RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 ERO1AQ96HE7 468 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 GOLGA8QA0A0J9YX86 632 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 GOLGA8OA6NCC3 632 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 GOLGA8NF8WBI6 632 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 CLNS1AP54105 237 aaKnown RBP6.2□□□□□ -1.42
XRN1-201ENST00000264951 NOLC1Q14978 699 aaKnown RBP eCLIP6.2□□□□□ -1.42
XRN1-201ENST00000264951 LGSNQ5TDP6 509 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 ARMC9Q7Z3E5 817 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 SMARCC2Q8TAQ2 1214 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 NCAPD3P42695 1498 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 PSMC4P43686 418 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 N4BP3O15049 544 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 UBA7P41226 1012 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 TMC6Q7Z403 805 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 PLCB1Q9NQ66 1216 aa6.2□□□□□ -1.42
XRN1-201ENST00000264951 CETN3O15182 167 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 HDGFL1Q5TGJ6 251 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 SKILP12757 684 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 APBB1IPQ7Z5R6 666 aaPredicted RBP6.19□□□□□ -1.42
XRN1-201ENST00000264951 DRC3Q9H069 523 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 TTF1Q15361 905 aaPredicted RBP6.19□□□□□ -1.42
XRN1-201ENST00000264951 SLC4A8Q2Y0W8 1093 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 IMPG2Q9BZV3 1241 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 POLE3Q9NRF9 147 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 SMARCA4P51532 1647 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 INF2Q27J81 1249 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 BMP2KLQ5H9B9 411 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 DUSP27Q5VZP5 1158 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 CNPY4Q8N129 248 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 MCUR1Q96AQ8 359 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 SCLT1Q96NL6 688 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 SPATS2LQ9NUQ6 558 aaKnown RBP6.19□□□□□ -1.42
XRN1-201ENST00000264951 TACC3Q9Y6A5 838 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 B4DLN1 442 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 GNAQP50148 359 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 MRPL12P52815 198 aaKnown RBP6.19□□□□□ -1.42
XRN1-201ENST00000264951 XPCQ01831 940 aaPredicted RBP6.19□□□□□ -1.42
XRN1-201ENST00000264951 CCDC96Q2M329 555 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 NPHP3Q7Z494 1330 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 MX1P20591 662 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 PODNQ7Z5L7 613 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 CATIPQ7Z7H3 387 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 RAB11FIP4Q86YS3 637 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 GBP5Q96PP8 586 aa6.19□□□□□ -1.42
XRN1-201ENST00000264951 TBCAO75347 108 aaKnown RBP6.18□□□□□ -1.42
XRN1-201ENST00000264951 MLECQ14165 292 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 PAXIP1Q6ZW49 1069 aaPredicted RBP6.18□□□□□ -1.42
XRN1-201ENST00000264951 AFAP1L1Q8TED9 768 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 RNF10Q8N5U6 811 aaKnown RBP6.18□□□□□ -1.42
XRN1-201ENST00000264951 FSIP1Q8NA03 581 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 UTP14AQ9BVJ6 771 aaKnown RBP6.18□□□□□ -1.42
XRN1-201ENST00000264951 PRPF4BQ13523 1007 aaKnown RBP6.18□□□□□ -1.42
XRN1-201ENST00000264951 PDCD2Q16342 344 aaPredicted RBP6.18□□□□□ -1.42
XRN1-201ENST00000264951 VPS52Q8N1B4 723 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 ZHX1Q9UKY1 873 aaPredicted RBP6.18□□□□□ -1.42
XRN1-201ENST00000264951 FCHSD2O94868 740 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 KRT13P13646 458 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 MAP3K7CLP57077 242 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 PRR16Q569H4 304 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 AACSQ86V21 672 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 SLC12A7Q9Y666 1083 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 NDUFAB1O14561 156 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 RNF8O76064 485 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 ZNF131P52739 623 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 EXOC1Q9NV70 894 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 DEUP1Q05D60 604 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 SSRP1Q08945 709 aaKnown RBP6.18□□□□□ -1.42
XRN1-201ENST00000264951 MAP3K12Q12852 859 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 STK24Q9Y6E0 443 aa6.18□□□□□ -1.42
XRN1-201ENST00000264951 RNASELQ05823 741 aaKnown RBP6.18□□□□□ -1.42
XRN1-201ENST00000264951 TACO1Q9BSH4 297 aaKnown RBP6.18□□□□□ -1.42
XRN1-201ENST00000264951 UBASH3AP57075 661 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 BICD1Q96G01 975 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 NAP1L4Q99733 375 aaKnown RBP6.17□□□□□ -1.42
XRN1-201ENST00000264951 ELP1O95163 1332 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 APBA1Q02410 837 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 CCDC42Q96M95 316 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 PFDN4Q9NQP4 134 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 TTF2Q9UNY4 1162 aaKnown RBP6.17□□□□□ -1.42
XRN1-201ENST00000264951 SATB2Q9UPW6 733 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 HSPA8P11142 646 aaKnown RBP6.17□□□□□ -1.42
XRN1-201ENST00000264951 IGHMBP2P38935 993 aaKnown RBP6.17□□□□□ -1.42
XRN1-201ENST00000264951 SDCCAG8Q86SQ7 713 aaPredicted RBP6.17□□□□□ -1.42
XRN1-201ENST00000264951 PDCD7Q8N8D1 485 aaKnown RBP6.17□□□□□ -1.42
XRN1-201ENST00000264951 DRC1Q96MC2 740 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 ZC4H2Q9NQZ6 224 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 CACYBPQ9HB71 228 aaKnown RBP6.17□□□□□ -1.42
XRN1-201ENST00000264951 GIPC1O14908 333 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 SRGAP3O43295 1099 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 HIP1RO75146 1068 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 IFT20Q8IY31 132 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 CCDC144CPQ8IYA2 1237 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 NAPBQ9H115 298 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 CCDC65Q8IXS2 484 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 TRIM47Q96LD4 638 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 PARP2Q9UGN5 583 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 I3L4J1 428 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 MSH5O43196 834 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 MAIP1Q8WWC4 291 aa6.17□□□□□ -1.42
XRN1-201ENST00000264951 TBC1D31Q96DN5 1066 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms