RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ATF7IPQ6VMQ6 1270 aa25.14■■□□□ 1.62
TIMP4-201ENST00000287814 TTLL11Q8NHH1 800 aa25.14■■□□□ 1.62
TIMP4-201ENST00000287814 PLA2G12BQ9BX93 195 aa25.14■■□□□ 1.62
TIMP4-201ENST00000287814 SEC31BQ9NQW1 1179 aa25.14■■□□□ 1.62
TIMP4-201ENST00000287814 C9orf78Q9NZ63 289 aaPredicted RBP25.14■■□□□ 1.62
TIMP4-201ENST00000287814 COL4A1P02462 1669 aa25.14■■□□□ 1.62
TIMP4-201ENST00000287814 IPO8O15397 1037 aaKnown RBP25.13■■□□□ 1.61
TIMP4-201ENST00000287814 CELF1Q92879 486 aaKnown RBP25.13■■□□□ 1.61
TIMP4-201ENST00000287814 NFKBIEO00221 500 aa25.13■■□□□ 1.61
TIMP4-201ENST00000287814 GRAPQ13588 217 aa25.13■■□□□ 1.61
TIMP4-201ENST00000287814 GRAPLQ8TC17 118 aaPredicted RBP25.13■■□□□ 1.61
TIMP4-201ENST00000287814 USP44Q9H0E7 712 aa25.13■■□□□ 1.61
TIMP4-201ENST00000287814 TAF1P21675 1872 aa25.12■■□□□ 1.61
TIMP4-201ENST00000287814 PPEF1O14829 653 aaPredicted RBP25.12■■□□□ 1.61
TIMP4-201ENST00000287814 PRELPP51888 382 aa25.12■■□□□ 1.61
TIMP4-201ENST00000287814 RASSF7Q02833 373 aa25.12■■□□□ 1.61
TIMP4-201ENST00000287814 EPHA10Q5JZY3 1008 aa25.12■■□□□ 1.61
TIMP4-201ENST00000287814 UTYO14607 1347 aa25.12■■□□□ 1.61
TIMP4-201ENST00000287814 CCT4P50991 539 aaKnown RBP25.11■■□□□ 1.61
TIMP4-201ENST00000287814 FOXO4P98177 505 aa25.11■■□□□ 1.61
TIMP4-201ENST00000287814 CCDC152Q4G0S7 254 aa25.11■■□□□ 1.61
TIMP4-201ENST00000287814 CLUAP1Q96AJ1 413 aa25.11■■□□□ 1.61
TIMP4-201ENST00000287814 KAZALD1Q96I82 304 aa25.11■■□□□ 1.61
TIMP4-201ENST00000287814 BBOX1O75936 387 aa25.1■■□□□ 1.61
TIMP4-201ENST00000287814 ZKSCAN2Q63HK3 967 aa25.1■■□□□ 1.61
TIMP4-201ENST00000287814 GREM2Q9H772 168 aa25.1■■□□□ 1.61
TIMP4-201ENST00000287814 RCAN3Q9UKA8 241 aa25.1■■□□□ 1.61
TIMP4-201ENST00000287814 CSF1RP07333 972 aa25.1■■□□□ 1.61
TIMP4-201ENST00000287814 SUCLG2Q96I99 432 aa25.1■■□□□ 1.61
TIMP4-201ENST00000287814 CCDC93Q567U6 631 aa25.09■■□□□ 1.61
TIMP4-201ENST00000287814 INTS3Q68E01 1043 aaKnown RBP25.09■■□□□ 1.61
TIMP4-201ENST00000287814 ATP6V0A2Q9Y487 856 aa25.09■■□□□ 1.61
TIMP4-201ENST00000287814 SNED1Q8TER0 1413 aa25.08■■□□□ 1.61
TIMP4-201ENST00000287814 SOGA3Q5TF21 947 aa25.08■■□□□ 1.61
TIMP4-201ENST00000287814 RPS8P62241 208 aaKnown RBP25.07■■□□□ 1.6
TIMP4-201ENST00000287814 FAM161AQ3B820 660 aa25.06■■□□□ 1.6
TIMP4-201ENST00000287814 SP8Q8IXZ3 490 aa25.06■■□□□ 1.6
TIMP4-201ENST00000287814 FER1L6Q2WGJ9 1857 aa25.05■■□□□ 1.6
TIMP4-201ENST00000287814 CHD4Q14839 1912 aa25.05■■□□□ 1.6
TIMP4-201ENST00000287814 LMBR1LQ6UX01 489 aa25.05■■□□□ 1.6
TIMP4-201ENST00000287814 RTKN2Q8IZC4 609 aa25.05■■□□□ 1.6
TIMP4-201ENST00000287814 RTL9Q8NET4 1388 aa25.05■■□□□ 1.6
TIMP4-201ENST00000287814 RLBP1P12271 317 aa25.04■■□□□ 1.6
TIMP4-201ENST00000287814 YY1P25490 414 aa25.04■■□□□ 1.6
TIMP4-201ENST00000287814 C9orf131Q5VYM1 1079 aa25.04■■□□□ 1.6
TIMP4-201ENST00000287814 CC2D2BQ6DHV5 1058 aa25.04■■□□□ 1.6
TIMP4-201ENST00000287814 TAOK3Q9H2K8 898 aa25.04■■□□□ 1.6
TIMP4-201ENST00000287814 MYH3P11055 1940 aa25.04■■□□□ 1.6
TIMP4-201ENST00000287814 LTBP3Q9NS15 1303 aa25.04■■□□□ 1.6
TIMP4-201ENST00000287814 ITGA6P23229 1130 aa25.04■■□□□ 1.6
TIMP4-201ENST00000287814 TMEM57Q8N5G2 664 aa25.04■■□□□ 1.6
TIMP4-201ENST00000287814 MEIS3Q99687 375 aa25.03■■□□□ 1.6
TIMP4-201ENST00000287814 BICC1Q9H694 974 aaKnown RBP25.03■■□□□ 1.6
TIMP4-201ENST00000287814 PLIN1O60240 522 aa25.02■■□□□ 1.6
TIMP4-201ENST00000287814 FKBP4Q02790 459 aaKnown RBP eCLIP25.02■■□□□ 1.6
TIMP4-201ENST00000287814 RNF181Q9P0P0 153 aa25.02■■□□□ 1.6
TIMP4-201ENST00000287814 LMNB1P20700 586 aa25.01■■□□□ 1.59
TIMP4-201ENST00000287814 TMC4Q7Z404 712 aa25.01■■□□□ 1.59
TIMP4-201ENST00000287814 ANKRD18AQ8IVF6 992 aa25.01■■□□□ 1.59
TIMP4-201ENST00000287814 DZIP1LQ8IYY4 767 aaKnown RBP25.01■■□□□ 1.59
TIMP4-201ENST00000287814 ANKRD44Q8N8A2 993 aa25.01■■□□□ 1.59
TIMP4-201ENST00000287814 ZNF277Q9NRM2 450 aaPredicted RBP25.01■■□□□ 1.59
TIMP4-201ENST00000287814 SBF1O95248 1867 aa25.01■■□□□ 1.59
TIMP4-201ENST00000287814 CDC5LQ99459 802 aaKnown RBP25.01■■□□□ 1.59
TIMP4-201ENST00000287814 CHMP3Q9Y3E7 222 aa25.01■■□□□ 1.59
TIMP4-201ENST00000287814 RABL6Q3YEC7 729 aaPredicted RBP25■■□□□ 1.59
TIMP4-201ENST00000287814 PSMD1Q99460 953 aa25■■□□□ 1.59
TIMP4-201ENST00000287814 UBTFL1P0CB47 393 aaPredicted RBP24.99■■□□□ 1.59
TIMP4-201ENST00000287814 PANK1Q8TE04 598 aa24.99■■□□□ 1.59
TIMP4-201ENST00000287814 TMX4Q9H1E5 349 aaPredicted RBP24.99■■□□□ 1.59
TIMP4-201ENST00000287814 GPSM2P81274 684 aa24.98■■□□□ 1.59
TIMP4-201ENST00000287814 FTSJ3Q8IY81 847 aaKnown RBP24.98■■□□□ 1.59
TIMP4-201ENST00000287814 MPNDQ8N594 471 aa24.98■■□□□ 1.59
TIMP4-201ENST00000287814 ANKRD18BA2A2Z9 1011 aa24.97■■□□□ 1.59
TIMP4-201ENST00000287814 IFIT5Q13325 482 aaKnown RBP24.97■■□□□ 1.59
TIMP4-201ENST00000287814 GRIPAP1Q4V328 841 aa24.97■■□□□ 1.59
TIMP4-201ENST00000287814 BSDC1Q9NW68 430 aaPredicted RBP24.97■■□□□ 1.59
TIMP4-201ENST00000287814 LRRC37AA6NMS7 1700 aa24.97■■□□□ 1.59
TIMP4-201ENST00000287814 DPP8Q6V1X1 898 aaPredicted RBP24.97■■□□□ 1.59
TIMP4-201ENST00000287814 ZNF594Q96JF6 807 aaPredicted RBP24.97■■□□□ 1.59
TIMP4-201ENST00000287814 NSFL1CQ9UNZ2 370 aaKnown RBP24.97■■□□□ 1.59
TIMP4-201ENST00000287814 RTFDC1Q9BY42 306 aaPredicted RBP24.96■■□□□ 1.59
TIMP4-201ENST00000287814 LRRFIP2Q9Y608 721 aaKnown RBP24.96■■□□□ 1.59
TIMP4-201ENST00000287814 CCDC57Q2TAC2 916 aa24.95■■□□□ 1.58
TIMP4-201ENST00000287814 MINPP1Q9UNW1 487 aa24.95■■□□□ 1.58
TIMP4-201ENST00000287814 IGHMBP2P38935 993 aaKnown RBP24.94■■□□□ 1.58
TIMP4-201ENST00000287814 CCDC88AQ3V6T2 1871 aa24.94■■□□□ 1.58
TIMP4-201ENST00000287814 GNAI3P08754 354 aa24.94■■□□□ 1.58
TIMP4-201ENST00000287814 IARSP41252 1262 aaKnown RBP24.94■■□□□ 1.58
TIMP4-201ENST00000287814 ITPRIPQ8IWB1 547 aa24.94■■□□□ 1.58
TIMP4-201ENST00000287814 POLLQ9UGP5 575 aa24.94■■□□□ 1.58
TIMP4-201ENST00000287814 DUOX1Q9NRD9 1551 aa24.93■■□□□ 1.58
TIMP4-201ENST00000287814 WTIPA6NIX2 430 aaPredicted RBP24.93■■□□□ 1.58
TIMP4-201ENST00000287814 C20orf194Q5TEA3 1177 aa24.92■■□□□ 1.58
TIMP4-201ENST00000287814 MPHOSPH8Q99549 860 aa24.92■■□□□ 1.58
TIMP4-201ENST00000287814 PODXL2Q9NZ53 605 aa24.92■■□□□ 1.58
TIMP4-201ENST00000287814 COL4A5P29400 1685 aa24.91■■□□□ 1.58
TIMP4-201ENST00000287814 ZBTB7BO15156 539 aaPredicted RBP24.91■■□□□ 1.58
TIMP4-201ENST00000287814 AOC3Q16853 763 aa24.91■■□□□ 1.58
TIMP4-201ENST00000287814 TBC1D16Q8TBP0 767 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms