RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 SCAND2PQ9GZW5 306 aaPredicted RBP16.26■□□□□ 0.19
NCSTN-201ENST00000294785 RFX5P48382 616 aaPredicted RBP16.26■□□□□ 0.19
NCSTN-201ENST00000294785 TOB2Q14106 344 aaPredicted RBP16.26■□□□□ 0.19
NCSTN-201ENST00000294785 NFATC2IPQ8NCF5 419 aa16.26■□□□□ 0.19
NCSTN-201ENST00000294785 MEGF6O75095 1541 aa16.26■□□□□ 0.19
NCSTN-201ENST00000294785 CCDC192P0DO97 292 aa16.25■□□□□ 0.19
NCSTN-201ENST00000294785 TNNI3KQ59H18 835 aa16.25■□□□□ 0.19
NCSTN-201ENST00000294785 TTC5Q8N0Z6 440 aa16.25■□□□□ 0.19
NCSTN-201ENST00000294785 PIBF1Q8WXW3 757 aa16.25■□□□□ 0.19
NCSTN-201ENST00000294785 DCAF5Q96JK2 942 aa16.25■□□□□ 0.19
NCSTN-201ENST00000294785 FPGT-TNNI3KV9GXZ4 949 aa16.25■□□□□ 0.19
NCSTN-201ENST00000294785 PTPN12Q05209 780 aaKnown RBP16.25■□□□□ 0.19
NCSTN-201ENST00000294785 EPHA10Q5JZY3 1008 aa16.25■□□□□ 0.19
NCSTN-201ENST00000294785 ZNF496Q96IT1 587 aaPredicted RBP16.25■□□□□ 0.19
NCSTN-201ENST00000294785 TPM3P06753 285 aa16.25■□□□□ 0.19
NCSTN-201ENST00000294785 CDC37L1Q7L3B6 337 aa16.25■□□□□ 0.19
NCSTN-201ENST00000294785 ZNF589Q86UQ0 364 aaPredicted RBP16.25■□□□□ 0.19
NCSTN-201ENST00000294785 KLHDC4Q8TBB5 520 aa16.25■□□□□ 0.19
NCSTN-201ENST00000294785 MAP7D2Q96T17 732 aa16.25■□□□□ 0.19
NCSTN-201ENST00000294785 C19orf44Q9H6X5 657 aa16.25■□□□□ 0.19
NCSTN-201ENST00000294785 NLRP2Q9NX02 1062 aa16.25■□□□□ 0.19
NCSTN-201ENST00000294785 GIMAP6Q6P9H5 292 aa16.24■□□□□ 0.19
NCSTN-201ENST00000294785 FMNL2Q96PY5 1086 aa16.24■□□□□ 0.19
NCSTN-201ENST00000294785 DBNLQ9UJU6 430 aaKnown RBP16.24■□□□□ 0.19
NCSTN-201ENST00000294785 U3KPZ7 1027 aaPredicted RBP16.24■□□□□ 0.19
NCSTN-201ENST00000294785 DYNC1I1O14576 645 aa16.24■□□□□ 0.19
NCSTN-201ENST00000294785 TTC6Q86TZ1 520 aa16.24■□□□□ 0.19
NCSTN-201ENST00000294785 UQCRHLA0A096LP55 91 aa16.23■□□□□ 0.19
NCSTN-201ENST00000294785 UQCRHP07919 91 aa16.23■□□□□ 0.19
NCSTN-201ENST00000294785 DDX54Q8TDD1 881 aaKnown RBP16.23■□□□□ 0.19
NCSTN-201ENST00000294785 ZC3H6P61129 1189 aaKnown RBP16.23■□□□□ 0.19
NCSTN-201ENST00000294785 PROSER2Q86WR7 435 aaPredicted RBP16.23■□□□□ 0.19
NCSTN-201ENST00000294785 GLI3P10071 1580 aa16.22■□□□□ 0.19
NCSTN-201ENST00000294785 TFCP2Q12800 502 aa16.22■□□□□ 0.19
NCSTN-201ENST00000294785 MAP3K11Q16584 847 aa16.22■□□□□ 0.19
NCSTN-201ENST00000294785 GTF3C6Q969F1 213 aa16.22■□□□□ 0.19
NCSTN-201ENST00000294785 NEK1Q96PY6 1258 aa16.22■□□□□ 0.19
NCSTN-201ENST00000294785 HAUS7Q99871 368 aa16.22■□□□□ 0.19
NCSTN-201ENST00000294785 NUP62CLQ9H1M0 184 aa16.22■□□□□ 0.19
NCSTN-201ENST00000294785 DDX19AQ9NUU7 478 aaKnown RBP16.22■□□□□ 0.19
NCSTN-201ENST00000294785 DCCP43146 1447 aa16.21■□□□□ 0.19
NCSTN-201ENST00000294785 MCMDC2Q4G0Z9 681 aa16.21■□□□□ 0.19
NCSTN-201ENST00000294785 MTERF4Q7Z6M4 381 aaKnown RBP16.21■□□□□ 0.19
NCSTN-201ENST00000294785 USP16Q9Y5T5 823 aa16.21■□□□□ 0.19
NCSTN-201ENST00000294785 ZNF609O15014 1411 aa16.21■□□□□ 0.19
NCSTN-201ENST00000294785 SH3TC1Q8TE82 1336 aa16.21■□□□□ 0.19
NCSTN-201ENST00000294785 PLBD2Q8NHP8 589 aa16.21■□□□□ 0.18
NCSTN-201ENST00000294785 FAM200AQ8TCP9 573 aa16.21■□□□□ 0.18
NCSTN-201ENST00000294785 PALLDQ8WX93 1383 aa16.2■□□□□ 0.18
NCSTN-201ENST00000294785 HMGB1P09429 215 aaKnown RBP16.2■□□□□ 0.18
NCSTN-201ENST00000294785 UBE3BQ7Z3V4 1068 aa16.2■□□□□ 0.18
NCSTN-201ENST00000294785 SPATA32Q96LK8 384 aa16.2■□□□□ 0.18
NCSTN-201ENST00000294785 TAF6LQ9Y6J9 622 aa16.2■□□□□ 0.18
NCSTN-201ENST00000294785 SPEF2Q9C093 1822 aa16.2■□□□□ 0.18
NCSTN-201ENST00000294785 GOLGA6L4A6NEF3 574 aa16.2■□□□□ 0.18
NCSTN-201ENST00000294785 GOLGA6L6A8MZA4 724 aa16.2■□□□□ 0.18
NCSTN-201ENST00000294785 CASP7P55210 303 aa16.2■□□□□ 0.18
NCSTN-201ENST00000294785 PRIMPOLQ96LW4 560 aa16.2■□□□□ 0.18
NCSTN-201ENST00000294785 SPTLC3Q9NUV7 552 aa16.2■□□□□ 0.18
NCSTN-201ENST00000294785 MYH15Q9Y2K3 1946 aa16.19■□□□□ 0.18
NCSTN-201ENST00000294785 COL9A3Q14050 684 aaPredicted RBP16.19■□□□□ 0.18
NCSTN-201ENST00000294785 NOLC1Q14978 699 aaKnown RBP eCLIP16.19■□□□□ 0.182e-7■□□□□ 11
NCSTN-201ENST00000294785 TPRNQ4KMQ1 711 aa16.19■□□□□ 0.18
NCSTN-201ENST00000294785 RBM43Q6ZSC3 357 aaKnown RBP16.19■□□□□ 0.18
NCSTN-201ENST00000294785 FERMT3Q86UX7 667 aa16.19■□□□□ 0.18
NCSTN-201ENST00000294785 TCEANC2Q96MN5 208 aa16.19■□□□□ 0.18
NCSTN-201ENST00000294785 ZSCAN16Q9H4T2 348 aaPredicted RBP16.19■□□□□ 0.18
NCSTN-201ENST00000294785 GPR108Q9NPR9 543 aa16.19■□□□□ 0.18
NCSTN-201ENST00000294785 NUP188Q5SRE5 1749 aa16.19■□□□□ 0.18
NCSTN-201ENST00000294785 A0A087WZG4 1122 aa16.19■□□□□ 0.18
NCSTN-201ENST00000294785 HMGN5P82970 282 aaKnown RBP16.19■□□□□ 0.18
NCSTN-201ENST00000294785 LLPHQ9BRT6 129 aaKnown RBP16.19■□□□□ 0.18
NCSTN-201ENST00000294785 LAMA4Q16363 1823 aa16.19■□□□□ 0.18
NCSTN-201ENST00000294785 KBTBD3Q8NAB2 608 aa16.18■□□□□ 0.18
NCSTN-201ENST00000294785 EDC3Q96F86 508 aaKnown RBP16.18■□□□□ 0.18
NCSTN-201ENST00000294785 TMEM94Q12767 1356 aa16.18■□□□□ 0.18
NCSTN-201ENST00000294785 LEO1Q8WVC0 666 aaPredicted RBP16.18■□□□□ 0.18
NCSTN-201ENST00000294785 CYP27B1O15528 508 aa16.18■□□□□ 0.18
NCSTN-201ENST00000294785 DBNDD2Q9BQY9 259 aa16.18■□□□□ 0.18
NCSTN-201ENST00000294785 TNMDQ9H2S6 317 aa16.18■□□□□ 0.18
NCSTN-201ENST00000294785 UBR2Q8IWV8 1755 aa16.18■□□□□ 0.18
NCSTN-201ENST00000294785 CSB-PGBD3P0DP91 1061 aa16.17■□□□□ 0.18
NCSTN-201ENST00000294785 LIG1P18858 919 aa16.17■□□□□ 0.18
NCSTN-201ENST00000294785 TYRO3Q06418 890 aa16.17■□□□□ 0.18
NCSTN-201ENST00000294785 DNAJC2Q99543 621 aaKnown RBP16.17■□□□□ 0.18
NCSTN-201ENST00000294785 HELLSQ9NRZ9 838 aa16.17■□□□□ 0.18
NCSTN-201ENST00000294785 CYP21A2P08686 494 aa16.17■□□□□ 0.18
NCSTN-201ENST00000294785 STK3Q13188 491 aa16.17■□□□□ 0.18
NCSTN-201ENST00000294785 Q6ZUG5 572 aa16.17■□□□□ 0.18
NCSTN-201ENST00000294785 MYRIPQ8NFW9 859 aa16.17■□□□□ 0.18
NCSTN-201ENST00000294785 CLSTN2Q9H4D0 955 aa16.17■□□□□ 0.18
NCSTN-201ENST00000294785 TTC12Q9H892 705 aaPredicted RBP16.17■□□□□ 0.18
NCSTN-201ENST00000294785 MRVI1Q9Y6F6 885 aa16.17■□□□□ 0.18
NCSTN-201ENST00000294785 TJP1Q07157 1748 aa16.17■□□□□ 0.18
NCSTN-201ENST00000294785 TNS3Q68CZ2 1445 aa16.17■□□□□ 0.18
NCSTN-201ENST00000294785 CAVIN2O95810 425 aa16.16■□□□□ 0.18
NCSTN-201ENST00000294785 CABP4P57796 275 aa16.16■□□□□ 0.18
NCSTN-201ENST00000294785 DNTTIP2Q5QJE6 756 aaKnown RBP16.16■□□□□ 0.18
NCSTN-201ENST00000294785 DSCC1Q9BVC3 393 aa16.16■□□□□ 0.18
NCSTN-201ENST00000294785 DACT1Q9NYF0 836 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms