RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 CARD14Q9BXL6 1004 aa9.11□□□□□ -0.95
SMARCE1-201ENST00000264640 MCOLN1Q9GZU1 580 aa9.11□□□□□ -0.95
SMARCE1-201ENST00000264640 BCORQ6W2J9 1755 aa9.11□□□□□ -0.95
SMARCE1-201ENST00000264640 LTBP3Q9NS15 1303 aa9.1□□□□□ -0.95
SMARCE1-201ENST00000264640 EPHX2P34913 555 aa9.1□□□□□ -0.95
SMARCE1-201ENST00000264640 TNNT2P45379 298 aaPredicted RBP9.1□□□□□ -0.95
SMARCE1-201ENST00000264640 CYP4F22Q6NT55 531 aa9.1□□□□□ -0.95
SMARCE1-201ENST00000264640 CNTROBQ8N137 903 aa9.1□□□□□ -0.95
SMARCE1-201ENST00000264640 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.1□□□□□ -0.95
SMARCE1-201ENST00000264640 ARHGAP33O14559 1287 aa9.09□□□□□ -0.95
SMARCE1-201ENST00000264640 AOC2O75106 756 aa9.09□□□□□ -0.95
SMARCE1-201ENST00000264640 CYP19A1P11511 503 aaPredicted RBP9.09□□□□□ -0.95
SMARCE1-201ENST00000264640 PLEKHO1Q53GL0 409 aaPredicted RBP9.09□□□□□ -0.95
SMARCE1-201ENST00000264640 C1orf141Q5JVX7 400 aa9.09□□□□□ -0.95
SMARCE1-201ENST00000264640 TBC1D9BQ66K14 1250 aa9.09□□□□□ -0.95
SMARCE1-201ENST00000264640 PRPF40BQ6NWY9 871 aaKnown RBP9.09□□□□□ -0.95
SMARCE1-201ENST00000264640 AEBP1Q8IUX7 1158 aa9.09□□□□□ -0.95
SMARCE1-201ENST00000264640 POLKQ9UBT6 870 aa9.09□□□□□ -0.95
SMARCE1-201ENST00000264640 HACL1Q9UJ83 578 aa9.09□□□□□ -0.95
SMARCE1-201ENST00000264640 CANXP27824 592 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-201ENST00000264640 SOX10P56693 466 aa9.08□□□□□ -0.96
SMARCE1-201ENST00000264640 FOXK1P85037 733 aa9.08□□□□□ -0.96
SMARCE1-201ENST00000264640 SLC39A6Q13433 755 aa9.08□□□□□ -0.96
SMARCE1-201ENST00000264640 DGKZQ13574 1117 aa9.08□□□□□ -0.96
SMARCE1-201ENST00000264640 PRR5LQ6MZQ0 368 aa9.08□□□□□ -0.96
SMARCE1-201ENST00000264640 ADGRD1Q6QNK2 874 aa9.08□□□□□ -0.96
SMARCE1-201ENST00000264640 GPR101Q96P66 508 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-201ENST00000264640 ZNF277Q9NRM2 450 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-201ENST00000264640 PPP2R1AP30153 589 aa9.07□□□□□ -0.96
SMARCE1-201ENST00000264640 PDE6BP35913 854 aa9.07□□□□□ -0.96
SMARCE1-201ENST00000264640 OLFM4Q6UX06 510 aa9.07□□□□□ -0.96
SMARCE1-201ENST00000264640 BRIP1Q9BX63 1249 aa9.07□□□□□ -0.96
SMARCE1-201ENST00000264640 DDX21Q9NR30 783 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMARCE1-201ENST00000264640 MRC1P22897 1456 aa9.07□□□□□ -0.96
SMARCE1-201ENST00000264640 TRAF5O00463 557 aa9.06□□□□□ -0.96
SMARCE1-201ENST00000264640 TCERG1O14776 1098 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-201ENST00000264640 NPHP1O15259 732 aa9.06□□□□□ -0.96
SMARCE1-201ENST00000264640 ANP32AP39687 249 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-201ENST00000264640 ECE1P42892 770 aa9.06□□□□□ -0.96
SMARCE1-201ENST00000264640 AMER1Q5JTC6 1135 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-201ENST00000264640 HCSTQ9UBK5 93 aa9.06□□□□□ -0.96
SMARCE1-201ENST00000264640 ZNF330Q9Y3S2 320 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-201ENST00000264640 COL4A5P29400 1685 aa9.06□□□□□ -0.96
SMARCE1-201ENST00000264640 TK2O00142 265 aa9.05□□□□□ -0.96
SMARCE1-201ENST00000264640 AMOTQ4VCS5 1084 aa9.05□□□□□ -0.96
SMARCE1-201ENST00000264640 PNMA8AQ86V59 439 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-201ENST00000264640 CNBD1Q8NA66 436 aa9.05□□□□□ -0.96
SMARCE1-201ENST00000264640 CNKSR1Q969H4 720 aa9.05□□□□□ -0.96
SMARCE1-201ENST00000264640 GPHNQ9NQX3 736 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-201ENST00000264640 AKAP11Q9UKA4 1901 aa9.04□□□□□ -0.96
SMARCE1-201ENST00000264640 HRO43593 1189 aa9.04□□□□□ -0.96
SMARCE1-201ENST00000264640 SRGNP10124 158 aa9.04□□□□□ -0.96
SMARCE1-201ENST00000264640 MS4A1P11836 297 aa9.04□□□□□ -0.96
SMARCE1-201ENST00000264640 CCDC93Q567U6 631 aa9.04□□□□□ -0.96
SMARCE1-201ENST00000264640 CST9Q5W186 159 aa9.04□□□□□ -0.96
SMARCE1-201ENST00000264640 STYK1Q6J9G0 422 aa9.04□□□□□ -0.96
SMARCE1-201ENST00000264640 PLPP6Q8IY26 295 aa9.04□□□□□ -0.96
SMARCE1-201ENST00000264640 SLC52A2Q9HAB3 445 aa9.04□□□□□ -0.96
SMARCE1-201ENST00000264640 LGR6Q9HBX8 967 aa9.04□□□□□ -0.96
SMARCE1-201ENST00000264640 TBC1D2BQ9UPU7 963 aa9.04□□□□□ -0.96
SMARCE1-201ENST00000264640 SALL2Q9Y467 1007 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-201ENST00000264640 GJA3Q9Y6H8 435 aa9.04□□□□□ -0.96
SMARCE1-201ENST00000264640 SIPA1L3O60292 1781 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-201ENST00000264640 FKBP4Q02790 459 aaKnown RBP eCLIP9.03□□□□□ -0.96
SMARCE1-201ENST00000264640 SOGA3Q5TF21 947 aa9.03□□□□□ -0.96
SMARCE1-201ENST00000264640 PRPF38BQ5VTL8 546 aaKnown RBP9.03□□□□□ -0.96
SMARCE1-201ENST00000264640 MASTLQ96GX5 879 aa9.03□□□□□ -0.96
SMARCE1-201ENST00000264640 ADAMTS8Q9UP79 889 aa9.03□□□□□ -0.96
SMARCE1-201ENST00000264640 PDZRN3Q9UPQ7 1066 aa9.03□□□□□ -0.96
SMARCE1-201ENST00000264640 TLL2Q9Y6L7 1015 aa9.03□□□□□ -0.96
SMARCE1-201ENST00000264640 EIF5P55010 431 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-201ENST00000264640 ST5P78524 1137 aa9.02□□□□□ -0.97
SMARCE1-201ENST00000264640 DMRTA1Q5VZB9 504 aa9.02□□□□□ -0.97
SMARCE1-201ENST00000264640 CIAPIN1Q6FI81 312 aa9.02□□□□□ -0.97
SMARCE1-201ENST00000264640 SULT6B1Q6IMI4 303 aa9.02□□□□□ -0.97
SMARCE1-201ENST00000264640 HS6ST3Q8IZP7 471 aa9.02□□□□□ -0.97
SMARCE1-201ENST00000264640 GPC2Q8N158 579 aa9.02□□□□□ -0.97
SMARCE1-201ENST00000264640 C7orf43Q8WVR3 580 aa9.02□□□□□ -0.97
SMARCE1-201ENST00000264640 PLA2G2EQ9NZK7 142 aa9.02□□□□□ -0.97
SMARCE1-201ENST00000264640 FZD9O00144 591 aa9.01□□□□□ -0.97
SMARCE1-201ENST00000264640 LMOD1P29536 600 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-201ENST00000264640 MAP2K2P36507 400 aa9.01□□□□□ -0.97
SMARCE1-201ENST00000264640 IARSP41252 1262 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-201ENST00000264640 EPS15P42566 896 aa9.01□□□□□ -0.97
SMARCE1-201ENST00000264640 DSG2Q14126 1118 aa9.01□□□□□ -0.97
SMARCE1-201ENST00000264640 EXOC6Q8TAG9 804 aa9.01□□□□□ -0.97
SMARCE1-201ENST00000264640 CFAP53Q96M91 514 aa9.01□□□□□ -0.97
SMARCE1-201ENST00000264640 ZIC5Q96T25 663 aa9.01□□□□□ -0.97
SMARCE1-201ENST00000264640 SETDB2Q96T68 719 aa9.01□□□□□ -0.97
SMARCE1-201ENST00000264640 A0A087WZG4 1122 aa9□□□□□ -0.97
SMARCE1-201ENST00000264640 E9PSI1 815 aa9□□□□□ -0.97
SMARCE1-201ENST00000264640 RNMTO43148 476 aaKnown RBP9□□□□□ -0.97
SMARCE1-201ENST00000264640 CA12O43570 354 aa9□□□□□ -0.97
SMARCE1-201ENST00000264640 PSEN2P49810 448 aa9□□□□□ -0.97
SMARCE1-201ENST00000264640 SCNN1DP51172 638 aa9□□□□□ -0.97
SMARCE1-201ENST00000264640 SYNE4Q8N205 404 aa9□□□□□ -0.97
SMARCE1-201ENST00000264640 ZNF408Q9H9D4 720 aa9□□□□□ -0.97
SMARCE1-201ENST00000264640 POLR2AP24928 1970 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-201ENST00000264640 CAMTA2O94983 1202 aa8.99□□□□□ -0.97
SMARCE1-201ENST00000264640 CELF2O95319 508 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms