RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 CCDC102AQ96A19 550 aa23.63■■□□□ 1.37
LRPAP1-201ENST00000296325 NLRP3Q96P20 1036 aa23.63■■□□□ 1.37
LRPAP1-201ENST00000296325 TMX4Q9H1E5 349 aaPredicted RBP23.63■■□□□ 1.37
LRPAP1-201ENST00000296325 ZBTB3Q9H5J0 574 aa23.63■■□□□ 1.37
LRPAP1-201ENST00000296325 DUOX1Q9NRD9 1551 aa23.62■■□□□ 1.37
LRPAP1-201ENST00000296325 SP8Q8IXZ3 490 aa23.62■■□□□ 1.37
LRPAP1-201ENST00000296325 MICALL2Q8IY33 904 aa23.62■■□□□ 1.37
LRPAP1-201ENST00000296325 GBA2Q9HCG7 927 aaPredicted RBP23.62■■□□□ 1.37
LRPAP1-201ENST00000296325 MIS18AQ9NYP9 233 aa23.62■■□□□ 1.37
LRPAP1-201ENST00000296325 KDM3BQ7LBC6 1761 aa23.61■■□□□ 1.37
LRPAP1-201ENST00000296325 TRPA1O75762 1119 aa23.61■■□□□ 1.37
LRPAP1-201ENST00000296325 CTU1Q7Z7A3 348 aaKnown RBP23.61■■□□□ 1.37
LRPAP1-201ENST00000296325 MPNDQ8N594 471 aa23.61■■□□□ 1.37
LRPAP1-201ENST00000296325 DPF2Q92785 391 aa23.61■■□□□ 1.37
LRPAP1-201ENST00000296325 RRP7AQ9Y3A4 280 aaKnown RBP23.61■■□□□ 1.37
LRPAP1-201ENST00000296325 H7C1D1 291 aa23.6■■□□□ 1.37
LRPAP1-201ENST00000296325 BBOX1O75936 387 aa23.6■■□□□ 1.37
LRPAP1-201ENST00000296325 PARP10Q53GL7 1025 aa23.6■■□□□ 1.37
LRPAP1-201ENST00000296325 PPP1R42Q7Z4L9 355 aa23.6■■□□□ 1.37
LRPAP1-201ENST00000296325 KRT26Q7Z3Y9 468 aa23.59■■□□□ 1.37
LRPAP1-201ENST00000296325 MKI67P46013 3256 aaKnown RBP23.58■■□□□ 1.37
LRPAP1-201ENST00000296325 EGFRP00533 1210 aa23.58■■□□□ 1.37
LRPAP1-201ENST00000296325 SLC10A3P09131 477 aa23.58■■□□□ 1.37
LRPAP1-201ENST00000296325 EIF4A1P60842 406 aaKnown RBP23.58■■□□□ 1.37
LRPAP1-201ENST00000296325 SAMD7Q7Z3H4 446 aa23.58■■□□□ 1.37
LRPAP1-201ENST00000296325 LRP10Q7Z4F1 713 aa23.58■■□□□ 1.37
LRPAP1-201ENST00000296325 C2orf69Q8N8R5 385 aa23.58■■□□□ 1.37
LRPAP1-201ENST00000296325 CSRNP1Q96S65 589 aa23.58■■□□□ 1.37
LRPAP1-201ENST00000296325 ZBTB12Q9Y330 459 aaPredicted RBP23.58■■□□□ 1.37
LRPAP1-201ENST00000296325 AKAP11Q9UKA4 1901 aa23.58■■□□□ 1.37
LRPAP1-201ENST00000296325 MYL6BP14649 208 aa23.57■■□□□ 1.36
LRPAP1-201ENST00000296325 ZNF157P51786 506 aaPredicted RBP23.57■■□□□ 1.36
LRPAP1-201ENST00000296325 TRIM26Q12899 539 aaPredicted RBP23.57■■□□□ 1.36
LRPAP1-201ENST00000296325 ANKRD36CQ5JPF3 1778 aa23.57■■□□□ 1.36
LRPAP1-201ENST00000296325 POLR2AP24928 1970 aaKnown RBP23.56■■□□□ 1.36
LRPAP1-201ENST00000296325 LAMB2P55268 1798 aa23.56■■□□□ 1.36
LRPAP1-201ENST00000296325 CFAP53Q96M91 514 aa23.56■■□□□ 1.36
LRPAP1-201ENST00000296325 UTP14AQ9BVJ6 771 aaKnown RBP23.56■■□□□ 1.36
LRPAP1-201ENST00000296325 HPS5Q9UPZ3 1129 aa23.56■■□□□ 1.36
LRPAP1-201ENST00000296325 ERBB4Q15303 1308 aa23.56■■□□□ 1.36
LRPAP1-201ENST00000296325 LRRC37AA6NMS7 1700 aa23.56■■□□□ 1.36
LRPAP1-201ENST00000296325 ADM5C9JUS6 153 aa23.55■■□□□ 1.36
LRPAP1-201ENST00000296325 U2AF1L5P0DN76 240 aaPredicted RBP23.55■■□□□ 1.36
LRPAP1-201ENST00000296325 U2AF1Q01081 240 aaKnown RBP eCLIP23.55■■□□□ 1.36
LRPAP1-201ENST00000296325 NUDCQ9Y266 331 aa23.55■■□□□ 1.36
LRPAP1-201ENST00000296325 PSMD14O00487 310 aa23.54■■□□□ 1.36
LRPAP1-201ENST00000296325 PNISRQ8TF01 805 aaKnown RBP23.54■■□□□ 1.36
LRPAP1-201ENST00000296325 TBC1D10BQ4KMP7 808 aaPredicted RBP23.53■■□□□ 1.36
LRPAP1-201ENST00000296325 HTTP42858 3142 aa23.53■■□□□ 1.36
LRPAP1-201ENST00000296325 GRAPQ13588 217 aa23.52■■□□□ 1.36
LRPAP1-201ENST00000296325 GRAPLQ8TC17 118 aaPredicted RBP23.52■■□□□ 1.36
LRPAP1-201ENST00000296325 RPS12P25398 132 aaKnown RBP23.51■■□□□ 1.35
LRPAP1-201ENST00000296325 CNGB1Q14028 1251 aaPredicted RBP23.51■■□□□ 1.35
LRPAP1-201ENST00000296325 PKN2Q16513 984 aaKnown RBP23.51■■□□□ 1.35
LRPAP1-201ENST00000296325 REM2Q8IYK8 340 aaPredicted RBP23.51■■□□□ 1.35
LRPAP1-201ENST00000296325 DCPSQ96C86 337 aaKnown RBP23.51■■□□□ 1.35
LRPAP1-201ENST00000296325 PDIA6Q15084 440 aa23.5■■□□□ 1.35
LRPAP1-201ENST00000296325 RTL9Q8NET4 1388 aa23.5■■□□□ 1.35
LRPAP1-201ENST00000296325 HCLS1P14317 486 aaPredicted RBP23.49■■□□□ 1.35
LRPAP1-201ENST00000296325 DDX46Q7L014 1031 aaKnown RBP23.49■■□□□ 1.35
LRPAP1-201ENST00000296325 TMC4Q7Z404 712 aa23.49■■□□□ 1.35
LRPAP1-201ENST00000296325 RASAL3Q86YV0 1011 aa23.49■■□□□ 1.35
LRPAP1-201ENST00000296325 TAF1P21675 1872 aa23.48■■□□□ 1.35
LRPAP1-201ENST00000296325 DBNDD1Q9H9R9 158 aa23.48■■□□□ 1.35
LRPAP1-201ENST00000296325 WASHC4Q2M389 1173 aa23.47■■□□□ 1.35
LRPAP1-201ENST00000296325 NLRP10Q86W26 655 aa23.47■■□□□ 1.35
LRPAP1-201ENST00000296325 DLG5Q8TDM6 1919 aa23.47■■□□□ 1.35
LRPAP1-201ENST00000296325 KIF4BQ2VIQ3 1234 aa23.46■■□□□ 1.35
LRPAP1-201ENST00000296325 GCC1Q96CN9 775 aa23.46■■□□□ 1.35
LRPAP1-201ENST00000296325 CDCA5Q96FF9 252 aa23.46■■□□□ 1.35
LRPAP1-201ENST00000296325 THUMPD2Q9BTF0 503 aaKnown RBP23.46■■□□□ 1.35
LRPAP1-201ENST00000296325 KCNQ5Q9NR82 932 aa23.46■■□□□ 1.35
LRPAP1-201ENST00000296325 GGA3Q9NZ52 723 aa23.46■■□□□ 1.35
LRPAP1-201ENST00000296325 ASTN2O75129 1339 aaPredicted RBP23.45■■□□□ 1.34
LRPAP1-201ENST00000296325 RBM26Q5T8P6 1007 aaKnown RBP23.45■■□□□ 1.34
LRPAP1-201ENST00000296325 SULF1Q8IWU6 871 aa23.45■■□□□ 1.34
LRPAP1-201ENST00000296325 ZNF296Q8WUU4 475 aaPredicted RBP23.45■■□□□ 1.34
LRPAP1-201ENST00000296325 PROSER3Q2NL68 480 aa23.44■■□□□ 1.34
LRPAP1-201ENST00000296325 NOM1Q5C9Z4 860 aaKnown RBP23.44■■□□□ 1.34
LRPAP1-201ENST00000296325 PCGF6Q9BYE7 350 aa23.44■■□□□ 1.34
LRPAP1-201ENST00000296325 POLLQ9UGP5 575 aa23.44■■□□□ 1.34
LRPAP1-201ENST00000296325 ZNF609O15014 1411 aa23.43■■□□□ 1.34
LRPAP1-201ENST00000296325 PAPPA2Q9BXP8 1791 aa23.43■■□□□ 1.34
LRPAP1-201ENST00000296325 SH3TC1Q8TE82 1336 aa23.43■■□□□ 1.34
LRPAP1-201ENST00000296325 PPP2R1AP30153 589 aa23.43■■□□□ 1.34
LRPAP1-201ENST00000296325 FKBP1BP68106 108 aa23.43■■□□□ 1.34
LRPAP1-201ENST00000296325 SCN9AQ15858 1988 aa23.43■■□□□ 1.34
LRPAP1-201ENST00000296325 DDX60Q8IY21 1712 aaKnown RBP23.42■■□□□ 1.34
LRPAP1-201ENST00000296325 ECE2O60344 883 aa23.42■■□□□ 1.34
LRPAP1-201ENST00000296325 HSP90AB3PQ58FF7 597 aa23.42■■□□□ 1.34
LRPAP1-201ENST00000296325 COL4A1P02462 1669 aa23.41■■□□□ 1.34
LRPAP1-201ENST00000296325 VIL1P09327 827 aaKnown RBP23.41■■□□□ 1.34
LRPAP1-201ENST00000296325 TRMT112Q9UI30 125 aaKnown RBP23.41■■□□□ 1.34
LRPAP1-201ENST00000296325 NSFL1CQ9UNZ2 370 aaKnown RBP23.41■■□□□ 1.34
LRPAP1-201ENST00000296325 CENPFP49454 3210 aa23.41■■□□□ 1.34
LRPAP1-201ENST00000296325 ANXA1P04083 346 aa23.4■■□□□ 1.34
LRPAP1-201ENST00000296325 ZNF280AP59817 542 aaPredicted RBP23.4■■□□□ 1.34
LRPAP1-201ENST00000296325 TCIRG1Q13488 830 aa23.4■■□□□ 1.34
LRPAP1-201ENST00000296325 HABP4Q5JVS0 413 aaKnown RBP23.4■■□□□ 1.34
LRPAP1-201ENST00000296325 FBXO46Q6PJ61 603 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms