RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 CTCFLQ8NI51 663 aaPredicted RBP18.53■□□□□ 0.56
ARHGEF28-201ENST00000296794 ACSBG1Q96GR2 724 aa18.53■□□□□ 0.56
ARHGEF28-201ENST00000296794 CCDC144CPQ8IYA2 1237 aa18.52■□□□□ 0.56
ARHGEF28-201ENST00000296794 CABLES1Q8TDN4 633 aa18.52■□□□□ 0.56
ARHGEF28-201ENST00000296794 CCDC171Q6TFL3 1326 aa18.52■□□□□ 0.56
ARHGEF28-201ENST00000296794 IL2RBP14784 551 aa18.52■□□□□ 0.56
ARHGEF28-201ENST00000296794 KCNA6P17658 529 aa18.52■□□□□ 0.56
ARHGEF28-201ENST00000296794 ATP6V1AP38606 617 aa18.52■□□□□ 0.56
ARHGEF28-201ENST00000296794 AK2P54819 239 aa18.52■□□□□ 0.56
ARHGEF28-201ENST00000296794 MICU3Q86XE3 530 aa18.52■□□□□ 0.56
ARHGEF28-201ENST00000296794 ZHX1Q9UKY1 873 aaPredicted RBP18.52■□□□□ 0.56
ARHGEF28-201ENST00000296794 NPC1L1Q9UHC9 1359 aa18.52■□□□□ 0.56
ARHGEF28-201ENST00000296794 UBE2Q2Q8WVN8 375 aa18.52■□□□□ 0.56
ARHGEF28-201ENST00000296794 TAF4BQ92750 862 aa18.52■□□□□ 0.56
ARHGEF28-201ENST00000296794 INTS4Q96HW7 963 aaKnown RBP18.52■□□□□ 0.56
ARHGEF28-201ENST00000296794 NUP88Q99567 741 aaPredicted RBP18.52■□□□□ 0.56
ARHGEF28-201ENST00000296794 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.52■□□□□ 0.56
ARHGEF28-201ENST00000296794 DNMT1P26358 1616 aaKnown RBP18.52■□□□□ 0.55
ARHGEF28-201ENST00000296794 RANBP6O60518 1105 aaKnown RBP18.52■□□□□ 0.55
ARHGEF28-201ENST00000296794 A0A1W2PP64 1363 aa18.52■□□□□ 0.55
ARHGEF28-201ENST00000296794 DNAJC25Q9H1X3 360 aa18.51■□□□□ 0.55
ARHGEF28-201ENST00000296794 SKILP12757 684 aa18.51■□□□□ 0.55
ARHGEF28-201ENST00000296794 PAF1Q8N7H5 531 aa18.51■□□□□ 0.55
ARHGEF28-201ENST00000296794 BLMP54132 1417 aaPredicted RBP18.51■□□□□ 0.55
ARHGEF28-201ENST00000296794 NCOA7Q8NI08 942 aa18.51■□□□□ 0.55
ARHGEF28-201ENST00000296794 RRAGDQ9NQL2 400 aaPredicted RBP18.51■□□□□ 0.55
ARHGEF28-201ENST00000296794 CHMLP26374 656 aa18.51■□□□□ 0.55
ARHGEF28-201ENST00000296794 METAP2P50579 478 aaKnown RBP eCLIP18.51■□□□□ 0.55
ARHGEF28-201ENST00000296794 MTHFSDQ2M296 383 aaKnown RBP18.51■□□□□ 0.55
ARHGEF28-201ENST00000296794 CCDC102BQ68D86 513 aa18.51■□□□□ 0.55
ARHGEF28-201ENST00000296794 SETDB2Q96T68 719 aa18.51■□□□□ 0.55
ARHGEF28-201ENST00000296794 TMEM67Q5HYA8 995 aa18.5■□□□□ 0.55
ARHGEF28-201ENST00000296794 AKAP4Q5JQC9 854 aa18.5■□□□□ 0.55
ARHGEF28-201ENST00000296794 KIAA0556O60303 1618 aa18.5■□□□□ 0.55
ARHGEF28-201ENST00000296794 MAP9Q49MG5 647 aa18.5■□□□□ 0.55
ARHGEF28-201ENST00000296794 CCDC152Q4G0S7 254 aa18.5■□□□□ 0.55
ARHGEF28-201ENST00000296794 ZMYND15Q9H091 742 aa18.5■□□□□ 0.55
ARHGEF28-201ENST00000296794 TTF1Q15361 905 aaPredicted RBP18.5■□□□□ 0.55
ARHGEF28-201ENST00000296794 FKBP15Q5T1M5 1219 aa18.5■□□□□ 0.55
ARHGEF28-201ENST00000296794 BAG3O95817 575 aa18.5■□□□□ 0.55
ARHGEF28-201ENST00000296794 ALDH1L1O75891 902 aa18.49■□□□□ 0.55
ARHGEF28-201ENST00000296794 SEPT11Q9NVA2 429 aaKnown RBP18.49■□□□□ 0.55
ARHGEF28-201ENST00000296794 GOLGA6L9A6NEM1 432 aa18.49■□□□□ 0.55
ARHGEF28-201ENST00000296794 GCP02774 474 aa18.49■□□□□ 0.55
ARHGEF28-201ENST00000296794 TYRO3Q06418 890 aa18.49■□□□□ 0.55
ARHGEF28-201ENST00000296794 LMTK3Q96Q04 1460 aa18.49■□□□□ 0.55
ARHGEF28-201ENST00000296794 KLF18A0A0U1RQI7 1052 aa18.49■□□□□ 0.55
ARHGEF28-201ENST00000296794 NMIQ13287 307 aaPredicted RBP18.49■□□□□ 0.55
ARHGEF28-201ENST00000296794 SPTY2D1Q68D10 685 aaPredicted RBP18.49■□□□□ 0.55
ARHGEF28-201ENST00000296794 Q6ZUG5 572 aa18.49■□□□□ 0.55
ARHGEF28-201ENST00000296794 NLRP3Q96P20 1036 aa18.49■□□□□ 0.55
ARHGEF28-201ENST00000296794 PA2G4Q9UQ80 394 aaKnown RBP18.49■□□□□ 0.55
ARHGEF28-201ENST00000296794 GRM8O00222 908 aa18.48■□□□□ 0.55
ARHGEF28-201ENST00000296794 YEATS4O95619 227 aa18.48■□□□□ 0.55
ARHGEF28-201ENST00000296794 TNIP1Q15025 636 aa18.48■□□□□ 0.55
ARHGEF28-201ENST00000296794 CALCOCO1Q9P1Z2 691 aa18.48■□□□□ 0.55
ARHGEF28-201ENST00000296794 GNG11P61952 73 aa18.48■□□□□ 0.55
ARHGEF28-201ENST00000296794 BMS1Q14692 1282 aaKnown RBP18.48■□□□□ 0.55
ARHGEF28-201ENST00000296794 PAXIP1Q6ZW49 1069 aaPredicted RBP18.48■□□□□ 0.55
ARHGEF28-201ENST00000296794 INSRP06213 1382 aa18.48■□□□□ 0.55
ARHGEF28-201ENST00000296794 SYKP43405 635 aa18.48■□□□□ 0.55
ARHGEF28-201ENST00000296794 MRPS27Q92552 414 aaKnown RBP18.48■□□□□ 0.55
ARHGEF28-201ENST00000296794 ZFYVE9O95405 1425 aa18.48■□□□□ 0.55
ARHGEF28-201ENST00000296794 TTC41PQ6P2S7 1318 aa18.48■□□□□ 0.55
ARHGEF28-201ENST00000296794 OTUD7AQ8TE49 926 aaPredicted RBP18.48■□□□□ 0.55
ARHGEF28-201ENST00000296794 CCDC96Q2M329 555 aa18.47■□□□□ 0.55
ARHGEF28-201ENST00000296794 WDR78Q5VTH9 848 aa18.47■□□□□ 0.55
ARHGEF28-201ENST00000296794 SLC39A6Q13433 755 aa18.47■□□□□ 0.55
ARHGEF28-201ENST00000296794 GTF2F1P35269 517 aaKnown RBP eCLIP18.47■□□□□ 0.55
ARHGEF28-201ENST00000296794 SLC26A6Q9BXS9 759 aa18.47■□□□□ 0.55
ARHGEF28-201ENST00000296794 RBSNQ9H1K0 784 aa18.47■□□□□ 0.55
ARHGEF28-201ENST00000296794 MCM3P25205 808 aa18.47■□□□□ 0.55
ARHGEF28-201ENST00000296794 NLRP5P59047 1200 aa18.47■□□□□ 0.55
ARHGEF28-201ENST00000296794 KSR2Q6VAB6 950 aa18.47■□□□□ 0.55
ARHGEF28-201ENST00000296794 COPS6Q7L5N1 327 aa18.47■□□□□ 0.55
ARHGEF28-201ENST00000296794 KCNG4Q8TDN1 519 aa18.47■□□□□ 0.55
ARHGEF28-201ENST00000296794 XAGE3Q8WTP9 111 aa18.47■□□□□ 0.55
ARHGEF28-201ENST00000296794 MCMDC2Q4G0Z9 681 aa18.46■□□□□ 0.55
ARHGEF28-201ENST00000296794 TAX1BP1Q86VP1 789 aa18.46■□□□□ 0.55
ARHGEF28-201ENST00000296794 AOPEPQ8N6M6 819 aa18.46■□□□□ 0.55
ARHGEF28-201ENST00000296794 MAPK8IP2Q13387 824 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF28-201ENST00000296794 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.46■□□□□ 0.55
ARHGEF28-201ENST00000296794 ABCC2Q92887 1545 aa18.46■□□□□ 0.55
ARHGEF28-201ENST00000296794 SOS1Q07889 1333 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF28-201ENST00000296794 UBASH3AP57075 661 aa18.46■□□□□ 0.55
ARHGEF28-201ENST00000296794 CATIPQ7Z7H3 387 aa18.46■□□□□ 0.55
ARHGEF28-201ENST00000296794 FLT4P35916 1363 aa18.46■□□□□ 0.55
ARHGEF28-201ENST00000296794 CACNA2D4Q7Z3S7 1137 aa18.46■□□□□ 0.55
ARHGEF28-201ENST00000296794 USP8P40818 1118 aa18.46■□□□□ 0.54
ARHGEF28-201ENST00000296794 ANKRD18AQ8IVF6 992 aa18.46■□□□□ 0.54
ARHGEF28-201ENST00000296794 FEZ1Q99689 392 aa18.46■□□□□ 0.54
ARHGEF28-201ENST00000296794 CCDC194A0A1B0GVG4 234 aa18.45■□□□□ 0.54
ARHGEF28-201ENST00000296794 CCDC12Q8WUD4 166 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF28-201ENST00000296794 TRERF1Q96PN7 1200 aa18.45■□□□□ 0.54
ARHGEF28-201ENST00000296794 POTEB2H3BUK9 544 aa18.45■□□□□ 0.54
ARHGEF28-201ENST00000296794 SYT1P21579 422 aa18.45■□□□□ 0.54
ARHGEF28-201ENST00000296794 CREB3L3Q68CJ9 461 aa18.45■□□□□ 0.54
ARHGEF28-201ENST00000296794 ZSWIM4Q9H7M6 989 aa18.45■□□□□ 0.54
ARHGEF28-201ENST00000296794 UQCRFS1P1P0C7P4 283 aa18.45■□□□□ 0.54
ARHGEF28-201ENST00000296794 TRIM35Q9UPQ4 493 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms