RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 TNNI3KQ59H18 835 aa12.4□□□□□ -0.42
SEC24D-201ENST00000280551 DHX37Q8IY37 1157 aaKnown RBP12.4□□□□□ -0.42
SEC24D-201ENST00000280551 FPGT-TNNI3KV9GXZ4 949 aa12.4□□□□□ -0.42
SEC24D-201ENST00000280551 VGLL2Q8N8G2 317 aa12.4□□□□□ -0.42
SEC24D-201ENST00000280551 IL1RAPL2Q9NP60 686 aa12.4□□□□□ -0.42
SEC24D-201ENST00000280551 UBN2Q6ZU65 1347 aa12.4□□□□□ -0.42
SEC24D-201ENST00000280551 CHD4Q14839 1912 aa12.4□□□□□ -0.42
SEC24D-201ENST00000280551 CAMTA2O94983 1202 aa12.4□□□□□ -0.42
SEC24D-201ENST00000280551 CD2BP2O95400 341 aaKnown RBP12.4□□□□□ -0.42
SEC24D-201ENST00000280551 PIP4K2AP48426 406 aaPredicted RBP12.4□□□□□ -0.42
SEC24D-201ENST00000280551 ITPK1Q13572 414 aa12.4□□□□□ -0.43
SEC24D-201ENST00000280551 NUTM1Q86Y26 1132 aa12.4□□□□□ -0.43
SEC24D-201ENST00000280551 CNTROBQ8N137 903 aa12.4□□□□□ -0.43
SEC24D-201ENST00000280551 ZBTB1Q9Y2K1 713 aa12.4□□□□□ -0.43
SEC24D-201ENST00000280551 TSGA10IPQ3SY00 556 aa12.39□□□□□ -0.43
SEC24D-201ENST00000280551 RPAP1Q9BWH6 1393 aaPredicted RBP12.39□□□□□ -0.43
SEC24D-201ENST00000280551 PTCD1O75127 700 aaKnown RBP12.39□□□□□ -0.43
SEC24D-201ENST00000280551 IL15P40933 162 aaPredicted RBP12.39□□□□□ -0.43
SEC24D-201ENST00000280551 ZMYND15Q9H091 742 aa12.39□□□□□ -0.43
SEC24D-201ENST00000280551 ALDH8A1Q9H2A2 487 aaPredicted RBP12.39□□□□□ -0.43
SEC24D-201ENST00000280551 DBNLQ9UJU6 430 aaKnown RBP12.39□□□□□ -0.43
SEC24D-201ENST00000280551 CCDC87Q9NVE4 849 aa12.39□□□□□ -0.43
SEC24D-201ENST00000280551 LOC102724428A0A0B4J2F2 783 aa12.38□□□□□ -0.43
SEC24D-201ENST00000280551 SIK1P57059 783 aa12.38□□□□□ -0.43
SEC24D-201ENST00000280551 G3BP1Q13283 466 aaKnown RBP eCLIP12.38□□□□□ -0.431e-6■■■□□ 15.2
SEC24D-201ENST00000280551 HLFQ16534 295 aa12.38□□□□□ -0.43
SEC24D-201ENST00000280551 USPL1Q5W0Q7 1092 aa12.38□□□□□ -0.43
SEC24D-201ENST00000280551 KIF6Q6ZMV9 814 aa12.38□□□□□ -0.43
SEC24D-201ENST00000280551 HAUS7Q99871 368 aa12.38□□□□□ -0.43
SEC24D-201ENST00000280551 UBAP1LF5GYI3 381 aa12.38□□□□□ -0.43
SEC24D-201ENST00000280551 ATP5J2-PTCD1G3V325 749 aa12.38□□□□□ -0.43
SEC24D-201ENST00000280551 HIP1O00291 1037 aa12.38□□□□□ -0.43
SEC24D-201ENST00000280551 CYP2E1P05181 493 aaPredicted RBP12.38□□□□□ -0.43
SEC24D-201ENST00000280551 CLEC4GQ6UXB4 293 aa12.38□□□□□ -0.43
SEC24D-201ENST00000280551 GPATCH3Q96I76 525 aa12.38□□□□□ -0.43
SEC24D-201ENST00000280551 ZNF646O15015 1829 aaPredicted RBP12.38□□□□□ -0.43
SEC24D-201ENST00000280551 DLEC1Q9Y238 1755 aa12.37□□□□□ -0.43
SEC24D-201ENST00000280551 K7ELQ4 463 aaPredicted RBP12.37□□□□□ -0.43
SEC24D-201ENST00000280551 EYA2O00167 538 aa12.37□□□□□ -0.43
SEC24D-201ENST00000280551 TLR7Q9NYK1 1049 aaKnown RBP12.37□□□□□ -0.43
SEC24D-201ENST00000280551 CUL4AQ13619 759 aa12.37□□□□□ -0.43
SEC24D-201ENST00000280551 TSHZ3Q63HK5 1081 aa12.37□□□□□ -0.43
SEC24D-201ENST00000280551 LMBR1LQ6UX01 489 aa12.37□□□□□ -0.43
SEC24D-201ENST00000280551 RIPOR2Q9Y4F9 1068 aa12.37□□□□□ -0.43
SEC24D-201ENST00000280551 SH3TC1Q8TE82 1336 aa12.37□□□□□ -0.43
SEC24D-201ENST00000280551 ADAMTS2O95450 1211 aa12.36□□□□□ -0.43
SEC24D-201ENST00000280551 CRKLP46109 303 aaKnown RBP12.36□□□□□ -0.43
SEC24D-201ENST00000280551 TTC14Q96N46 770 aa12.36□□□□□ -0.43
SEC24D-201ENST00000280551 TM6SF1Q9BZW5 370 aa12.36□□□□□ -0.43
SEC24D-201ENST00000280551 DUOX1Q9NRD9 1551 aa12.36□□□□□ -0.43
SEC24D-201ENST00000280551 AACSQ86V21 672 aa12.36□□□□□ -0.43
SEC24D-201ENST00000280551 TTLL11Q8NHH1 800 aa12.36□□□□□ -0.43
SEC24D-201ENST00000280551 TFCP2Q12800 502 aa12.35□□□□□ -0.43
SEC24D-201ENST00000280551 NECTIN1Q15223 517 aa12.35□□□□□ -0.43
SEC24D-201ENST00000280551 ZBTB3Q9H5J0 574 aa12.35□□□□□ -0.43
SEC24D-201ENST00000280551 CACNA1SQ13698 1873 aa12.35□□□□□ -0.43
SEC24D-201ENST00000280551 NTSR2O95665 410 aa12.35□□□□□ -0.43
SEC24D-201ENST00000280551 PARP10Q53GL7 1025 aa12.35□□□□□ -0.43
SEC24D-201ENST00000280551 TAF1P21675 1872 aa12.35□□□□□ -0.43
SEC24D-201ENST00000280551 ANKRD31Q8N7Z5 1873 aa12.34□□□□□ -0.43
SEC24D-201ENST00000280551 MCM2P49736 904 aa12.34□□□□□ -0.43
SEC24D-201ENST00000280551 MAP4K1Q92918 833 aa12.34□□□□□ -0.43
SEC24D-201ENST00000280551 LAMB1P07942 1786 aa12.34□□□□□ -0.43
SEC24D-201ENST00000280551 CTSWP56202 376 aa12.34□□□□□ -0.43
SEC24D-201ENST00000280551 IFIT2P09913 472 aaKnown RBP12.34□□□□□ -0.43
SEC24D-201ENST00000280551 FGFR2P21802 821 aa12.34□□□□□ -0.43
SEC24D-201ENST00000280551 SLC10A5Q5PT55 438 aa12.34□□□□□ -0.43
SEC24D-201ENST00000280551 KLHDC4Q8TBB5 520 aa12.34□□□□□ -0.43
SEC24D-201ENST00000280551 APBB1O00213 710 aa12.34□□□□□ -0.43
SEC24D-201ENST00000280551 HSCBQ8IWL3 235 aa12.34□□□□□ -0.43
SEC24D-201ENST00000280551 LINC00116Q8NCU8 138 aa12.34□□□□□ -0.43
SEC24D-201ENST00000280551 RAB3GAP1Q15042 981 aa12.33□□□□□ -0.44
SEC24D-201ENST00000280551 PDE8AO60658 829 aa12.33□□□□□ -0.44
SEC24D-201ENST00000280551 GJD4Q96KN9 370 aaPredicted RBP12.33□□□□□ -0.44
SEC24D-201ENST00000280551 CHMP5Q9NZZ3 219 aa12.33□□□□□ -0.44
SEC24D-201ENST00000280551 PALD1Q9ULE6 856 aa12.33□□□□□ -0.44
SEC24D-201ENST00000280551 FOCADQ5VW36 1801 aa12.33□□□□□ -0.44
SEC24D-201ENST00000280551 MAPK8IP2Q13387 824 aaPredicted RBP12.33□□□□□ -0.44
SEC24D-201ENST00000280551 DZIP3Q86Y13 1208 aaKnown RBP12.33□□□□□ -0.44
SEC24D-201ENST00000280551 INTS4Q96HW7 963 aaKnown RBP12.33□□□□□ -0.44
SEC24D-201ENST00000280551 ECM29Q5VYK3 1845 aa12.32□□□□□ -0.44
SEC24D-201ENST00000280551 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
SEC24D-201ENST00000280551 DDX60LQ5H9U9 1706 aaKnown RBP12.32□□□□□ -0.44
SEC24D-201ENST00000280551 CCDC88AQ3V6T2 1871 aa12.32□□□□□ -0.44
SEC24D-201ENST00000280551 RRAGDQ9NQL2 400 aaPredicted RBP12.32□□□□□ -0.44
SEC24D-201ENST00000280551 CCDC171Q6TFL3 1326 aa12.31□□□□□ -0.44
SEC24D-201ENST00000280551 RUFY2Q8WXA3 655 aa12.31□□□□□ -0.44
SEC24D-201ENST00000280551 USP21Q9UK80 565 aa12.31□□□□□ -0.44
SEC24D-201ENST00000280551 PIP4K2BP78356 416 aa12.31□□□□□ -0.44
SEC24D-201ENST00000280551 SNX14Q9Y5W7 946 aa12.31□□□□□ -0.44
SEC24D-201ENST00000280551 KCNQ2O43526 872 aa12.31□□□□□ -0.44
SEC24D-201ENST00000280551 LRRC24Q50LG9 513 aa12.31□□□□□ -0.44
SEC24D-201ENST00000280551 FBXL16Q8N461 479 aa12.31□□□□□ -0.44
SEC24D-201ENST00000280551 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
SEC24D-201ENST00000280551 CDK5RAP2Q96SN8 1893 aa12.31□□□□□ -0.44
SEC24D-201ENST00000280551 ATP6V1AP38606 617 aa12.3□□□□□ -0.44
SEC24D-201ENST00000280551 ARID4AP29374 1257 aaPredicted RBP12.3□□□□□ -0.44
SEC24D-201ENST00000280551 FAM98CQ17RN3 349 aaKnown RBP12.3□□□□□ -0.44
SEC24D-201ENST00000280551 KBTBD3Q8NAB2 608 aa12.3□□□□□ -0.44
SEC24D-201ENST00000280551 CWC22Q9HCG8 908 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms