RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 ZBTB40Q9NUA8 1239 aa19.92■□□□□ 0.78
CDCP1-201ENST00000296129 SIRT1Q96EB6 747 aa19.91■□□□□ 0.78
CDCP1-201ENST00000296129 GSTO1P78417 241 aa19.91■□□□□ 0.78
CDCP1-201ENST00000296129 DDB1Q16531 1140 aa19.91■□□□□ 0.78
CDCP1-201ENST00000296129 Q6ZUG5 572 aa19.91■□□□□ 0.78
CDCP1-201ENST00000296129 PAG1Q9NWQ8 432 aa19.91■□□□□ 0.78
CDCP1-201ENST00000296129 IP6K1Q92551 441 aa19.91■□□□□ 0.78
CDCP1-201ENST00000296129 UTP14AQ9BVJ6 771 aaKnown RBP19.91■□□□□ 0.78
CDCP1-201ENST00000296129 KRT23Q9C075 422 aa19.91■□□□□ 0.78
CDCP1-201ENST00000296129 ANAPC15P60006 121 aa19.9■□□□□ 0.78
CDCP1-201ENST00000296129 CACNA2D4Q7Z3S7 1137 aa19.9■□□□□ 0.78
CDCP1-201ENST00000296129 DZIP3Q86Y13 1208 aaKnown RBP19.9■□□□□ 0.78
CDCP1-201ENST00000296129 ZSCAN16Q9H4T2 348 aaPredicted RBP19.9■□□□□ 0.78
CDCP1-201ENST00000296129 EIF3JO75822 258 aaKnown RBP19.9■□□□□ 0.78
CDCP1-201ENST00000296129 ZSCAN23Q3MJ62 389 aa19.9■□□□□ 0.78
CDCP1-201ENST00000296129 CENPHQ9H3R5 247 aa19.9■□□□□ 0.78
CDCP1-201ENST00000296129 ISM2Q6H9L7 571 aa19.9■□□□□ 0.78
CDCP1-201ENST00000296129 PAF1Q8N7H5 531 aa19.9■□□□□ 0.78
CDCP1-201ENST00000296129 TTC41PQ6P2S7 1318 aa19.89■□□□□ 0.78
CDCP1-201ENST00000296129 CPLX3Q8WVH0 158 aa19.89■□□□□ 0.78
CDCP1-201ENST00000296129 HLA-DOAP06340 250 aa19.89■□□□□ 0.77
CDCP1-201ENST00000296129 NUP88Q99567 741 aaPredicted RBP19.89■□□□□ 0.77
CDCP1-201ENST00000296129 CNPY2Q9Y2B0 182 aa19.89■□□□□ 0.77
CDCP1-201ENST00000296129 KLHL40Q2TBA0 621 aa19.89■□□□□ 0.77
CDCP1-201ENST00000296129 DCAF5Q96JK2 942 aa19.89■□□□□ 0.77
CDCP1-201ENST00000296129 SLC9C2Q5TAH2 1124 aa19.89■□□□□ 0.77
CDCP1-201ENST00000296129 ZBTB43O43298 467 aa19.88■□□□□ 0.77
CDCP1-201ENST00000296129 CASQ1P31415 396 aa19.88■□□□□ 0.77
CDCP1-201ENST00000296129 TFCP2Q12800 502 aa19.88■□□□□ 0.77
CDCP1-201ENST00000296129 CALML4Q96GE6 196 aa19.88■□□□□ 0.77
CDCP1-201ENST00000296129 EHMT1Q9H9B1 1298 aa19.88■□□□□ 0.77
CDCP1-201ENST00000296129 ADCY5O95622 1261 aa19.88■□□□□ 0.77
CDCP1-201ENST00000296129 UBXN4Q92575 508 aa19.88■□□□□ 0.77
CDCP1-201ENST00000296129 C8orf37Q96NL8 207 aa19.88■□□□□ 0.77
CDCP1-201ENST00000296129 TCP11L1Q9NUJ3 509 aa19.88■□□□□ 0.77
CDCP1-201ENST00000296129 KIF2AO00139 706 aaPredicted RBP19.88■□□□□ 0.77
CDCP1-201ENST00000296129 FGFR1OPO95684 399 aaKnown RBP19.88■□□□□ 0.77
CDCP1-201ENST00000296129 SSR1P43307 286 aaKnown RBP19.88■□□□□ 0.77
CDCP1-201ENST00000296129 JAKMIP3Q5VZ66 844 aa19.88■□□□□ 0.77
CDCP1-201ENST00000296129 SMARCC1Q92922 1105 aaPredicted RBP19.88■□□□□ 0.77
CDCP1-201ENST00000296129 EDC4Q6P2E9 1401 aaKnown RBP19.87■□□□□ 0.77
CDCP1-201ENST00000296129 NEFHP12036 1026 aa19.87■□□□□ 0.77
CDCP1-201ENST00000296129 TMC6Q7Z403 805 aa19.87■□□□□ 0.77
CDCP1-201ENST00000296129 BICC1Q9H694 974 aaKnown RBP19.87■□□□□ 0.77
CDCP1-201ENST00000296129 KIF5CO60282 957 aa19.87■□□□□ 0.77
CDCP1-201ENST00000296129 IL13P35225 146 aa19.87■□□□□ 0.77
CDCP1-201ENST00000296129 IFIT1BQ5T764 474 aaKnown RBP19.87■□□□□ 0.77
CDCP1-201ENST00000296129 TSPY3P0CV98 308 aa19.87■□□□□ 0.77
CDCP1-201ENST00000296129 TSPY8P0CW00 308 aa19.87■□□□□ 0.77
CDCP1-201ENST00000296129 ALG1Q9BT22 464 aa19.87■□□□□ 0.77
CDCP1-201ENST00000296129 PLEKHM2Q8IWE5 1019 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 NLRP3Q96P20 1036 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 CNNM2Q9H8M5 875 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 PCDH11XQ9BZA7 1347 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 PCDH11YQ9BZA8 1340 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 GIMAP6Q6P9H5 292 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 TSPYL1Q9H0U9 437 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 STX8Q9UNK0 236 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 CCDC66A2RUB6 948 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 ATP10AO60312 1499 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 ENOX2Q16206 610 aaKnown RBP19.86■□□□□ 0.77
CDCP1-201ENST00000296129 CABP5Q9NP86 173 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 SAMD9Q5K651 1589 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 PRKCSHP14314 528 aaPredicted RBP19.86■□□□□ 0.77
CDCP1-201ENST00000296129 HSPA2P54652 639 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 ESR2Q92731 530 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 SNX21Q969T3 373 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 FEZ1Q99689 392 aa19.86■□□□□ 0.77
CDCP1-201ENST00000296129 TRMT1Q9NXH9 659 aaKnown RBP19.86■□□□□ 0.77
CDCP1-201ENST00000296129 NAA16Q6N069 864 aaPredicted RBP19.85■□□□□ 0.77
CDCP1-201ENST00000296129 TBX22Q9Y458 520 aa19.85■□□□□ 0.77
CDCP1-201ENST00000296129 IBSPP21815 317 aaPredicted RBP19.85■□□□□ 0.77
CDCP1-201ENST00000296129 ZNF165P49910 485 aa19.85■□□□□ 0.77
CDCP1-201ENST00000296129 G2E3Q7L622 706 aa19.85■□□□□ 0.77
CDCP1-201ENST00000296129 TMX1Q9H3N1 280 aa19.85■□□□□ 0.77
CDCP1-201ENST00000296129 UBAP1LF5GYI3 381 aa19.85■□□□□ 0.77
CDCP1-201ENST00000296129 RTN1Q16799 776 aa19.85■□□□□ 0.77
CDCP1-201ENST00000296129 CCDC102BQ68D86 513 aa19.85■□□□□ 0.77
CDCP1-201ENST00000296129 PPP4R3AQ6IN85 833 aa19.85■□□□□ 0.77
CDCP1-201ENST00000296129 IRS4O14654 1257 aaPredicted RBP19.85■□□□□ 0.77
CDCP1-201ENST00000296129 TOM1O60784 492 aa19.85■□□□□ 0.77
CDCP1-201ENST00000296129 SOS1Q07889 1333 aaPredicted RBP19.85■□□□□ 0.77
CDCP1-201ENST00000296129 ZMYM4Q5VZL5 1548 aa19.85■□□□□ 0.77
CDCP1-201ENST00000296129 RNF113AO15541 343 aaKnown RBP19.85■□□□□ 0.77
CDCP1-201ENST00000296129 AMPD3Q01432 767 aa19.85■□□□□ 0.77
CDCP1-201ENST00000296129 USP48Q86UV5 1035 aa19.85■□□□□ 0.77
CDCP1-201ENST00000296129 KIF18AQ8NI77 898 aa19.84■□□□□ 0.77
CDCP1-201ENST00000296129 MTIF2P46199 727 aaKnown RBP19.84■□□□□ 0.77
CDCP1-201ENST00000296129 CCDC102AQ96A19 550 aa19.84■□□□□ 0.77
CDCP1-201ENST00000296129 SBNO1A3KN83 1393 aa19.84■□□□□ 0.77
CDCP1-201ENST00000296129 CHMP4BP1P59074 171 aa19.84■□□□□ 0.77
CDCP1-201ENST00000296129 TTLL12Q14166 644 aaPredicted RBP19.84■□□□□ 0.77
CDCP1-201ENST00000296129 SEPT7Q16181 437 aaKnown RBP19.84■□□□□ 0.77
CDCP1-201ENST00000296129 ZGPATQ8N5A5 531 aaKnown RBP19.84■□□□□ 0.77
CDCP1-201ENST00000296129 SCLT1Q96NL6 688 aa19.84■□□□□ 0.77
CDCP1-201ENST00000296129 F8W031 263 aaPredicted RBP19.84■□□□□ 0.77
CDCP1-201ENST00000296129 URI1O94763 535 aaPredicted RBP19.84■□□□□ 0.77
CDCP1-201ENST00000296129 KIF20AO95235 890 aa19.84■□□□□ 0.77
CDCP1-201ENST00000296129 YEATS4O95619 227 aa19.84■□□□□ 0.77
CDCP1-201ENST00000296129 CEP170Q5SW79 1584 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms