RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 DDX46Q7L014 1031 aaKnown RBP20.9■□□□□ 0.94
TMEM41A-201ENST00000296254 GRAPLQ8TC17 118 aaPredicted RBP20.9■□□□□ 0.94
TMEM41A-201ENST00000296254 TRMT112Q9UI30 125 aaKnown RBP20.9■□□□□ 0.94
TMEM41A-201ENST00000296254 TRPM7Q96QT4 1865 aa20.9■□□□□ 0.94
TMEM41A-201ENST00000296254 HSPA8P11142 646 aaKnown RBP20.89■□□□□ 0.93
TMEM41A-201ENST00000296254 GMPSP49915 693 aaPredicted RBP20.89■□□□□ 0.93
TMEM41A-201ENST00000296254 CST9Q5W186 159 aa20.89■□□□□ 0.93
TMEM41A-201ENST00000296254 CCDC146Q8IYE0 955 aa20.89■□□□□ 0.93
TMEM41A-201ENST00000296254 MPNDQ8N594 471 aa20.89■□□□□ 0.93
TMEM41A-201ENST00000296254 CHPF2Q9P2E5 772 aa20.89■□□□□ 0.93
TMEM41A-201ENST00000296254 DDX60Q8IY21 1712 aaKnown RBP20.89■□□□□ 0.93
TMEM41A-201ENST00000296254 NEUROD2Q15784 382 aa20.88■□□□□ 0.93
TMEM41A-201ENST00000296254 CAPNS2Q96L46 248 aa20.88■□□□□ 0.93
TMEM41A-201ENST00000296254 TRIM35Q9UPQ4 493 aa20.88■□□□□ 0.93
TMEM41A-201ENST00000296254 HOXB7P09629 217 aa20.87■□□□□ 0.93
TMEM41A-201ENST00000296254 ECE1P42892 770 aa20.87■□□□□ 0.93
TMEM41A-201ENST00000296254 HDGFL1Q5TGJ6 251 aa20.87■□□□□ 0.93
TMEM41A-201ENST00000296254 CIAPIN1Q6FI81 312 aa20.87■□□□□ 0.93
TMEM41A-201ENST00000296254 TLL2Q9Y6L7 1015 aa20.87■□□□□ 0.93
TMEM41A-201ENST00000296254 CYP4F22Q6NT55 531 aa20.86■□□□□ 0.93
TMEM41A-201ENST00000296254 PAXIP1Q6ZW49 1069 aaPredicted RBP20.86■□□□□ 0.93
TMEM41A-201ENST00000296254 TMC4Q7Z404 712 aa20.86■□□□□ 0.93
TMEM41A-201ENST00000296254 RUNDC1Q96C34 613 aa20.86■□□□□ 0.93
TMEM41A-201ENST00000296254 RAD17O75943 681 aa20.85■□□□□ 0.93
TMEM41A-201ENST00000296254 PLBD2Q8NHP8 589 aa20.85■□□□□ 0.93
TMEM41A-201ENST00000296254 LAS1LQ9Y4W2 734 aaKnown RBP20.85■□□□□ 0.93
TMEM41A-201ENST00000296254 TAF1P21675 1872 aa20.85■□□□□ 0.93
TMEM41A-201ENST00000296254 YDJCA8MPS7 323 aa20.84■□□□□ 0.93
TMEM41A-201ENST00000296254 TNIP1Q15025 636 aa20.84■□□□□ 0.93
TMEM41A-201ENST00000296254 ISCA1Q9BUE6 129 aa20.84■□□□□ 0.93
TMEM41A-201ENST00000296254 GRM1Q13255 1194 aa20.83■□□□□ 0.93
TMEM41A-201ENST00000296254 WDR43Q15061 677 aaKnown RBP eCLIP20.83■□□□□ 0.93
TMEM41A-201ENST00000296254 TRPM4Q8TD43 1214 aa20.83■□□□□ 0.93
TMEM41A-201ENST00000296254 ZC3H15Q8WU90 426 aaKnown RBP20.83■□□□□ 0.93
TMEM41A-201ENST00000296254 ZNF428Q96B54 188 aa20.83■□□□□ 0.93
TMEM41A-201ENST00000296254 GPR101Q96P66 508 aaPredicted RBP20.83■□□□□ 0.93
TMEM41A-201ENST00000296254 BCL2L13Q9BXK5 485 aa20.83■□□□□ 0.93
TMEM41A-201ENST00000296254 GLIS2Q9BZE0 524 aaPredicted RBP20.83■□□□□ 0.93
TMEM41A-201ENST00000296254 DBF4Q9UBU7 674 aaPredicted RBP20.83■□□□□ 0.93
TMEM41A-201ENST00000296254 PGAP2Q9UHJ9 254 aa20.83■□□□□ 0.93
TMEM41A-201ENST00000296254 COL4A1P02462 1669 aa20.83■□□□□ 0.92
TMEM41A-201ENST00000296254 CELF2O95319 508 aaKnown RBP20.82■□□□□ 0.92
TMEM41A-201ENST00000296254 ANKRD13DQ6ZTN6 518 aa20.82■□□□□ 0.92
TMEM41A-201ENST00000296254 SAPCD2Q86UD0 394 aa20.82■□□□□ 0.92
TMEM41A-201ENST00000296254 FAM89AQ96GI7 184 aa20.82■□□□□ 0.92
TMEM41A-201ENST00000296254 HIRAP54198 1017 aaPredicted RBP20.81■□□□□ 0.92
TMEM41A-201ENST00000296254 SF3B3Q15393 1217 aaKnown RBP20.81■□□□□ 0.92
TMEM41A-201ENST00000296254 CELF1Q92879 486 aaKnown RBP20.81■□□□□ 0.92
TMEM41A-201ENST00000296254 DDX10Q13206 875 aaKnown RBP20.8■□□□□ 0.92
TMEM41A-201ENST00000296254 CFAP44Q96MT7 982 aa20.8■□□□□ 0.92
TMEM41A-201ENST00000296254 BEGAINQ9BUH8 593 aa20.8■□□□□ 0.92
TMEM41A-201ENST00000296254 SHTN1A0MZ66 631 aa20.79■□□□□ 0.92
TMEM41A-201ENST00000296254 ATP5J2-PTCD1G3V325 749 aa20.79■□□□□ 0.92
TMEM41A-201ENST00000296254 MAP2K2P36507 400 aa20.79■□□□□ 0.92
TMEM41A-201ENST00000296254 MICALL2Q8IY33 904 aa20.79■□□□□ 0.92
TMEM41A-201ENST00000296254 HHIPL1Q96JK4 782 aa20.79■□□□□ 0.92
TMEM41A-201ENST00000296254 HYPKQ9NX55 129 aa20.79■□□□□ 0.92
TMEM41A-201ENST00000296254 CNOT7Q9UIV1 285 aaKnown RBP20.79■□□□□ 0.92
TMEM41A-201ENST00000296254 ADAMTS8Q9UP79 889 aa20.79■□□□□ 0.92
TMEM41A-201ENST00000296254 AOC2O75106 756 aa20.78■□□□□ 0.92
TMEM41A-201ENST00000296254 WASHC4Q2M389 1173 aa20.78■□□□□ 0.92
TMEM41A-201ENST00000296254 DUSP27Q5VZP5 1158 aa20.78■□□□□ 0.92
TMEM41A-201ENST00000296254 ABHD8Q96I13 439 aa20.78■□□□□ 0.92
TMEM41A-201ENST00000296254 NSFL1CQ9UNZ2 370 aaKnown RBP20.78■□□□□ 0.92
TMEM41A-201ENST00000296254 PSMD14O00487 310 aa20.77■□□□□ 0.92
TMEM41A-201ENST00000296254 TRIM28Q13263 835 aaKnown RBP20.77■□□□□ 0.92
TMEM41A-201ENST00000296254 CDC37L1Q7L3B6 337 aa20.77■□□□□ 0.92
TMEM41A-201ENST00000296254 DPF2Q92785 391 aa20.77■□□□□ 0.92
TMEM41A-201ENST00000296254 DBNDD1Q9H9R9 158 aa20.77■□□□□ 0.92
TMEM41A-201ENST00000296254 MBIPQ9NS73 344 aa20.77■□□□□ 0.92
TMEM41A-201ENST00000296254 ZBTB12Q9Y330 459 aaPredicted RBP20.77■□□□□ 0.92
TMEM41A-201ENST00000296254 H7C1D1 291 aa20.76■□□□□ 0.91
TMEM41A-201ENST00000296254 IRS4O14654 1257 aaPredicted RBP20.76■□□□□ 0.91
TMEM41A-201ENST00000296254 GPSM2P81274 684 aa20.76■□□□□ 0.91
TMEM41A-201ENST00000296254 RTL5Q5HYW3 569 aaPredicted RBP20.76■□□□□ 0.91
TMEM41A-201ENST00000296254 ZNF408Q9H9D4 720 aa20.76■□□□□ 0.91
TMEM41A-201ENST00000296254 POLLQ9UGP5 575 aa20.76■□□□□ 0.91
TMEM41A-201ENST00000296254 RTL9Q8NET4 1388 aa20.74■□□□□ 0.91
TMEM41A-201ENST00000296254 C6orf229H3BNL8 230 aa20.74■□□□□ 0.91
TMEM41A-201ENST00000296254 CA12O43570 354 aa20.74■□□□□ 0.91
TMEM41A-201ENST00000296254 ZNF853P0CG23 659 aa20.74■□□□□ 0.91
TMEM41A-201ENST00000296254 BRPF1P55201 1214 aaPredicted RBP20.74■□□□□ 0.91
TMEM41A-201ENST00000296254 GOLGA2Q08379 1002 aa20.74■□□□□ 0.91
TMEM41A-201ENST00000296254 RIMBP2O15034 1052 aa20.73■□□□□ 0.91
TMEM41A-201ENST00000296254 ECE2O60344 883 aa20.73■□□□□ 0.91
TMEM41A-201ENST00000296254 RPS12P25398 132 aaKnown RBP20.73■□□□□ 0.91
TMEM41A-201ENST00000296254 SAMD7Q7Z3H4 446 aa20.73■□□□□ 0.91
TMEM41A-201ENST00000296254 ZBTB38Q8NAP3 1195 aaPredicted RBP20.73■□□□□ 0.91
TMEM41A-201ENST00000296254 TBC1D16Q8TBP0 767 aa20.73■□□□□ 0.91
TMEM41A-201ENST00000296254 EYA3Q99504 573 aa20.73■□□□□ 0.91
TMEM41A-201ENST00000296254 IFT57Q9NWB7 429 aa20.73■□□□□ 0.91
TMEM41A-201ENST00000296254 TSKSQ9UJT2 592 aa20.73■□□□□ 0.91
TMEM41A-201ENST00000296254 EGFRP00533 1210 aa20.72■□□□□ 0.91
TMEM41A-201ENST00000296254 RPS8P62241 208 aaKnown RBP20.72■□□□□ 0.91
TMEM41A-201ENST00000296254 RIC3Q7Z5B4 369 aa20.72■□□□□ 0.91
TMEM41A-201ENST00000296254 TBC1D10BQ4KMP7 808 aaPredicted RBP20.71■□□□□ 0.91
TMEM41A-201ENST00000296254 USP48Q86UV5 1035 aa20.71■□□□□ 0.91
TMEM41A-201ENST00000296254 PODXL2Q9NZ53 605 aa20.71■□□□□ 0.91
TMEM41A-201ENST00000296254 SCN9AQ15858 1988 aa20.7■□□□□ 0.9
TMEM41A-201ENST00000296254 HSP90B1P14625 803 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms