RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 GBP4Q96PP9 640 aa21.65■■□□□ 1.06
CAPN1-201ENST00000279247 VSIG10Q8N0Z9 540 aa21.64■■□□□ 1.06
CAPN1-201ENST00000279247 MAP3K15Q6ZN16 1313 aa21.64■■□□□ 1.06
CAPN1-201ENST00000279247 ANAPC15P60006 121 aa21.64■■□□□ 1.05
CAPN1-201ENST00000279247 ADCK5Q3MIX3 580 aa21.64■■□□□ 1.05
CAPN1-201ENST00000279247 CCDC129Q6ZRS4 1044 aa21.64■■□□□ 1.05
CAPN1-201ENST00000279247 ZNF589Q86UQ0 364 aaPredicted RBP21.64■■□□□ 1.05
CAPN1-201ENST00000279247 DZIP3Q86Y13 1208 aaKnown RBP21.64■■□□□ 1.05
CAPN1-201ENST00000279247 FNBP4Q8N3X1 1017 aaPredicted RBP21.64■■□□□ 1.05
CAPN1-201ENST00000279247 SEC62Q99442 399 aaKnown RBP21.64■■□□□ 1.05
CAPN1-201ENST00000279247 SMIM5Q71RC9 77 aa21.64■■□□□ 1.05
CAPN1-201ENST00000279247 JAKMIP1Q96N16 626 aaKnown RBP21.64■■□□□ 1.05
CAPN1-201ENST00000279247 GIGYF2Q6Y7W6 1299 aaKnown RBP21.63■■□□□ 1.05
CAPN1-201ENST00000279247 TCEANC2Q96MN5 208 aa21.63■■□□□ 1.05
CAPN1-201ENST00000279247 TRMT112Q9UI30 125 aaKnown RBP21.63■■□□□ 1.05
CAPN1-201ENST00000279247 THRAP3Q9Y2W1 955 aaKnown RBP21.63■■□□□ 1.05
CAPN1-201ENST00000279247 NRAPQ86VF7 1730 aa21.63■■□□□ 1.05
CAPN1-201ENST00000279247 EYA2O00167 538 aa21.63■■□□□ 1.05
CAPN1-201ENST00000279247 GOLIM4O00461 696 aa21.63■■□□□ 1.05
CAPN1-201ENST00000279247 VPS72Q15906 364 aa21.63■■□□□ 1.05
CAPN1-201ENST00000279247 SNRKQ9NRH2 765 aa21.63■■□□□ 1.05
CAPN1-201ENST00000279247 RBM8AQ9Y5S9 174 aaKnown RBP21.62■■□□□ 1.05
CAPN1-201ENST00000279247 GORABQ5T7V8 394 aa21.61■■□□□ 1.05
CAPN1-201ENST00000279247 CCDC171Q6TFL3 1326 aa21.61■■□□□ 1.05
CAPN1-201ENST00000279247 A0A1B0GUL7 405 aa21.61■■□□□ 1.05
CAPN1-201ENST00000279247 COL9A3Q14050 684 aaPredicted RBP21.61■■□□□ 1.05
CAPN1-201ENST00000279247 MCTP1Q6DN14 999 aa21.61■■□□□ 1.05
CAPN1-201ENST00000279247 PAPPAQ13219 1627 aa21.61■■□□□ 1.05
CAPN1-201ENST00000279247 ATP5JP18859 108 aa21.61■■□□□ 1.05
CAPN1-201ENST00000279247 CEP126Q9P2H0 1117 aa21.61■■□□□ 1.05
CAPN1-201ENST00000279247 SPATA31A6Q5VVP1 1343 aa21.6■■□□□ 1.05
CAPN1-201ENST00000279247 DDX11L8A8MPP1 907 aa21.6■■□□□ 1.05
CAPN1-201ENST00000279247 IL15P40933 162 aaPredicted RBP21.6■■□□□ 1.05
CAPN1-201ENST00000279247 NLRP10Q86W26 655 aa21.6■■□□□ 1.05
CAPN1-201ENST00000279247 FKBP4Q02790 459 aaKnown RBP eCLIP21.6■■□□□ 1.05
CAPN1-201ENST00000279247 IFIT5Q13325 482 aaKnown RBP21.6■■□□□ 1.05
CAPN1-201ENST00000279247 ZBTB38Q8NAP3 1195 aaPredicted RBP21.6■■□□□ 1.05
CAPN1-201ENST00000279247 TAF6LQ9Y6J9 622 aa21.6■■□□□ 1.05
CAPN1-201ENST00000279247 AK2P54819 239 aa21.59■■□□□ 1.05
CAPN1-201ENST00000279247 BARGINQ6ZT62 677 aa21.59■■□□□ 1.05
CAPN1-201ENST00000279247 GREM2Q9H772 168 aa21.59■■□□□ 1.05
CAPN1-201ENST00000279247 TPRNQ4KMQ1 711 aa21.59■■□□□ 1.05
CAPN1-201ENST00000279247 ADORA1P30542 326 aa21.58■■□□□ 1.05
CAPN1-201ENST00000279247 NUP188Q5SRE5 1749 aa21.58■■□□□ 1.05
CAPN1-201ENST00000279247 LOC102724428A0A0B4J2F2 783 aa21.58■■□□□ 1.05
CAPN1-201ENST00000279247 PCCAP05165 728 aaPredicted RBP21.58■■□□□ 1.05
CAPN1-201ENST00000279247 SIK1P57059 783 aa21.58■■□□□ 1.05
CAPN1-201ENST00000279247 IRS4O14654 1257 aaPredicted RBP21.58■■□□□ 1.04
CAPN1-201ENST00000279247 BAG4O95429 457 aaKnown RBP21.58■■□□□ 1.04
CAPN1-201ENST00000279247 NCLP19338 710 aaKnown RBP21.58■■□□□ 1.04
CAPN1-201ENST00000279247 CRKLP46109 303 aaKnown RBP21.58■■□□□ 1.04
CAPN1-201ENST00000279247 CDCA7Q9BWT1 371 aaPredicted RBP21.58■■□□□ 1.04
CAPN1-201ENST00000279247 HIP1O00291 1037 aa21.57■■□□□ 1.04
CAPN1-201ENST00000279247 HCLS1P14317 486 aaPredicted RBP21.57■■□□□ 1.04
CAPN1-201ENST00000279247 NUCB2P80303 420 aa21.57■■□□□ 1.04
CAPN1-201ENST00000279247 CREB3L3Q68CJ9 461 aa21.57■■□□□ 1.04
CAPN1-201ENST00000279247 GOLGB1Q14789 3259 aaKnown RBP21.57■■□□□ 1.04
CAPN1-201ENST00000279247 ZKSCAN1P17029 563 aaPredicted RBP21.57■■□□□ 1.04
CAPN1-201ENST00000279247 ITGA6P23229 1130 aa21.57■■□□□ 1.04
CAPN1-201ENST00000279247 IFIT1P09914 478 aaKnown RBP21.56■■□□□ 1.04
CAPN1-201ENST00000279247 ITPK1Q13572 414 aa21.56■■□□□ 1.04
CAPN1-201ENST00000279247 LDHAL6AQ6ZMR3 332 aa21.56■■□□□ 1.04
CAPN1-201ENST00000279247 GJD4Q96KN9 370 aaPredicted RBP21.56■■□□□ 1.04
CAPN1-201ENST00000279247 MCM2P49736 904 aa21.56■■□□□ 1.04
CAPN1-201ENST00000279247 CNNM1Q9NRU3 951 aa21.56■■□□□ 1.04
CAPN1-201ENST00000279247 TJP1Q07157 1748 aa21.56■■□□□ 1.04
CAPN1-201ENST00000279247 CWC22Q9HCG8 908 aaKnown RBP21.55■■□□□ 1.04
CAPN1-201ENST00000279247 HELBQ8NG08 1087 aaPredicted RBP21.55■■□□□ 1.04
CAPN1-201ENST00000279247 HAUS7Q99871 368 aa21.55■■□□□ 1.04
CAPN1-201ENST00000279247 QTRT2Q9H974 415 aaKnown RBP21.55■■□□□ 1.04
CAPN1-201ENST00000279247 ZDHHC9Q9Y397 364 aa21.55■■□□□ 1.04
CAPN1-201ENST00000279247 COL15A1P39059 1388 aa21.55■■□□□ 1.04
CAPN1-201ENST00000279247 HSP90AB3PQ58FF7 597 aa21.55■■□□□ 1.04
CAPN1-201ENST00000279247 METTL24Q5JXM2 366 aa21.55■■□□□ 1.04
CAPN1-201ENST00000279247 PI16Q6UXB8 463 aa21.55■■□□□ 1.04
CAPN1-201ENST00000279247 PAG1Q9NWQ8 432 aa21.55■■□□□ 1.04
CAPN1-201ENST00000279247 UBN2Q6ZU65 1347 aa21.54■■□□□ 1.04
CAPN1-201ENST00000279247 GOLGA6L22H0YM25 854 aa21.54■■□□□ 1.04
CAPN1-201ENST00000279247 LARGE1O95461 756 aa21.54■■□□□ 1.04
CAPN1-201ENST00000279247 RUFY3Q7L099 469 aa21.54■■□□□ 1.04
CAPN1-201ENST00000279247 PDRG1Q9NUG6 133 aa21.54■■□□□ 1.04
CAPN1-201ENST00000279247 DOT1LQ8TEK3 1739 aa21.54■■□□□ 1.04
CAPN1-201ENST00000279247 NECTIN1Q15223 517 aa21.54■■□□□ 1.04
CAPN1-201ENST00000279247 CCDC87Q9NVE4 849 aa21.54■■□□□ 1.04
CAPN1-201ENST00000279247 SLC27A2O14975 620 aa21.53■■□□□ 1.04
CAPN1-201ENST00000279247 TRIM28Q13263 835 aaKnown RBP21.53■■□□□ 1.04
CAPN1-201ENST00000279247 TTLL11Q8NHH1 800 aa21.53■■□□□ 1.04
CAPN1-201ENST00000279247 MAP4K1Q92918 833 aa21.53■■□□□ 1.04
CAPN1-201ENST00000279247 BRPF3Q9ULD4 1205 aa21.53■■□□□ 1.04
CAPN1-201ENST00000279247 CYP46A1Q9Y6A2 500 aa21.53■■□□□ 1.04
CAPN1-201ENST00000279247 IL6STP40189 918 aaPredicted RBP21.53■■□□□ 1.04
CAPN1-201ENST00000279247 TTC39AQ5SRH9 613 aa21.53■■□□□ 1.04
CAPN1-201ENST00000279247 INTS5Q6P9B9 1019 aaKnown RBP21.53■■□□□ 1.04
CAPN1-201ENST00000279247 XAGE2Q96GT9 111 aa21.53■■□□□ 1.04
CAPN1-201ENST00000279247 CCDC83Q8IWF9 413 aa21.52■■□□□ 1.04
CAPN1-201ENST00000279247 SNAP23O00161 211 aa21.52■■□□□ 1.04
CAPN1-201ENST00000279247 NECAB1Q8N987 351 aa21.52■■□□□ 1.04
CAPN1-201ENST00000279247 DDX49Q9Y6V7 483 aaKnown RBP21.52■■□□□ 1.04
CAPN1-201ENST00000279247 CTSWP56202 376 aa21.51■■□□□ 1.03
CAPN1-201ENST00000279247 BICDL1Q6ZP65 573 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms