RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 UBE3BQ7Z3V4 1068 aa15.32■□□□□ 0.04
HMGB2-201ENST00000296503 GRAPLQ8TC17 118 aaPredicted RBP15.32■□□□□ 0.04
HMGB2-201ENST00000296503 PRELPP51888 382 aa15.31■□□□□ 0.04
HMGB2-201ENST00000296503 CCDC152Q4G0S7 254 aa15.31■□□□□ 0.04
HMGB2-201ENST00000296503 CCDC85AQ96PX6 553 aaPredicted RBP15.31■□□□□ 0.04
HMGB2-201ENST00000296503 PTPRCP08575 1304 aa15.31■□□□□ 0.04
HMGB2-201ENST00000296503 CDHR2Q9BYE9 1310 aa15.31■□□□□ 0.04
HMGB2-201ENST00000296503 FKBP4Q02790 459 aaKnown RBP eCLIP15.31■□□□□ 0.04
HMGB2-201ENST00000296503 SRCIN1Q9C0H9 1055 aa15.31■□□□□ 0.04
HMGB2-201ENST00000296503 ATP6V0A2Q9Y487 856 aa15.31■□□□□ 0.04
HMGB2-201ENST00000296503 ZBED9Q6R2W3 1325 aa15.31■□□□□ 0.04
HMGB2-201ENST00000296503 GRIPAP1Q4V328 841 aa15.3■□□□□ 0.04
HMGB2-201ENST00000296503 SP8Q8IXZ3 490 aa15.3■□□□□ 0.04
HMGB2-201ENST00000296503 GPBP1L1Q9HC44 474 aaPredicted RBP15.3■□□□□ 0.04
HMGB2-201ENST00000296503 C9orf78Q9NZ63 289 aaPredicted RBP15.3■□□□□ 0.04
HMGB2-201ENST00000296503 LTBP3Q9NS15 1303 aa15.3■□□□□ 0.04
HMGB2-201ENST00000296503 DDX60Q8IY21 1712 aaKnown RBP15.29■□□□□ 0.04
HMGB2-201ENST00000296503 LAMB2P55268 1798 aa15.29■□□□□ 0.04
HMGB2-201ENST00000296503 RARSP54136 660 aaKnown RBP15.29■□□□□ 0.04
HMGB2-201ENST00000296503 CELF1Q92879 486 aaKnown RBP15.29■□□□□ 0.04
HMGB2-201ENST00000296503 SEC31BQ9NQW1 1179 aa15.29■□□□□ 0.04
HMGB2-201ENST00000296503 ZNF277Q9NRM2 450 aaPredicted RBP15.29■□□□□ 0.04
HMGB2-201ENST00000296503 SBF1O95248 1867 aa15.29■□□□□ 0.04
HMGB2-201ENST00000296503 ALDH1L1O75891 902 aa15.29■□□□□ 0.04
HMGB2-201ENST00000296503 RPS8P62241 208 aaKnown RBP15.29■□□□□ 0.04
HMGB2-201ENST00000296503 NOB1Q9ULX3 412 aaKnown RBP15.29■□□□□ 0.04
HMGB2-201ENST00000296503 FER1L6Q2WGJ9 1857 aa15.28■□□□□ 0.04
HMGB2-201ENST00000296503 CCDC88AQ3V6T2 1871 aa15.28■□□□□ 0.04
HMGB2-201ENST00000296503 CTSWP56202 376 aa15.28■□□□□ 0.04
HMGB2-201ENST00000296503 TMC4Q7Z404 712 aa15.28■□□□□ 0.04
HMGB2-201ENST00000296503 SLC51AQ86UW1 340 aa15.27■□□□□ 0.04
HMGB2-201ENST00000296503 MPNDQ8N594 471 aa15.27■□□□□ 0.04
HMGB2-201ENST00000296503 TTLL11Q8NHH1 800 aa15.27■□□□□ 0.04
HMGB2-201ENST00000296503 PSMD1Q99460 953 aa15.27■□□□□ 0.04
HMGB2-201ENST00000296503 GRM8O00222 908 aa15.27■□□□□ 0.03
HMGB2-201ENST00000296503 CASP7P55210 303 aa15.27■□□□□ 0.03
HMGB2-201ENST00000296503 TAF1P21675 1872 aa15.26■□□□□ 0.03
HMGB2-201ENST00000296503 IARSP41252 1262 aaKnown RBP15.26■□□□□ 0.03
HMGB2-201ENST00000296503 DPY19L2Q6NUT2 758 aa15.26■□□□□ 0.03
HMGB2-201ENST00000296503 DPP8Q6V1X1 898 aaPredicted RBP15.26■□□□□ 0.03
HMGB2-201ENST00000296503 PLA2G12BQ9BX93 195 aa15.26■□□□□ 0.03
HMGB2-201ENST00000296503 BRPF1P55201 1214 aaPredicted RBP15.25■□□□□ 0.03
HMGB2-201ENST00000296503 ANKRD18AQ8IVF6 992 aa15.25■□□□□ 0.03
HMGB2-201ENST00000296503 CDC5LQ99459 802 aaKnown RBP15.25■□□□□ 0.03
HMGB2-201ENST00000296503 API5Q9BZZ5 524 aaKnown RBP15.25■□□□□ 0.03
HMGB2-201ENST00000296503 GREM2Q9H772 168 aa15.25■□□□□ 0.03
HMGB2-201ENST00000296503 NSFL1CQ9UNZ2 370 aaKnown RBP15.25■□□□□ 0.03
HMGB2-201ENST00000296503 KDM2BQ8NHM5 1336 aa15.25■□□□□ 0.03
HMGB2-201ENST00000296503 ZC3H4Q9UPT8 1303 aaKnown RBP15.25■□□□□ 0.03
HMGB2-201ENST00000296503 SUPT20HQ8NEM7 779 aa15.25■□□□□ 0.03
HMGB2-201ENST00000296503 JDP2Q8WYK2 163 aa15.25■□□□□ 0.03
HMGB2-201ENST00000296503 BCAR3O75815 825 aa15.24■□□□□ 0.03
HMGB2-201ENST00000296503 LARGE2Q8N3Y3 721 aa15.24■□□□□ 0.03
HMGB2-201ENST00000296503 FRAT1Q92837 279 aaPredicted RBP15.24■□□□□ 0.03
HMGB2-201ENST00000296503 CHMP3Q9Y3E7 222 aa15.24■□□□□ 0.03
HMGB2-201ENST00000296503 KIF16BQ96L93 1317 aa15.23■□□□□ 0.03
HMGB2-201ENST00000296503 IPO8O15397 1037 aaKnown RBP15.23■□□□□ 0.03
HMGB2-201ENST00000296503 CSF1RP07333 972 aa15.23■□□□□ 0.03
HMGB2-201ENST00000296503 GLTPD2A6NH11 291 aa15.23■□□□□ 0.03
HMGB2-201ENST00000296503 PPIP5K2O43314 1243 aa15.23■□□□□ 0.03
HMGB2-201ENST00000296503 ITGA6P23229 1130 aa15.23■□□□□ 0.03
HMGB2-201ENST00000296503 FOXO4P98177 505 aa15.23■□□□□ 0.03
HMGB2-201ENST00000296503 RRAGCQ9HB90 399 aa15.23■□□□□ 0.03
HMGB2-201ENST00000296503 C6orf229H3BNL8 230 aa15.22■□□□□ 0.03
HMGB2-201ENST00000296503 NBPF7P0C2Y1 421 aaPredicted RBP15.22■□□□□ 0.03
HMGB2-201ENST00000296503 IGHMBP2P38935 993 aaKnown RBP15.22■□□□□ 0.03
HMGB2-201ENST00000296503 CCT4P50991 539 aaKnown RBP15.22■□□□□ 0.03
HMGB2-201ENST00000296503 GPSM2P81274 684 aa15.22■□□□□ 0.03
HMGB2-201ENST00000296503 LMBR1LQ6UX01 489 aa15.22■□□□□ 0.03
HMGB2-201ENST00000296503 ARHGAP45Q92619 1136 aa15.22■□□□□ 0.03
HMGB2-201ENST00000296503 ANKIB1Q9P2G1 1089 aa15.22■□□□□ 0.03
HMGB2-201ENST00000296503 ANKRD18BA2A2Z9 1011 aa15.21■□□□□ 0.03
HMGB2-201ENST00000296503 AOC3Q16853 763 aa15.21■□□□□ 0.03
HMGB2-201ENST00000296503 FAM161AQ3B820 660 aa15.21■□□□□ 0.03
HMGB2-201ENST00000296503 RTFDC1Q9BY42 306 aaPredicted RBP15.21■□□□□ 0.03
HMGB2-201ENST00000296503 VPS33BQ9H267 617 aa15.21■□□□□ 0.03
HMGB2-201ENST00000296503 NMRK2Q9NPI5 230 aa15.21■□□□□ 0.03
HMGB2-201ENST00000296503 RBM19Q9Y4C8 960 aaKnown RBP15.21■□□□□ 0.03
HMGB2-201ENST00000296503 SNED1Q8TER0 1413 aa15.21■□□□□ 0.03
HMGB2-201ENST00000296503 DICER1Q9UPY3 1922 aaKnown RBP15.21■□□□□ 0.02
HMGB2-201ENST00000296503 IFIT5Q13325 482 aaKnown RBP15.2■□□□□ 0.02
HMGB2-201ENST00000296503 EPHA10Q5JZY3 1008 aa15.2■□□□□ 0.02
HMGB2-201ENST00000296503 SUCLG2Q96I99 432 aa15.2■□□□□ 0.02
HMGB2-201ENST00000296503 MPHOSPH8Q99549 860 aa15.2■□□□□ 0.02
HMGB2-201ENST00000296503 BSDC1Q9NW68 430 aaPredicted RBP15.2■□□□□ 0.02
HMGB2-201ENST00000296503 MYH3P11055 1940 aa15.2■□□□□ 0.02
HMGB2-201ENST00000296503 DDNO94850 711 aaPredicted RBP15.2■□□□□ 0.02
HMGB2-201ENST00000296503 NIM1KQ8IY84 436 aa15.2■□□□□ 0.02
HMGB2-201ENST00000296503 USP44Q9H0E7 712 aa15.2■□□□□ 0.02
HMGB2-201ENST00000296503 RTL9Q8NET4 1388 aa15.2■□□□□ 0.02
HMGB2-201ENST00000296503 UTYO14607 1347 aa15.19■□□□□ 0.02
HMGB2-201ENST00000296503 RIMBP2O15034 1052 aa15.19■□□□□ 0.02
HMGB2-201ENST00000296503 EIF6P56537 245 aaKnown RBP15.19■□□□□ 0.02
HMGB2-201ENST00000296503 WASHC4Q2M389 1173 aa15.19■□□□□ 0.02
HMGB2-201ENST00000296503 CCDC57Q2TAC2 916 aa15.19■□□□□ 0.02
HMGB2-201ENST00000296503 FZD9O00144 591 aa15.18■□□□□ 0.02
HMGB2-201ENST00000296503 NEFLP07196 543 aa15.18■□□□□ 0.02
HMGB2-201ENST00000296503 TAF7LQ5H9L4 462 aa15.18■□□□□ 0.02
HMGB2-201ENST00000296503 ATF7IPQ6VMQ6 1270 aa15.18■□□□□ 0.02
HMGB2-201ENST00000296503 C16orf71Q8IYS4 520 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms