□□□ 0.43
FNDC1-201ENST00000297267 STAT6P42226 847 aa17.72■□□□□ 0.43
FNDC1-201ENST00000297267 FAM173BQ6P4H8 233 aa17.72■□□□□ 0.43
FNDC1-201ENST00000297267 N4BP3O15049 544 aa17.72■□□□□ 0.43
FNDC1-201ENST00000297267 NFATC2IPQ8NCF5 419 aa17.72■□□□□ 0.43
FNDC1-201ENST00000297267 CALML4Q96GE6 196 aa17.72■□□□□ 0.43
FNDC1-201ENST00000297267 PTPRCP08575 1304 aa17.72■□□□□ 0.43
FNDC1-201ENST00000297267 ADGRL1O94910 1474 aa17.71■□□□□ 0.43
FNDC1-201ENST00000297267 EXOC1Q9NV70 894 aa17.71■□□□□ 0.43
FNDC1-201ENST00000297267 MSH6P52701 1360 aa17.71■□□□□ 0.43
FNDC1-201ENST00000297267 PPP1R12BO60237 982 aaPredicted RBP17.71■□□□□ 0.43
FNDC1-201ENST00000297267 WTAPQ15007 396 aa17.71■□□□□ 0.43
FNDC1-201ENST00000297267 TNIP1Q15025 636 aa17.71■□□□□ 0.43
FNDC1-201ENST00000297267 LMBR1LQ6UX01 489 aa17.71■□□□□ 0.43
FNDC1-201ENST00000297267 G2E3Q7L622 706 aa17.71■□□□□ 0.43
FNDC1-201ENST00000297267 PHACTR3Q96KR7 559 aa17.71■□□□□ 0.43
FNDC1-201ENST00000297267 BICC1Q9H694 974 aaKnown RBP17.71■□□□□ 0.43
FNDC1-201ENST00000297267 GOLGA6L7A0A1B0GV03 622 aa17.71■□□□□ 0.43
FNDC1-201ENST00000297267 MRRFQ96E11 262 aaKnown RBP17.71■□□□□ 0.43
FNDC1-201ENST00000297267 ANKRD13DQ6ZTN6 518 aa17.7■□□□□ 0.42
FNDC1-201ENST00000297267 FERMT2Q96AC1 680 aa17.7■□□□□ 0.42
FNDC1-201ENST00000297267 SKILP12757 684 aa17.7■□□□□ 0.42
FNDC1-201ENST00000297267 NOLC1Q14978 699 aaKnown RBP eCLIP17.7■□□□□ 0.42
FNDC1-201ENST00000297267 KSR1Q8IVT5 923 aa17.7■□□□□ 0.42
FNDC1-201ENST00000297267 RFC4P35249 363 aa17.7■□□□□ 0.42
FNDC1-201ENST00000297267 EXOC5O00471 708 aa17.7■□□□□ 0.42
FNDC1-201ENST00000297267 TRIM21P19474 475 aaKnown RBP17.7■□□□□ 0.42
FNDC1-201ENST00000297267 CCT6AP40227 531 aaKnown RBP17.7■□□□□ 0.42
FNDC1-201ENST00000297267 ZNF594Q96JF6 807 aaPredicted RBP17.7■□□□□ 0.42
FNDC1-201ENST00000297267 ZMYND15Q9H091 742 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms