RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 CAVIN2O95810 425 aa16.56■□□□□ 0.24
VPS26B-201ENST00000281187 APPP05067 770 aa16.56■□□□□ 0.24
VPS26B-201ENST00000281187 TOP1P11387 765 aaKnown RBP16.56■□□□□ 0.24
VPS26B-201ENST00000281187 APOBRQ0VD83 1088 aa16.56■□□□□ 0.24
VPS26B-201ENST00000281187 PI4K2BQ8TCG2 481 aa16.56■□□□□ 0.24
VPS26B-201ENST00000281187 UTP14AQ9BVJ6 771 aaKnown RBP16.56■□□□□ 0.24
VPS26B-201ENST00000281187 PDIA4P13667 645 aaKnown RBP16.56■□□□□ 0.24
VPS26B-201ENST00000281187 RPS6KB1P23443 525 aa16.56■□□□□ 0.24
VPS26B-201ENST00000281187 KRBA2Q6ZNG9 492 aa16.56■□□□□ 0.24
VPS26B-201ENST00000281187 TDRD7Q8NHU6 1098 aaKnown RBP16.56■□□□□ 0.24
VPS26B-201ENST00000281187 CCDC102AQ96A19 550 aa16.56■□□□□ 0.24
VPS26B-201ENST00000281187 KIAA0232Q92628 1395 aa16.56■□□□□ 0.24
VPS26B-201ENST00000281187 A0A0D9SFI3 127 aa16.55■□□□□ 0.24
VPS26B-201ENST00000281187 CTIFO43310 598 aaKnown RBP16.55■□□□□ 0.24
VPS26B-201ENST00000281187 CPLX3Q8WVH0 158 aa16.55■□□□□ 0.24
VPS26B-201ENST00000281187 ZSCAN16Q9H4T2 348 aaPredicted RBP16.55■□□□□ 0.24
VPS26B-201ENST00000281187 POGZQ7Z3K3 1410 aa16.55■□□□□ 0.24
VPS26B-201ENST00000281187 MARCKSP29966 332 aaPredicted RBP16.55■□□□□ 0.24
VPS26B-201ENST00000281187 HAND2P61296 217 aa16.55■□□□□ 0.24
VPS26B-201ENST00000281187 CCDC191Q8NCU4 936 aa16.55■□□□□ 0.24
VPS26B-201ENST00000281187 TET3O43151 1660 aa16.54■□□□□ 0.24
VPS26B-201ENST00000281187 ZFYVE16Q7Z3T8 1539 aa16.54■□□□□ 0.24
VPS26B-201ENST00000281187 SEC31AO94979 1220 aaKnown RBP16.54■□□□□ 0.24
VPS26B-201ENST00000281187 RALYLQ86SE5 291 aaKnown RBP16.54■□□□□ 0.24
VPS26B-201ENST00000281187 XPO4Q9C0E2 1151 aaKnown RBP16.54■□□□□ 0.24
VPS26B-201ENST00000281187 CCP110O43303 1012 aa16.54■□□□□ 0.24
VPS26B-201ENST00000281187 PHACTR2O75167 634 aa16.54■□□□□ 0.24
VPS26B-201ENST00000281187 TTC41PQ6P2S7 1318 aa16.54■□□□□ 0.24
VPS26B-201ENST00000281187 UBASH3AP57075 661 aa16.54■□□□□ 0.24
VPS26B-201ENST00000281187 PTPDC1A2A3K4 754 aa16.53■□□□□ 0.24
VPS26B-201ENST00000281187 CASQ1P31415 396 aa16.53■□□□□ 0.24
VPS26B-201ENST00000281187 EVCP57679 992 aa16.53■□□□□ 0.24
VPS26B-201ENST00000281187 MRPS27Q92552 414 aaKnown RBP16.53■□□□□ 0.24
VPS26B-201ENST00000281187 GTF2E1P29083 439 aaPredicted RBP16.53■□□□□ 0.24
VPS26B-201ENST00000281187 PGBD1Q96JS3 809 aa16.53■□□□□ 0.24
VPS26B-201ENST00000281187 C8orf76Q96K31 380 aa16.53■□□□□ 0.24
VPS26B-201ENST00000281187 RNF216Q9NWF9 866 aaPredicted RBP16.53■□□□□ 0.24
VPS26B-201ENST00000281187 CCDC150Q8NCX0 1101 aa16.52■□□□□ 0.24
VPS26B-201ENST00000281187 USP28Q96RU2 1077 aa16.52■□□□□ 0.24
VPS26B-201ENST00000281187 FUCA2Q9BTY2 467 aa16.52■□□□□ 0.24
VPS26B-201ENST00000281187 GOLGA8FQ08AF8 430 aa16.52■□□□□ 0.24
VPS26B-201ENST00000281187 GOLGA8DPQ0D2H9 430 aa16.52■□□□□ 0.24
VPS26B-201ENST00000281187 AOX1Q06278 1338 aa16.52■□□□□ 0.23
VPS26B-201ENST00000281187 SLFN14P0C7P3 912 aa16.52■□□□□ 0.23
VPS26B-201ENST00000281187 IRX5P78411 483 aaPredicted RBP16.52■□□□□ 0.23
VPS26B-201ENST00000281187 KARSQ15046 597 aaKnown RBP16.52■□□□□ 0.23
VPS26B-201ENST00000281187 ARFGAP3Q9NP61 516 aa16.52■□□□□ 0.23
VPS26B-201ENST00000281187 ERCC6L2Q5T890 1561 aa16.52■□□□□ 0.23
VPS26B-201ENST00000281187 HNRNPH2P55795 449 aaKnown RBP16.51■□□□□ 0.23
VPS26B-201ENST00000281187 FKBP4Q02790 459 aaKnown RBP eCLIP16.51■□□□□ 0.23
VPS26B-201ENST00000281187 TRIM29Q14134 588 aa16.51■□□□□ 0.23
VPS26B-201ENST00000281187 NFXL1Q6ZNB6 911 aa16.51■□□□□ 0.23
VPS26B-201ENST00000281187 EPC1Q9H2F5 836 aa16.51■□□□□ 0.23
VPS26B-201ENST00000281187 PIP4K2AP48426 406 aaPredicted RBP16.51■□□□□ 0.23
VPS26B-201ENST00000281187 FAM160A1Q05DH4 1040 aa16.51■□□□□ 0.23
VPS26B-201ENST00000281187 TAF7LQ5H9L4 462 aa16.51■□□□□ 0.23
VPS26B-201ENST00000281187 CCDC12Q8WUD4 166 aaPredicted RBP16.51■□□□□ 0.23
VPS26B-201ENST00000281187 TM6SF1Q9BZW5 370 aa16.51■□□□□ 0.23
VPS26B-201ENST00000281187 ZCCHC17Q9NP64 241 aaKnown RBP16.51■□□□□ 0.23
VPS26B-201ENST00000281187 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.51■□□□□ 0.23
VPS26B-201ENST00000281187 EDC4Q6P2E9 1401 aaKnown RBP16.51■□□□□ 0.23
VPS26B-201ENST00000281187 NOM1Q5C9Z4 860 aaKnown RBP16.5■□□□□ 0.23
VPS26B-201ENST00000281187 PLA2G4DQ86XP0 818 aa16.5■□□□□ 0.23
VPS26B-201ENST00000281187 SEC62Q99442 399 aaKnown RBP16.5■□□□□ 0.23
VPS26B-201ENST00000281187 MORC2Q9Y6X9 1032 aaPredicted RBP16.5■□□□□ 0.23
VPS26B-201ENST00000281187 ARHGEF40Q8TER5 1519 aa16.5■□□□□ 0.23
VPS26B-201ENST00000281187 SHROOM2Q13796 1616 aa16.5■□□□□ 0.23
VPS26B-201ENST00000281187 GOLIM4O00461 696 aa16.5■□□□□ 0.23
VPS26B-201ENST00000281187 CLCN6P51797 869 aa16.5■□□□□ 0.23
VPS26B-201ENST00000281187 ZSCAN12O43309 604 aa16.5■□□□□ 0.23
VPS26B-201ENST00000281187 GYS2P54840 703 aa16.5■□□□□ 0.23
VPS26B-201ENST00000281187 FAM193AP78312 1265 aa16.5■□□□□ 0.23
VPS26B-201ENST00000281187 KLHL10Q6JEL2 608 aa16.5■□□□□ 0.23
VPS26B-201ENST00000281187 EAF2Q96CJ1 260 aaPredicted RBP16.5■□□□□ 0.23
VPS26B-201ENST00000281187 TLR7Q9NYK1 1049 aaKnown RBP16.5■□□□□ 0.23
VPS26B-201ENST00000281187 A0A0G2JS52 829 aa16.49■□□□□ 0.23
VPS26B-201ENST00000281187 MRFAP1L1Q96HT8 127 aa16.49■□□□□ 0.23
VPS26B-201ENST00000281187 DBF4Q9UBU7 674 aaPredicted RBP16.49■□□□□ 0.23
VPS26B-201ENST00000281187 OAS2P29728 719 aaKnown RBP16.49■□□□□ 0.23
VPS26B-201ENST00000281187 TRDNQ13061 729 aa16.49■□□□□ 0.23
VPS26B-201ENST00000281187 CPLX2Q6PUV4 134 aaKnown RBP16.49■□□□□ 0.23
VPS26B-201ENST00000281187 IL17REQ8NFR9 667 aa16.49■□□□□ 0.23
VPS26B-201ENST00000281187 HMG20BQ9P0W2 317 aa16.49■□□□□ 0.23
VPS26B-201ENST00000281187 PUF60Q9UHX1 559 aaKnown RBP16.49■□□□□ 0.23
VPS26B-201ENST00000281187 KCNQ3O43525 872 aa16.49■□□□□ 0.23
VPS26B-201ENST00000281187 ZNF589Q86UQ0 364 aaPredicted RBP16.49■□□□□ 0.23
VPS26B-201ENST00000281187 TXLNBQ8N3L3 684 aa16.49■□□□□ 0.23
VPS26B-201ENST00000281187 CBFA2T2O43439 604 aa16.48■□□□□ 0.23
VPS26B-201ENST00000281187 CCDC85AQ96PX6 553 aaPredicted RBP16.48■□□□□ 0.23
VPS26B-201ENST00000281187 TAF6LQ9Y6J9 622 aa16.48■□□□□ 0.23
VPS26B-201ENST00000281187 GLI2P10070 1586 aa16.48■□□□□ 0.23
VPS26B-201ENST00000281187 MYD88Q99836 296 aa16.48■□□□□ 0.23
VPS26B-201ENST00000281187 BICC1Q9H694 974 aaKnown RBP16.48■□□□□ 0.23
VPS26B-201ENST00000281187 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
VPS26B-201ENST00000281187 ELP1O95163 1332 aa16.48■□□□□ 0.23
VPS26B-201ENST00000281187 KIF4BQ2VIQ3 1234 aa16.48■□□□□ 0.23
VPS26B-201ENST00000281187 CCDC82Q8N4S0 544 aa16.48■□□□□ 0.23
VPS26B-201ENST00000281187 LGR6Q9HBX8 967 aa16.48■□□□□ 0.23
VPS26B-201ENST00000281187 ORC3Q9UBD5 711 aaPredicted RBP16.48■□□□□ 0.23
VPS26B-201ENST00000281187 ADGRB2O60241 1585 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms